4-648018-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648018
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648018
    reference: chr 4
allele count: 16
allele frequency: 3.536380514543365e-4
allele num: 45244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.572G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+75G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.400G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-258C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+75G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+75G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+75G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.453G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+75G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-16C>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15261
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20835
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5180
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

4-648026-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648026
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648025
    reference: chr 4
allele count: 1
allele frequency: 2.662690382362339e-5
allele num: 37556
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+84delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.462delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+84delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-25delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+84delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.409delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-267delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+84delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.581delA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+84delA
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11774
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3607
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: TA
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

4-648027-A-AGGGGTGGGGTTTAGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648027
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648042
    reference: chr 4
allele count: 1
allele frequency: 2.738375595596692e-5
allele num: 36518
alternate allele: AGGGGTGGGGTTTAGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 19877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/4-648027-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648027
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648027
    reference: chr 4
allele count: 1
allele frequency: 2.738375595596692e-5
allele num: 36518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-267T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.462A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.409A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.581A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+84A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+84A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-25T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+84A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+84A>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+84A>C
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 19877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11296
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21234
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

4-648028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648028
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648028
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 35564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+85G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+85G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+85G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.463G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+85G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.410G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-268C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.582G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-26C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+85G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20451
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

4-648057-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648057
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648057
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 15144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+114C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+114C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-55G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+114C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-297G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.611C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+114C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+114C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.492C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.439C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8627
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

4-648058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648058
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648058
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 15158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+115C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+115C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+115C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-56G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-298G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+115C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.612C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.440C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+115C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.493C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

4-648059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648059
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648059
    reference: chr 4
allele count: 1
allele frequency: 6.59108884787767e-5
allele num: 15172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.494G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-299C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-57C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+116G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+116G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.613G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+116G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.441G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+116G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+116G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8392
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35387
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-648059-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648059
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648059
    reference: chr 4
allele count: 1
allele frequency: 6.59108884787767e-5
allele num: 15172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.441G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+116G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-57C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+116G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+116G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+116G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.494G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+116G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.613G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-299C>A
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

4-648062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648062
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648062
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 13996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+119G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+119G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.616G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+119G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.497G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+119G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+119G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-60C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.444G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-302C>T
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34995
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

4-648070-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648070
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648070
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 13012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+127G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-310C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.452G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-68C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.624G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.505G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+127G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+127G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+127G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+127G>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34378
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/4-648076-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648076
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648076
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 12596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+133C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.630C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-316G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+133C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+133C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+133C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.458C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-74G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000474251
  gene symbol: PDE6B
  hgvsc: ENST00000474251.1:n.511C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+133C>A
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 33118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

4-648085-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648085
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648085
    reference: chr 4
allele count: 1
allele frequency: 8.301510874979246e-5
allele num: 12046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.467G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+142G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+142G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+142G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+142G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+142G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.639G>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-325C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-83C>A
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27831
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

4-648141-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648141
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648141
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 7448
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-139G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.523C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.695C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+198C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-381G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+198C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+198C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+198C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+198C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15772
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

4-648143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648143
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648143
    reference: chr 4
allele count: 1
allele frequency: 1.369487811558477e-4
allele num: 7302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-383G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+200C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+200C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.697C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-141G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.525C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+200C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+200C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+200C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13599
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

4-648148-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648148
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648148
    reference: chr 4
allele count: 9
allele frequency: 1.318874560375147e-3
allele num: 6824
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+205T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-146A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.530T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+205T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-388A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+205T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+205T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+205T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.702T>C
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14224
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

4-648156-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648156
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648156
    reference: chr 4
allele count: 5
allele frequency: 8.570449091532396e-4
allele num: 5834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+213G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+213G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.710G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-396C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+213G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000467152
  gene symbol: PDE6B
  hgvsc: ENST00000467152.1:n.538G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+213G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-154C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+213G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2102
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

4-648179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648179
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648179
    reference: chr 4
allele count: 3
allele frequency: 9.253547193090684e-4
allele num: 3242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.90+236C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.565-177G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.90+236C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.927+236C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133256
  ensembl transcript: ENST00000476034
  gene symbol: PDE6B
  hgvsc: ENST00000476034.1:n.733C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.927+236C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.397-419G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.90+236C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
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genotype depth: GenotypeDepth
  all individuals: 1529
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 12512
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 81
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genotype quality: GenotypeQuality
  all individuals: 9
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2894
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 512
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 254
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genotype quality: GenotypeQuality
  all individuals: 691
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

4-648566-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648566
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648566
    reference: chr 4
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+305G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-47C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+305G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-47C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-47C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-47C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-47C>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 431
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3435
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 22291
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4560
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 316
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

4-648567-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648567
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648567
    reference: chr 4
allele count: 2
allele frequency: 1.652919882973272e-5
allele num: 120998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-46A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-46A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-46A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+304T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-46A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-46A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+304T>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22294
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

4-648571-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648571
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648571
    reference: chr 4
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+300G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+300G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-42C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22313
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 280
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genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 157
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 58489
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

4-648581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648581
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648581
    reference: chr 4
allele count: 1
allele frequency: 8.329446258412741e-6
allele num: 120056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-32C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-32C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+290G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+290G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-32C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-32C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-32C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 170
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 200
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genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

4-648583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648583
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648583
    reference: chr 4
allele count: 1
allele frequency: 8.34153584357952e-6
allele num: 119882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-30G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+288C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-30G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+288C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-30G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-30G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-30G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

4-648584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648584
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648584
    reference: chr 4
allele count: 1
allele frequency: 8.341118377152009e-6
allele num: 119888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-29C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-29C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-29C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-29C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-29C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+287G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+287G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22431
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-648586-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648586
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648586
    reference: chr 4
allele count: 14
allele frequency: 1.156203029251937e-4
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+285G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-27C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-27C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-27C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-27C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-27C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+285G>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22490
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-648589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648589
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648589
    reference: chr 4
allele count: 1
allele frequency: 8.340979230961715e-6
allele num: 119890
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-24C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-24C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-24C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+282G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+282G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-24C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-24C>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

4-648589-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648589
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648589
    reference: chr 4
allele count: 37
allele frequency: 3.086162315455834e-4
allele num: 119890
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-24C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-24C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-24C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-24C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-24C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+282G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+282G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22511
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58159
  bin: 9.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

4-648590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648590
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648590
    reference: chr 4
allele count: 19
allele frequency: 1.569236360032376e-4
allele num: 121078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+281C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-23G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-23G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-23G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-23G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-23G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+281C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22518
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58757
  bin: 9.75e1
  variant carriers: 18
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

4-648593-C-CAAGCAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648593
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648600
    reference: chr 4
allele count: 1
allele frequency: 8.341953351796856e-6
allele num: 119876
alternate allele: CAAGCAGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-19_91-18insAGCAGAA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-19_91-18insAGCAGAA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-19_928-18insAGCAGAA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-19_928-18insAGCAGAA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-19_91-18insAGCAGAA
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22513
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58159
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

4-648595-G-GTGTCTTCTGCTTCTCAGGAAAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648595
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648617
    reference: chr 4
allele count: 606
allele frequency: 5.005947660586836e-3
allele num: 121056
alternate allele: GTGTCTTCTGCTTCTCAGGAAAT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsp: ENSP00000420295.1:p.Tyr314CysfsTer50
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsp: ENSP00000418256.1:p.Tyr35CysfsTer48
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsp: ENSP00000255622.6:p.Tyr314CysfsTer50
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsp: ENSP00000406334.2:p.Tyr35CysfsTer50
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsp: ENSP00000418454.1:p.Tyr35CysfsTer?
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 9.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 7.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 8.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 5.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 7.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 22229
  bin: 9.75e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 6.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 8.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58761
  bin: 9.75e1
  variant carriers: 602
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 5
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

4-648604-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648604
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648604
    reference: chr 4
allele count: 3
allele frequency: 2.477414240177052e-5
allele num: 121094
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-9G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-9G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+267C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-9G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-9G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+267C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-9G>C
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22500
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58750
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-648606-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648606
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648606
    reference: chr 4
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-7T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-7T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-7T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+265A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-7T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-7T>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+265A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22499
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58750
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.928-7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

4-648608-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648608
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648608
    reference: chr 4
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.928-5C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.928-5C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+263G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.91-5C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.91-5C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+263G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.91-5C>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22500
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.928-5C>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-648621-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648621
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648621
    reference: chr 4
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.936C>G
  hgvsp: ENST00000496514.1:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.99C>G
  hgvsp: ENST00000487902.1:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+250G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.936C>G
  hgvsp: ENST00000255622.6:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.99C>G
  hgvsp: ENST00000429163.2:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.99C>G
  hgvsp: ENST00000465426.1:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+250G>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22499
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val312Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-648621-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648621
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648621
    reference: chr 4
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.99C>T
  hgvsp: ENST00000487902.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+250G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+250G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.99C>T
  hgvsp: ENST00000429163.2:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.936C>T
  hgvsp: ENST00000496514.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.936C>T
  hgvsp: ENST00000255622.6:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.99C>T
  hgvsp: ENST00000465426.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58750
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val312Val
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

4-648624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648624
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648624
    reference: chr 4
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.939C>T
  hgvsp: ENST00000255622.6:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.102C>T
  hgvsp: ENST00000465426.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+247G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.102C>T
  hgvsp: ENST00000487902.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.939C>T
  hgvsp: ENST00000496514.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.102C>T
  hgvsp: ENST00000429163.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+247G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22499
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58750
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe313Phe
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

4-648631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648631
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648631
    reference: chr 4
allele count: 4
allele frequency: 3.32883940014314e-5
allele num: 120162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.109G>A
  hgvsp: ENSP00000406334.2:p.Val37Met
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.946G>A
  hgvsp: ENSP00000420295.1:p.Val316Met
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+240C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.109G>A
  hgvsp: ENSP00000418256.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.109G>A
  hgvsp: ENSP00000418454.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.946G>A
  hgvsp: ENSP00000255622.6:p.Val316Met
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+240C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22515
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val316Met
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

4-648640-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648640
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648640
    reference: chr 4
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.118T>G
  hgvsp: ENSP00000418256.1:p.Tyr40Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.118T>G
  hgvsp: ENSP00000406334.2:p.Tyr40Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.955T>G
  hgvsp: ENSP00000255622.6:p.Tyr319Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+231A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+231A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.118T>G
  hgvsp: ENSP00000418454.1:p.Tyr40Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.955T>G
  hgvsp: ENSP00000420295.1:p.Tyr319Asp
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22529
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58515
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr319Asp
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

4-648641-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648641
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648641
    reference: chr 4
allele count: 1
allele frequency: 8.280339162692104e-6
allele num: 120768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.119A>G
  hgvsp: ENSP00000418454.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+230T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+230T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.956A>G
  hgvsp: ENSP00000255622.6:p.Tyr319Cys
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.119A>G
  hgvsp: ENSP00000418256.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.956A>G
  hgvsp: ENSP00000420295.1:p.Tyr319Cys
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.119A>G
  hgvsp: ENSP00000406334.2:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr319Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-648642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648642
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648642
    reference: chr 4
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.120C>T
  hgvsp: ENST00000487902.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.957C>T
  hgvsp: ENST00000255622.6:c.957C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.120C>T
  hgvsp: ENST00000465426.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+229G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.120C>T
  hgvsp: ENST00000429163.2:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+229G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.957C>T
  hgvsp: ENST00000496514.1:c.957C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22508
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr319Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

4-648643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648643
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648643
    reference: chr 4
allele count: 121243
allele frequency: 9.997443804937579e-1
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.121G>A
  hgvsp: ENSP00000406334.2:p.Val41Ile
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.958G>A
  hgvsp: ENSP00000255622.6:p.Val320Ile
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418454
  ensembl transcript: ENST00000465426
  gene symbol: PDE6B
  hgvsc: ENST00000465426.1:c.121G>A
  hgvsp: ENSP00000418454.1:p.Val41Ile
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+228C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.958G>A
  hgvsp: ENSP00000420295.1:p.Val320Ile
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+228C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.121G>A
  hgvsp: ENSP00000418256.1:p.Val41Ile
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 7.25e1
  variant carriers: 1568
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.25e1
  variant carriers: 796
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.75e1
  variant carriers: 1946
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.25e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 8.25e1
  variant carriers: 2345
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.75e1
  variant carriers: 306
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 9.25e1
  variant carriers: 2936
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 1205
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 8.75e1
  variant carriers: 2771
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 340
genotype depth: GenotypeDepth
  all individuals: 44353
  bin: 9.75e1
  variant carriers: 44353
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 577
genotype quality: GenotypeQuality
  all individuals: 59979
  bin: 9.75e1
  variant carriers: 59979
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 8.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 23
hgvs: p.Val320Ile
num of homozygotes: 60606
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

4-648651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648651
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648651
    reference: chr 4
allele count: 38
allele frequency: 3.140288245405262e-4
allele num: 121008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.129C>T
  hgvsp: ENST00000487902.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+220G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.129C>T
  hgvsp: ENST00000429163.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.966C>T
  hgvsp: ENST00000255622.6:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+220G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.966C>T
  hgvsp: ENST00000496514.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 11245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His322His
num of homozygotes: 1
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

4-648652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648652
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648652
    reference: chr 4
allele count: 36
allele frequency: 2.975009916699722e-4
allele num: 121008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.130G>A
  hgvsp: ENSP00000418256.1:p.Gly44Ser
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+219C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.967G>A
  hgvsp: ENSP00000255622.6:p.Gly323Ser
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.130G>A
  hgvsp: ENSP00000406334.2:p.Gly44Ser
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.967G>A
  hgvsp: ENSP00000420295.1:p.Gly323Ser
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+219C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 13997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7520
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly323Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

4-648653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648653
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648653
    reference: chr 4
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+218C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.131G>A
  hgvsp: ENSP00000418256.1:p.Gly44Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.131G>A
  hgvsp: ENSP00000406334.2:p.Gly44Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.968G>A
  hgvsp: ENSP00000255622.6:p.Gly323Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.968G>A
  hgvsp: ENSP00000420295.1:p.Gly323Asp
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+218C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19200
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15299
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly323Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

4-648658-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648658
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648658
    reference: chr 4
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.136G>C
  hgvsp: ENSP00000418256.1:p.Glu46Gln
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.136G>C
  hgvsp: ENSP00000406334.2:p.Glu46Gln
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+213C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.973G>C
  hgvsp: ENSP00000255622.6:p.Glu325Gln
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+213C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.973G>C
  hgvsp: ENSP00000420295.1:p.Glu325Gln
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7531
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5091
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15312
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu325Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

4-648668-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648668
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648668
    reference: chr 4
allele count: 1
allele frequency: 8.267742575567167e-6
allele num: 120952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.146A>G
  hgvsp: ENSP00000418256.1:p.Lys49Arg
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.146A>G
  hgvsp: ENSP00000406334.2:p.Lys49Arg
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.983A>G
  hgvsp: ENSP00000420295.1:p.Lys328Arg
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.983A>G
  hgvsp: ENSP00000255622.6:p.Lys328Arg
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+203T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+203T>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7527
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys328Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/4-648672-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648672
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648672
    reference: chr 4
allele count: 1
allele frequency: 8.269793751343841e-6
allele num: 120922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.150C>A
  hgvsp: ENST00000429163.2:c.150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+199G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.987C>A
  hgvsp: ENST00000255622.6:c.987C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.987C>A
  hgvsp: ENST00000496514.1:c.987C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+199G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.150C>A
  hgvsp: ENST00000487902.1:c.150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19150
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val329Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-648675-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648675
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648675
    reference: chr 4
allele count: 2
allele frequency: 1.654287084980728e-5
allele num: 120898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.153T>C
  hgvsp: ENST00000429163.2:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+196A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+196A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.153T>C
  hgvsp: ENST00000487902.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.990T>C
  hgvsp: ENST00000496514.1:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.990T>C
  hgvsp: ENST00000255622.6:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: c.990T>C
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-648683-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648683
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648683
    reference: chr 4
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+6T>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+188A>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+6T>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+6T>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+6T>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+188A>T
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5069
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: c.992+6T>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

4-648697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648697
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648697
    reference: chr 4
allele count: 1
allele frequency: 8.289674381590291e-6
allele num: 120632
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+20A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+20A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+174T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+20A>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+174T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+20A>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 14805
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 19112
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5026
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

4-648698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648698
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648698
    reference: chr 4
allele count: 20
allele frequency: 1.65812731101494e-4
allele num: 120618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+21G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+21G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+173C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+21G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+21G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+173C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13769
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
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genotype depth: GenotypeDepth
  all individuals: 10930
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
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  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1226
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  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2589
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 342
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genotype depth: GenotypeDepth
  all individuals: 1800
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genotype depth: GenotypeDepth
  all individuals: 466
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genotype depth: GenotypeDepth
  all individuals: 275
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
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genotype quality: GenotypeQuality
  all individuals: 514
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3470
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 19115
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 206
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genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

4-648702-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648702
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648702
    reference: chr 4
allele count: 1
allele frequency: 8.296827293243064e-6
allele num: 120528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+25C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+25C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+25C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+25C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+169G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+169G>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6756
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 13603
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genotype depth: GenotypeDepth
  all individuals: 196
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5000
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

4-648702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648702
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648702
    reference: chr 4
allele count: 2
allele frequency: 1.659365458648613e-5
allele num: 120528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+25C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+25C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+25C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+169G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+25C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+169G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7259
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

4-648703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648703
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648703
    reference: chr 4
allele count: 2
allele frequency: 1.659943893896386e-5
allele num: 120486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+26G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+168C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+26G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+168C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+26G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+26G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 10821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13471
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

4-648708-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648708
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648708
    reference: chr 4
allele count: 6
allele frequency: 4.985210542058559e-5
allele num: 120356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+31C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+163G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+163G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+31C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+31C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+31C>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 19076
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

4-648708-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648708
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648708
    reference: chr 4
allele count: 7
allele frequency: 5.816078965734986e-5
allele num: 120356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+163G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+31C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+163G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+31C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+31C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+31C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10700
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

4-648709-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648709
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648709
    reference: chr 4
allele count: 3
allele frequency: 2.494678020223523e-5
allele num: 120256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+32G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+162C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+162C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+32G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+32G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+32G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23830
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6465
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS

4-648709-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648709
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648709
    reference: chr 4
allele count: 14513
allele frequency: 1.206842070250133e-1
allele num: 120256
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+162C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+32G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+32G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+162C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+32G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+32G>C
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 2.25e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 2.75e1
  variant carriers: 685
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 503
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 310
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 4.75e1
  variant carriers: 1675
genotype depth: GenotypeDepth
  all individuals: 9291
  bin: 3.75e1
  variant carriers: 1586
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 1542
genotype depth: GenotypeDepth
  all individuals: 13121
  bin: 3.25e1
  variant carriers: 1133
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.25e1
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.75e1
  variant carriers: 654
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 992
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 5.75e1
  variant carriers: 1190
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 4.25e1
  variant carriers: 1686
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 9.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 7.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 12585
  bin: 6.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6465
  bin: 6.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 8.25e1
  variant carriers: 44
num of homozygotes: 1075
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

4-648710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648710
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648710
    reference: chr 4
allele count: 21
allele frequency: 1.746361746361746e-4
allele num: 120250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+33G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+161C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+33G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+161C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+33G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+33G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15376
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9784
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5354
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4509
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

4-648714-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648714
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648714
    reference: chr 4
allele count: 1
allele frequency: 8.324176738920521e-6
allele num: 120132
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+37A>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+157T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+37A>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+157T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+37A>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+37A>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7808
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

4-648719-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648719
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648719
    reference: chr 4
allele count: 7
allele frequency: 5.834013968296301e-5
allele num: 119986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+152G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+152G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+42C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+42C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13167
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

4-648720-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648720
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648720
    reference: chr 4
allele count: 7
allele frequency: 5.837808986889949e-5
allele num: 119908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+43C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+43C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+151G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+151G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+43C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+43C>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1956
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7234
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

4-648720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648720
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648720
    reference: chr 4
allele count: 15
allele frequency: 1.250959068619275e-4
allele num: 119908
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+151G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+43C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+151G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+43C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+43C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+43C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4169
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12909
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7234
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1956
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12286
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13387
  bin: 9.75e1
  variant carriers: 15
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

4-648723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648723
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648723
    reference: chr 4
allele count: 1
allele frequency: 8.348917980229763e-6
allele num: 119776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+46C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+148G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+46C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+148G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+46C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+46C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2420
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 45
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

4-648724-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 648724
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 648724
    reference: chr 4
allele count: 1
allele frequency: 8.351288603831571e-6
allele num: 119742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.155+47C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.992+47C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.155+47C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000468356
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000468356.1:n.564+147G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000242686
  ensembl transcript: ENST00000489312
  gene symbol: RP11-1191J2.2
  hgvsc: ENST00000489312.1:n.396+147G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.992+47C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

4-649678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649678
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649678
    reference: chr 4
allele count: 1
allele frequency: 8.332222370350619e-6
allele num: 120016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-51G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-51G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-51G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-51G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8333
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4680
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14716
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

4-649679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649679
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649679
    reference: chr 4
allele count: 11
allele frequency: 9.164986419156488e-5
allele num: 120022
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-50C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-50C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-50C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-50C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18553
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 490
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14705
  bin: 9.75e1
  variant carriers: 11
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

4-649680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649680
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649680
    reference: chr 4
allele count: 7
allele frequency: 5.83381948495708e-5
allele num: 119990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-49G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-49G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-49G>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-49G>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15789
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-649680-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649680
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649680
    reference: chr 4
allele count: 335
allele frequency: 2.791899324943745e-3
allele num: 119990
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-49G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-49G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-49G>C
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-49G>C
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14133
  bin: 3.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15789
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 978
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  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7366
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
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  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3461
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 265
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14766
  bin: 9.75e1
  variant carriers: 327
num of homozygotes: 4
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

4-649687-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649687
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649687
    reference: chr 4
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-42C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-42C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-42C>G
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-42C>G
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8476
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4595
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/4-649692-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649692
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649692
    reference: chr 4
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-37C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-37C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-37C>A
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-37C>A
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4559
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

4-649692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 649692
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 649692
    reference: chr 4
allele count: 22
allele frequency: 1.832508704416346e-4
allele num: 120054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000255622
  ensembl transcript: ENST00000255622
  gene symbol: PDE6B
  hgvsc: ENST00000255622.6:c.993-37C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000418256
  ensembl transcript: ENST00000487902
  gene symbol: PDE6B
  hgvsc: ENST00000487902.1:c.156-37C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000406334
  ensembl transcript: ENST00000429163
  gene symbol: PDE6B
  hgvsc: ENST00000429163.2:c.156-37C>T
  variant of: http://identifiers.org/hgnc/8786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133256
  ensembl protein: ENSP00000420295
  ensembl transcript: ENST00000496514
  gene symbol: PDE6B
  hgvsc: ENST00000496514.1:c.993-37C>T
  variant of: http://identifiers.org/hgnc/8786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 2
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 1576
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16470
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.75e1
variant carriers: 16

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2604
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 4.784688995215311e-3
allele num: 3344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.152e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.47e-2

DP
type: SiteQuality
SIO_000300: 5.88433e5

VQSLOD
type: SiteQuality
SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 6.023e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

GenotypeQuality
all individuals: 175
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 20546
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25969
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.025125628140704e-4
allele num: 1990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQ
type: SiteQuality
SIO_000300: 6.09e1

DP
type: SiteQuality
SIO_000300: 5.36712e5

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.18e-2

QD
type: SiteQuality
SIO_000300: 1.657e1

GenotypeQuality
all individuals: 25135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
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variant carriers: 0

GenotypeQuality
all individuals: 272
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variant carriers: 0

GenotypeQuality
all individuals: 922
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variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21234
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 1136
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.017708121310808e-4
allele num: 9826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-2

QD
type: SiteQuality
SIO_000300: 6.56e0

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.37e-2

DP
type: SiteQuality
SIO_000300: 5.29106e5

FS
type: SiteQuality
SIO_000300: 1.242e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5055
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.524861878453039e-4
allele num: 1810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 1.242e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.37e-2

DP
type: SiteQuality
SIO_000300: 5.29106e5

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.56e0

GenotypeQuality
all individuals: 60
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24676
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variant carriers: 0

GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21974
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 1

GenotypeQuality
all individuals: 5056
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2594
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1410
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 17942
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.08e0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.42e-2

DP
type: SiteQuality
SIO_000300: 5.21665e5

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.652e0

QD
type: SiteQuality
SIO_000300: 1.003e1

ClippingRankSum
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SIO_000300: 8.76e-1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

DP
type: SiteQuality
SIO_000300: 3.24569e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.22e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.210000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.808e1

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.332e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

FS
type: SiteQuality
SIO_000300: 1.0484e1

QD
type: SiteQuality
SIO_000300: 2.725e1

DP
type: SiteQuality
SIO_000300: 3.23804e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5366
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.271617497456765e-4
allele num: 7864
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 2.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.23218e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.271617497456765e-4
allele num: 7864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-2

QD
type: SiteQuality
SIO_000300: 1.144e1

DP
type: SiteQuality
SIO_000300: 3.23218e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4632
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7714
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

FS
type: SiteQuality
SIO_000300: 2.794e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.48e-2

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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South Asian
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Other
type: Population
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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South Asian
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East Asian
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Latino
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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DP
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: -2.26e-1

QD
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SIO_000300: 1.502e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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QD
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VQSLOD
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SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.24e-2

DP
type: SiteQuality
SIO_000300: 1.18591e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

South Asian
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allele frequency: 2.136752136752137e-4
allele num: 4680
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.14165e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.160000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.02e0

QD
type: SiteQuality
SIO_000300: 8.93e0

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 5.518763796909492e-4
allele num: 1812
num of homozygotes: 0

African
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allele count: 8
allele frequency: 2.941176470588235e-2
allele num: 272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 1.898e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.019999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.05411e5

VQSLOD
type: SiteQuality
SIO_000300: -1.114e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 2
allele frequency: 1.351351351351351e-2
allele num: 148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1494
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 7.81657113079729e-4
allele num: 3838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.87e0

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.210000000000001e-2

DP
type: SiteQuality
SIO_000300: 9.4475e4

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 1

African
type: Population
allele count: 3
allele frequency: 1.973684210526316e-2
allele num: 152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

FS
type: SiteQuality
SIO_000300: 1.124e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.98e-2

DP
type: SiteQuality
SIO_000300: 7.2541e4

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 0.0e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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African
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.012592637223595e-5
allele num: 66388
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.845e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.102e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.418499e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522348069662648e-5
allele num: 65688
num of homozygotes: 0

African
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11516
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQ
type: SiteQuality
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DP
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65552
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.430454e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.951e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.731e1

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58153
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.430668e6

FS
type: SiteQuality
SIO_000300: 2.995e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.646e0

QD
type: SiteQuality
SIO_000300: 1.048e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58740
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.874969711654955e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

FS
type: SiteQuality
SIO_000300: 2.625e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 9.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

DP
type: SiteQuality
SIO_000300: 5.43546e6

QD
type: SiteQuality
SIO_000300: 1.062e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.124448799608035e-5
allele num: 16328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 5.437079e6

FS
type: SiteQuality
SIO_000300: 3.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

QD
type: SiteQuality
SIO_000300: 1.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.897430944562488e-4
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.660433761400726e-4
allele num: 65566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.837334639882411e-4
allele num: 16328
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.08378237441335e-4
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.062e1

FS
type: SiteQuality
SIO_000300: 3.342e0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 5.437079e6

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.106974084218764e-4
allele num: 66446
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.51e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 5.437146e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

FS
type: SiteQuality
SIO_000300: 1.751e0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52545992616774e-5
allele num: 65554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.218e1

QD
type: SiteQuality
SIO_000300: 4.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: -5.351e0

FS
type: SiteQuality
SIO_000300: 5.467e0

DP
type: SiteQuality
SIO_000300: 5.43694e6

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 92
allele frequency: 5.573730764570459e-3
allele num: 16506
num of homozygotes: 1

Latino
type: Population
allele count: 32
allele frequency: 2.766251728907331e-3
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.63618864292589e-3
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.530973451327434e-3
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.511944360447536e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 450
allele frequency: 6.774251821521045e-3
allele num: 66428
num of homozygotes: 4

VQSLOD
type: SiteQuality
SIO_000300: -3.116e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

FS
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

DP
type: SiteQuality
SIO_000300: 5.414746e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.153e0

MQ
type: SiteQuality
SIO_000300: 5.109e1

QD
type: SiteQuality
SIO_000300: 2.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

GenotypeQuality
all individuals: 219
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.513993379476377e-5
allele num: 66460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

MQ
type: SiteQuality
SIO_000300: 5.994e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.62e-1

QD
type: SiteQuality
SIO_000300: 1.135e1

DP
type: SiteQuality
SIO_000300: 5.436848e6

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

DP
type: SiteQuality
SIO_000300: 5.436961e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.122e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

FS
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

GenotypeQuality
all individuals: 367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58750
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10396
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66462
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Other
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allele frequency: 0.0e0
allele num: 906
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South Asian
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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FS
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
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European (Non-Finnish)
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allele frequency: 1.50407604608489e-5
allele num: 66486
num of homozygotes: 0

ClippingRankSum
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QD
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66486
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South Asian
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele num: 10394
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -6.17e-2

FS
type: SiteQuality
SIO_000300: 1.117e0

MQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.108735491753207e-5
allele num: 16370
num of homozygotes: 0

Latino
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allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.041362530413625e-5
allele num: 65760
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.942e0

FS
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 5.438694e6

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503804625703029e-5
allele num: 66498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e0

BaseQRankSum
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SIO_000300: 2.54e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.153e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.510345869204048e-5
allele num: 66210
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.918e1

MQRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -4.52e-1

InbreedingCoeff
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16470
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Latino
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African
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Other
type: Population
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allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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variant carriers: 35

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 90

African
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allele frequency: 9.972120746010382e-1
allele num: 10402
num of homozygotes: 5172

European (Non-Finnish)
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allele frequency: 1.0e0
allele num: 66616
num of homozygotes: 33308

South Asian
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allele frequency: 1.0e0
allele num: 16512
num of homozygotes: 8256

Latino
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allele count: 11572
allele frequency: 9.998271988940729e-1
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Other
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allele frequency: 1.0e0
allele num: 906
num of homozygotes: 453

East Asian
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allele count: 8650
allele frequency: 1.0e0
allele num: 8650
num of homozygotes: 4325

European (Finnish)
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allele count: 6614
allele frequency: 1.0e0
allele num: 6614
num of homozygotes: 3307

VQSLOD
type: SiteQuality
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MQRankSum
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DP
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 3.63460140537921e-4
allele num: 16508
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African
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allele frequency: 6.745037579495086e-4
allele num: 10378
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Latino
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East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 24
allele frequency: 3.614784468476067e-4
allele num: 66394
num of homozygotes: 0

Other
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19222
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 2093
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.518480585595084e-5
allele num: 66394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 32
allele frequency: 3.700277520814061e-3
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.81e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 2.435445e6

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5090
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505842669557885e-5
allele num: 66408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.865e0

QD
type: SiteQuality
SIO_000300: 1.091e1

DP
type: SiteQuality
SIO_000300: 2.43164e6

GenotypeQuality
all individuals: 19180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2096
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.653e1

FS
type: SiteQuality
SIO_000300: 4.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 2.430002e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.824e0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507159005275056e-5
allele num: 66350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.887e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

DP
type: SiteQuality
SIO_000300: 2.427971e6

QD
type: SiteQuality
SIO_000300: 2.917e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

FS
type: SiteQuality
SIO_000300: 5.243e0

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

GenotypeQuality
all individuals: 3479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5089
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66334
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

DP
type: SiteQuality
SIO_000300: 2.427248e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.111e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

FS
type: SiteQuality
SIO_000300: 8.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

GenotypeQuality
all individuals: 4429
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5086
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15221
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19148
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50779530170984e-5
allele num: 66322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 2.426603e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.084e0

QD
type: SiteQuality
SIO_000300: 1.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15163
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19124
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509206157561123e-5
allele num: 66260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

QD
type: SiteQuality
SIO_000300: 1.516e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 2.423838e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512584704743466e-5
allele num: 66112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.414239e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

FS
type: SiteQuality
SIO_000300: 1.501e0

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.602e0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5022
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601908065915004e-4
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.269082987928479e-4
allele num: 66106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.198e0

DP
type: SiteQuality
SIO_000300: 2.412548e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3080
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variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514554872323024e-5
allele num: 66026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

QD
type: SiteQuality
SIO_000300: 1.338e1

DP
type: SiteQuality
SIO_000300: 2.402831e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14244
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5000
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514554872323024e-5
allele num: 66026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

DP
type: SiteQuality
SIO_000300: 2.402831e6

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

FS
type: SiteQuality
SIO_000300: 6.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

QD
type: SiteQuality
SIO_000300: 1.338e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

GenotypeQuality
all individuals: 4992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19097
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3469
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.030578537442798e-5
allele num: 65994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.21e-1

DP
type: SiteQuality
SIO_000300: 2.397806e6

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.54e-1

FS
type: SiteQuality
SIO_000300: 5.296e0

QD
type: SiteQuality
SIO_000300: 1.493e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.137e0

GenotypeQuality
all individuals: 701
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13260
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.105809506465124e-5
allele num: 65892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.99e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

MQ
type: SiteQuality
SIO_000300: 5.903e1

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 8.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

DP
type: SiteQuality
SIO_000300: 2.38595e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19076
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 13260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.035269835488375e-5
allele num: 65892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

QD
type: SiteQuality
SIO_000300: 1.403e1

MQ
type: SiteQuality
SIO_000300: 5.903e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

FS
type: SiteQuality
SIO_000300: 8.3e-1

DP
type: SiteQuality
SIO_000300: 2.38595e6

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
all individuals: 698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519018106695832e-5
allele num: 65832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.073e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

DP
type: SiteQuality
SIO_000300: 2.361887e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 20

GenotypeQuality
all individuals: 538
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 23830
bin: 9.75e1
variant carriers: 13172

GenotypeQuality
all individuals: 2699
bin: 7.25e1
variant carriers: 27

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1673
bin: 8.75e1
variant carriers: 36

South Asian
type: Population
allele count: 1326
allele frequency: 8.041237113402062e-2
allele num: 16490
num of homozygotes: 72

Latino
type: Population
allele count: 756
allele frequency: 6.567060458651841e-2
allele num: 11512
num of homozygotes: 22

European (Finnish)
type: Population
allele count: 1059
allele frequency: 1.602118003025719e-1
allele num: 6610
num of homozygotes: 74

East Asian
type: Population
allele count: 6
allele frequency: 6.968641114982578e-4
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 2942
allele frequency: 2.856310679611651e-1
allele num: 10300
num of homozygotes: 416

Other
type: Population
allele count: 97
allele frequency: 1.075388026607539e-1
allele num: 902
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 8327
allele frequency: 1.264886377445619e-1
allele num: 65832
num of homozygotes: 486

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 2.361887e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.073e0

QD
type: SiteQuality
SIO_000300: 1.432e1

GenotypeQuality
all individuals: 244
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 9.75e1
variant carriers: 21

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.886748305934547e-4
allele num: 65818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

DP
type: SiteQuality
SIO_000300: 2.155584e6

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5254
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.682e0

FS
type: SiteQuality
SIO_000300: 2.429e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 2.128183e6

MQRankSum
type: SiteQuality
SIO_000300: -9.81e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

QD
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13378
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4453
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.141603437242893e-5
allele num: 65634
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.06e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.189e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.895e0

FS
type: SiteQuality
SIO_000300: 2.843e0

QD
type: SiteQuality
SIO_000300: 2.167e1

DP
type: SiteQuality
SIO_000300: 2.094803e6

GenotypeQuality
all individuals: 3259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13387
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.084840055632823e-4
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 2.08917e6

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.409e1

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.575263077626963e-5
allele num: 65570
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.921129503407984e-4
allele num: 10270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.459839844697889e-4
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.409e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 2.08917e6

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

GenotypeQuality
all individuals: 3099
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13340
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4891
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526344709689236e-5
allele num: 65516
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.074e1

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

DP
type: SiteQuality
SIO_000300: 2.061514e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.583e0

GenotypeQuality
all individuals: 2878
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13338
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3092
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4361
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527043948324833e-5
allele num: 65486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.335e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.425e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

QD
type: SiteQuality
SIO_000300: 8.27e0

DP
type: SiteQuality
SIO_000300: 2.061029e6

GenotypeQuality
all individuals: 308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519202722411279e-5
allele num: 65824
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 2.413521e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

FS
type: SiteQuality
SIO_000300: 6.644e0

QD
type: SiteQuality
SIO_000300: 1.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 4667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.26569376882094e-4
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.038220817889044e-5
allele num: 65828
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.21e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.204e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

DP
type: SiteQuality
SIO_000300: 2.413328e6

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.109360518999073e-4
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.26e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.397e1

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

DP
type: SiteQuality
SIO_000300: 2.413942e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

GenotypeQuality
all individuals: 125
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.077364854599046e-5
allele num: 65818
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.066909343040389e-4
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 321
allele frequency: 3.125e-2
allele num: 10272
num of homozygotes: 4

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.252252252252252e-3
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

FS
type: SiteQuality
SIO_000300: 7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

DP
type: SiteQuality
SIO_000300: 2.413942e6

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

VQSLOD
type: SiteQuality
SIO_000300: -2.384e0

QD
type: SiteQuality
SIO_000300: 6.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 2.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 2.412208e6

GenotypeQuality
all individuals: 14495
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

QD
type: SiteQuality
SIO_000300: 1.254e1

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.209e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 2.145e0

DP
type: SiteQuality
SIO_000300: 2.414884e6