http://identifiers.org/exac.variant/1-3328152-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328152
    reference: chr 1
allele count: 2
allele frequency: 1.662897432486364e-5
allele num: 120272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.818C>A
  hgvsp: ENSP00000425796.1:p.Thr273Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1391C>A
  hgvsp: ENSP00000367643.2:p.Thr464Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1394C>A
  hgvsp: ENSP00000421400.1:p.Thr465Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1391C>A
  hgvsp: ENSP00000270722.5:p.Thr464Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1391C>A
  hgvsp: ENSP00000405253.2:p.Thr464Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1169C>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1394C>A
  hgvsp: ENSP00000367651.3:p.Thr465Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1394C>A
  hgvsp: ENSP00000426975.1:p.Thr465Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1391C>A
  hgvsp: ENSP00000407968.2:p.Thr464Asn
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr464Asn
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-3328154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328154
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328154
    reference: chr 1
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1393C>T
  hgvsp: ENSP00000367643.2:p.Pro465Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1396C>T
  hgvsp: ENSP00000367651.3:p.Pro466Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1396C>T
  hgvsp: ENSP00000426975.1:p.Pro466Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1396C>T
  hgvsp: ENSP00000421400.1:p.Pro466Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1393C>T
  hgvsp: ENSP00000405253.2:p.Pro465Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1171C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1393C>T
  hgvsp: ENSP00000270722.5:p.Pro465Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.820C>T
  hgvsp: ENSP00000425796.1:p.Pro274Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1393C>T
  hgvsp: ENSP00000407968.2:p.Pro465Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro465Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-3328155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328155
    reference: chr 1
allele count: 2
allele frequency: 1.663008048958957e-5
allele num: 120264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1397C>T
  hgvsp: ENSP00000421400.1:p.Pro466Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1397C>T
  hgvsp: ENSP00000426975.1:p.Pro466Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1394C>T
  hgvsp: ENSP00000367643.2:p.Pro465Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1394C>T
  hgvsp: ENSP00000405253.2:p.Pro465Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.821C>T
  hgvsp: ENSP00000425796.1:p.Pro274Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1394C>T
  hgvsp: ENSP00000270722.5:p.Pro465Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1397C>T
  hgvsp: ENSP00000367651.3:p.Pro466Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1394C>T
  hgvsp: ENSP00000407968.2:p.Pro465Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1172C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro465Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

1-3328158-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328158
    reference: chr 1
allele count: 5
allele frequency: 4.1583499667332e-5
allele num: 120240
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1397G>T
  hgvsp: ENSP00000270722.5:p.Ser466Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1175G>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1397G>T
  hgvsp: ENSP00000405253.2:p.Ser466Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1400G>T
  hgvsp: ENSP00000421400.1:p.Ser467Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1400G>T
  hgvsp: ENSP00000426975.1:p.Ser467Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1397G>T
  hgvsp: ENSP00000367643.2:p.Ser466Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1397G>T
  hgvsp: ENSP00000407968.2:p.Ser466Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.824G>T
  hgvsp: ENSP00000425796.1:p.Ser275Ile
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1400G>T
  hgvsp: ENSP00000367651.3:p.Ser467Ile
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser466Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-3328160-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328160
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328160
    reference: chr 1
allele count: 2
allele frequency: 1.66306336271412e-5
allele num: 120260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1399C>T
  hgvsp: ENSP00000367643.2:p.Pro467Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1399C>T
  hgvsp: ENSP00000407968.2:p.Pro467Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1399C>T
  hgvsp: ENSP00000270722.5:p.Pro467Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1177C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1402C>T
  hgvsp: ENSP00000426975.1:p.Pro468Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1402C>T
  hgvsp: ENSP00000421400.1:p.Pro468Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1402C>T
  hgvsp: ENSP00000367651.3:p.Pro468Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1399C>T
  hgvsp: ENSP00000405253.2:p.Pro467Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.826C>T
  hgvsp: ENSP00000425796.1:p.Pro276Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8808
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro467Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/1-3328172-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328172
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328172
    reference: chr 1
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1414A>C
  hgvsp: ENSP00000421400.1:p.Lys472Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1411A>C
  hgvsp: ENSP00000367643.2:p.Lys471Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1411A>C
  hgvsp: ENSP00000270722.5:p.Lys471Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1411A>C
  hgvsp: ENSP00000407968.2:p.Lys471Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1411A>C
  hgvsp: ENSP00000405253.2:p.Lys471Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.838A>C
  hgvsp: ENSP00000425796.1:p.Lys280Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1414A>C
  hgvsp: ENSP00000367651.3:p.Lys472Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1414A>C
  hgvsp: ENSP00000426975.1:p.Lys472Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1189A>C
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6107
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys471Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

1-3328181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328181
    reference: chr 1
allele count: 2
allele frequency: 1.664696775482346e-5
allele num: 120142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1420C>G
  hgvsp: ENSP00000367643.2:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1423C>G
  hgvsp: ENSP00000421400.1:p.Pro475Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1420C>G
  hgvsp: ENSP00000405253.2:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1198C>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1420C>G
  hgvsp: ENSP00000407968.2:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.847C>G
  hgvsp: ENSP00000425796.1:p.Pro283Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1423C>G
  hgvsp: ENSP00000426975.1:p.Pro475Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1420C>G
  hgvsp: ENSP00000270722.5:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1423C>G
  hgvsp: ENSP00000367651.3:p.Pro475Ala
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5519
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro474Ala
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

1-3328184-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328184
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328184
    reference: chr 1
allele count: 1
allele frequency: 8.336668000533546e-6
allele num: 119952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1426T>C
  hgvsp: ENSP00000421400.1:p.Ser476Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1201T>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1423T>C
  hgvsp: ENSP00000367643.2:p.Ser475Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1426T>C
  hgvsp: ENSP00000367651.3:p.Ser476Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1426T>C
  hgvsp: ENSP00000426975.1:p.Ser476Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1423T>C
  hgvsp: ENSP00000407968.2:p.Ser475Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1423T>C
  hgvsp: ENSP00000270722.5:p.Ser475Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.850T>C
  hgvsp: ENSP00000425796.1:p.Ser284Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1423T>C
  hgvsp: ENSP00000405253.2:p.Ser475Pro
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser475Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

1-3328187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328187
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328187
    reference: chr 1
allele count: 51
allele frequency: 4.245895634220254e-4
allele num: 120116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1429C>T
  hgvsp: ENSP00000367651.3:p.Pro477Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.853C>T
  hgvsp: ENSP00000425796.1:p.Pro285Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1426C>T
  hgvsp: ENSP00000367643.2:p.Pro476Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1426C>T
  hgvsp: ENSP00000407968.2:p.Pro476Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1426C>T
  hgvsp: ENSP00000270722.5:p.Pro476Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1426C>T
  hgvsp: ENSP00000405253.2:p.Pro476Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1204C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1429C>T
  hgvsp: ENSP00000426975.1:p.Pro477Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1429C>T
  hgvsp: ENSP00000421400.1:p.Pro477Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro476Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-3328197-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328197
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328197
    reference: chr 1
allele count: 1
allele frequency: 8.331250520703158e-6
allele num: 120030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1439A>C
  hgvsp: ENSP00000426975.1:p.Asn480Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1214A>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1439A>C
  hgvsp: ENSP00000367651.3:p.Asn480Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.863A>C
  hgvsp: ENSP00000425796.1:p.Asn288Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1436A>C
  hgvsp: ENSP00000405253.2:p.Asn479Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1439A>C
  hgvsp: ENSP00000421400.1:p.Asn480Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1436A>C
  hgvsp: ENSP00000367643.2:p.Asn479Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1436A>C
  hgvsp: ENSP00000407968.2:p.Asn479Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1436A>C
  hgvsp: ENSP00000270722.5:p.Asn479Thr
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6175
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn479Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-3328197-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328197
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328197
    reference: chr 1
allele count: 1
allele frequency: 8.331250520703158e-6
allele num: 120030
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1439A>G
  hgvsp: ENSP00000421400.1:p.Asn480Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1436A>G
  hgvsp: ENSP00000405253.2:p.Asn479Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1436A>G
  hgvsp: ENSP00000270722.5:p.Asn479Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1214A>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1436A>G
  hgvsp: ENSP00000407968.2:p.Asn479Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1436A>G
  hgvsp: ENSP00000367643.2:p.Asn479Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1439A>G
  hgvsp: ENSP00000426975.1:p.Asn480Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.863A>G
  hgvsp: ENSP00000425796.1:p.Asn288Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1439A>G
  hgvsp: ENSP00000367651.3:p.Asn480Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn479Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-3328201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328201
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328201
    reference: chr 1
allele count: 3
allele frequency: 2.500791917440523e-5
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1443C>T
  hgvsp: ENST00000514189.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1440C>T
  hgvsp: ENST00000441472.2:c.1440C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1440C>T
  hgvsp: ENST00000378391.2:c.1440C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.867C>T
  hgvsp: ENST00000509860.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1440C>T
  hgvsp: ENST00000270722.5:c.1440C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1443C>T
  hgvsp: ENST00000511072.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1218C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1440C>T
  hgvsp: ENST00000442529.2:c.1440C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1443C>T
  hgvsp: ENST00000378398.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His480His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-3328202-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328202
    reference: chr 1
allele count: 1
allele frequency: 8.339309838717748e-6
allele num: 119914
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1441G>A
  hgvsp: ENSP00000270722.5:p.Ala481Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1441G>A
  hgvsp: ENSP00000405253.2:p.Ala481Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1444G>A
  hgvsp: ENSP00000426975.1:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1444G>A
  hgvsp: ENSP00000421400.1:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.868G>A
  hgvsp: ENSP00000425796.1:p.Ala290Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1441G>A
  hgvsp: ENSP00000367643.2:p.Ala481Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1441G>A
  hgvsp: ENSP00000407968.2:p.Ala481Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1219G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1444G>A
  hgvsp: ENSP00000367651.3:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Ala481Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

1-3328202-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328202
    reference: chr 1
allele count: 1
allele frequency: 8.339309838717748e-6
allele num: 119914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1441G>T
  hgvsp: ENSP00000407968.2:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1444G>T
  hgvsp: ENSP00000426975.1:p.Ala482Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1219G>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1444G>T
  hgvsp: ENSP00000367651.3:p.Ala482Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1441G>T
  hgvsp: ENSP00000270722.5:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1444G>T
  hgvsp: ENSP00000421400.1:p.Ala482Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.868G>T
  hgvsp: ENSP00000425796.1:p.Ala290Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1441G>T
  hgvsp: ENSP00000405253.2:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1441G>T
  hgvsp: ENSP00000367643.2:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6178
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala481Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3328207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328207
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328207
    reference: chr 1
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1446C>T
  hgvsp: ENST00000442529.2:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.873C>T
  hgvsp: ENST00000509860.1:c.873C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1449C>T
  hgvsp: ENST00000514189.1:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1446C>T
  hgvsp: ENST00000441472.2:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1446C>T
  hgvsp: ENST00000378391.2:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1224C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1449C>T
  hgvsp: ENST00000378398.3:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1449C>T
  hgvsp: ENST00000511072.1:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1446C>T
  hgvsp: ENST00000270722.5:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser482Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-3328215-TCAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328212
    reference: chr 1
allele count: 1
allele frequency: 8.345852111500584e-6
allele num: 119820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1234_1236delAAC
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1459_1461delAAC
  hgvsp: ENSP00000367651.3:p.Asn487del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.883_885delAAC
  hgvsp: ENSP00000425796.1:p.Asn295del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1459_1461delAAC
  hgvsp: ENSP00000426975.1:p.Asn487del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1456_1458delAAC
  hgvsp: ENSP00000270722.5:p.Asn486del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1456_1458delAAC
  hgvsp: ENSP00000405253.2:p.Asn486del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1459_1461delAAC
  hgvsp: ENSP00000421400.1:p.Asn487del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1456_1458delAAC
  hgvsp: ENSP00000367643.2:p.Asn486del
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1456_1458delAAC
  hgvsp: ENSP00000407968.2:p.Asn486del
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5532
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn486del
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: TCAA
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

1-3328216-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328216
    reference: chr 1
allele count: 1
allele frequency: 8.34599142032082e-6
allele num: 119818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1458C>T
  hgvsp: ENST00000378398.3:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1458C>T
  hgvsp: ENST00000514189.1:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1458C>T
  hgvsp: ENST00000511072.1:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1455C>T
  hgvsp: ENST00000442529.2:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.882C>T
  hgvsp: ENST00000509860.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1455C>T
  hgvsp: ENST00000270722.5:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1455C>T
  hgvsp: ENST00000378391.2:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1233C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1455C>T
  hgvsp: ENST00000441472.2:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe485Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-3328218-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328218
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328218
    reference: chr 1
allele count: 1
allele frequency: 8.348220994106157e-6
allele num: 119786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1460A>G
  hgvsp: ENSP00000426975.1:p.Asn487Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1457A>G
  hgvsp: ENSP00000367643.2:p.Asn486Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1235A>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1457A>G
  hgvsp: ENSP00000270722.5:p.Asn486Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1460A>G
  hgvsp: ENSP00000421400.1:p.Asn487Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1460A>G
  hgvsp: ENSP00000367651.3:p.Asn487Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1457A>G
  hgvsp: ENSP00000407968.2:p.Asn486Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.884A>G
  hgvsp: ENSP00000425796.1:p.Asn295Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1457A>G
  hgvsp: ENSP00000405253.2:p.Asn486Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5532
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn486Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-3328219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328219
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328219
    reference: chr 1
allele count: 1
allele frequency: 8.353241893178742e-6
allele num: 119714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1458C>T
  hgvsp: ENST00000442529.2:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1461C>T
  hgvsp: ENST00000514189.1:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1458C>T
  hgvsp: ENST00000378391.2:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1458C>T
  hgvsp: ENST00000270722.5:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1461C>T
  hgvsp: ENST00000511072.1:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1458C>T
  hgvsp: ENST00000441472.2:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1236C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.885C>T
  hgvsp: ENST00000509860.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1461C>T
  hgvsp: ENST00000378398.3:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn486Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-3328222-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328222
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328222
    reference: chr 1
allele count: 2
allele frequency: 1.670760028737073e-5
allele num: 119706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.888G>A
  hgvsp: ENST00000509860.1:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1461G>A
  hgvsp: ENST00000378391.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1461G>A
  hgvsp: ENST00000441472.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1464G>A
  hgvsp: ENST00000514189.1:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1464G>A
  hgvsp: ENST00000378398.3:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1239G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1461G>A
  hgvsp: ENST00000442529.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1464G>A
  hgvsp: ENST00000511072.1:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1461G>A
  hgvsp: ENST00000270722.5:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16654
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5532
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu487Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-3328231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328231
    reference: chr 1
allele count: 3
allele frequency: 2.511132688251247e-5
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1473C>T
  hgvsp: ENST00000514189.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1473C>T
  hgvsp: ENST00000511072.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1470C>T
  hgvsp: ENST00000378391.2:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1470C>T
  hgvsp: ENST00000270722.5:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1473C>T
  hgvsp: ENST00000378398.3:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.897C>T
  hgvsp: ENST00000509860.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1470C>T
  hgvsp: ENST00000442529.2:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1248C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1470C>T
  hgvsp: ENST00000441472.2:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23104
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro490Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

1-3328239-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328239
    reference: chr 1
allele count: 1
allele frequency: 8.387572971884856e-6
allele num: 119224
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1478C>G
  hgvsp: ENSP00000367643.2:p.Pro493Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.905C>G
  hgvsp: ENSP00000425796.1:p.Pro302Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1256C>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1478C>G
  hgvsp: ENSP00000407968.2:p.Pro493Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1481C>G
  hgvsp: ENSP00000367651.3:p.Pro494Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1478C>G
  hgvsp: ENSP00000270722.5:p.Pro493Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1481C>G
  hgvsp: ENSP00000421400.1:p.Pro494Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1478C>G
  hgvsp: ENSP00000405253.2:p.Pro493Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1481C>G
  hgvsp: ENSP00000426975.1:p.Pro494Arg
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro493Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

1-3328239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328239
    reference: chr 1
allele count: 2
allele frequency: 1.677514594376971e-5
allele num: 119224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1481C>T
  hgvsp: ENSP00000367651.3:p.Pro494Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1478C>T
  hgvsp: ENSP00000270722.5:p.Pro493Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1481C>T
  hgvsp: ENSP00000426975.1:p.Pro494Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1478C>T
  hgvsp: ENSP00000407968.2:p.Pro493Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1481C>T
  hgvsp: ENSP00000421400.1:p.Pro494Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1478C>T
  hgvsp: ENSP00000367643.2:p.Pro493Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.905C>T
  hgvsp: ENSP00000425796.1:p.Pro302Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1478C>T
  hgvsp: ENSP00000405253.2:p.Pro493Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1256C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9456
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro493Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

1-3328240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328240
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328240
    reference: chr 1
allele count: 1
allele frequency: 8.391655337931961e-6
allele num: 119166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1479G>A
  hgvsp: ENST00000442529.2:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1479G>A
  hgvsp: ENST00000378391.2:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1479G>A
  hgvsp: ENST00000441472.2:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1257G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1482G>A
  hgvsp: ENST00000514189.1:c.1482G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1479G>A
  hgvsp: ENST00000270722.5:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.906G>A
  hgvsp: ENST00000509860.1:c.906G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1482G>A
  hgvsp: ENST00000378398.3:c.1482G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1482G>A
  hgvsp: ENST00000511072.1:c.1482G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro493Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-3328242-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328242
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328242
    reference: chr 1
allele count: 3
allele frequency: 2.517876926175849e-5
allele num: 119148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.908A>C
  hgvsp: ENSP00000425796.1:p.His303Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1481A>C
  hgvsp: ENSP00000270722.5:p.His494Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1484A>C
  hgvsp: ENSP00000421400.1:p.His495Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1484A>C
  hgvsp: ENSP00000426975.1:p.His495Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1481A>C
  hgvsp: ENSP00000367643.2:p.His494Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1481A>C
  hgvsp: ENSP00000405253.2:p.His494Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1259A>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1481A>C
  hgvsp: ENSP00000407968.2:p.His494Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1484A>C
  hgvsp: ENSP00000367651.3:p.His495Pro
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His494Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

1-3328243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328243
    reference: chr 1
allele count: 1
allele frequency: 8.392641332080031e-6
allele num: 119152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1482C>T
  hgvsp: ENST00000442529.2:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.909C>T
  hgvsp: ENST00000509860.1:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1482C>T
  hgvsp: ENST00000270722.5:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1482C>T
  hgvsp: ENST00000378391.2:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1485C>T
  hgvsp: ENST00000378398.3:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1260C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1482C>T
  hgvsp: ENST00000441472.2:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1485C>T
  hgvsp: ENST00000514189.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1485C>T
  hgvsp: ENST00000511072.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6197
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His494His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

1-3328245-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328245
    reference: chr 1
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1484C>T
  hgvsp: ENSP00000367643.2:p.Pro495Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1484C>T
  hgvsp: ENSP00000407968.2:p.Pro495Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.911C>T
  hgvsp: ENSP00000425796.1:p.Pro304Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1262C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1484C>T
  hgvsp: ENSP00000405253.2:p.Pro495Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1484C>T
  hgvsp: ENSP00000270722.5:p.Pro495Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1487C>T
  hgvsp: ENSP00000421400.1:p.Pro496Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1487C>T
  hgvsp: ENSP00000367651.3:p.Pro496Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1487C>T
  hgvsp: ENSP00000426975.1:p.Pro496Leu
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro495Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ

1-3328246-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328246
    reference: chr 1
allele count: 6
allele frequency: 5.043033889187735e-5
allele num: 118976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1485G>A
  hgvsp: ENST00000378391.2:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1488G>A
  hgvsp: ENST00000511072.1:c.1488G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1485G>A
  hgvsp: ENST00000441472.2:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1485G>A
  hgvsp: ENST00000442529.2:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1263G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.912G>A
  hgvsp: ENST00000509860.1:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1488G>A
  hgvsp: ENST00000378398.3:c.1488G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1485G>A
  hgvsp: ENST00000270722.5:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1488G>A
  hgvsp: ENST00000514189.1:c.1488G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5554
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro495Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-3328252-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328252
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328252
    reference: chr 1
allele count: 1
allele frequency: 8.405197774303629e-6
allele num: 118974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.918C>G
  hgvsp: ENSP00000425796.1:p.Ser306Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1494C>G
  hgvsp: ENSP00000367651.3:p.Ser498Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1491C>G
  hgvsp: ENSP00000270722.5:p.Ser497Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1491C>G
  hgvsp: ENSP00000367643.2:p.Ser497Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1491C>G
  hgvsp: ENSP00000405253.2:p.Ser497Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1494C>G
  hgvsp: ENSP00000421400.1:p.Ser498Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1494C>G
  hgvsp: ENSP00000426975.1:p.Ser498Arg
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1269C>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1491C>G
  hgvsp: ENSP00000407968.2:p.Ser497Arg
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser497Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3328266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328266
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328266
    reference: chr 1
allele count: 1
allele frequency: 8.425451604205986e-6
allele num: 118688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1505C>T
  hgvsp: ENSP00000367643.2:p.Thr502Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1505C>T
  hgvsp: ENSP00000407968.2:p.Thr502Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.932C>T
  hgvsp: ENSP00000425796.1:p.Thr311Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1505C>T
  hgvsp: ENSP00000405253.2:p.Thr502Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1508C>T
  hgvsp: ENSP00000367651.3:p.Thr503Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1505C>T
  hgvsp: ENSP00000270722.5:p.Thr502Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1508C>T
  hgvsp: ENSP00000421400.1:p.Thr503Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1283C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1508C>T
  hgvsp: ENSP00000426975.1:p.Thr503Met
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5559
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr502Met
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

1-3328267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328267
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328267
    reference: chr 1
allele count: 4
allele frequency: 3.368194142710386e-5
allele num: 118758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1506G>A
  hgvsp: ENST00000442529.2:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1509G>A
  hgvsp: ENST00000514189.1:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1284G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1509G>A
  hgvsp: ENST00000511072.1:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1506G>A
  hgvsp: ENST00000378391.2:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1509G>A
  hgvsp: ENST00000378398.3:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.933G>A
  hgvsp: ENST00000509860.1:c.933G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1506G>A
  hgvsp: ENST00000441472.2:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1506G>A
  hgvsp: ENST00000270722.5:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr502Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-3328270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328270
    reference: chr 1
allele count: 5
allele frequency: 4.211519347719883e-5
allele num: 118722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1512G>A
  hgvsp: ENST00000378398.3:c.1512G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.936G>A
  hgvsp: ENST00000509860.1:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1509G>A
  hgvsp: ENST00000378391.2:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1512G>A
  hgvsp: ENST00000514189.1:c.1512G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1512G>A
  hgvsp: ENST00000511072.1:c.1512G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1287G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1509G>A
  hgvsp: ENST00000441472.2:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1509G>A
  hgvsp: ENST00000442529.2:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1509G>A
  hgvsp: ENST00000270722.5:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23381
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala503Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-3328274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328274
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328274
    reference: chr 1
allele count: 1
allele frequency: 8.424032078714155e-6
allele num: 118708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1513C>T
  hgvsp: ENSP00000405253.2:p.Pro505Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1516C>T
  hgvsp: ENSP00000426975.1:p.Pro506Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1513C>T
  hgvsp: ENSP00000270722.5:p.Pro505Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1516C>T
  hgvsp: ENSP00000367651.3:p.Pro506Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1516C>T
  hgvsp: ENSP00000421400.1:p.Pro506Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.940C>T
  hgvsp: ENSP00000425796.1:p.Pro314Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1513C>T
  hgvsp: ENSP00000367643.2:p.Pro505Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1291C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1513C>T
  hgvsp: ENSP00000407968.2:p.Pro505Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6216
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro505Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

1-3328278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328278
    reference: chr 1
allele count: 9
allele frequency: 7.58418444736576e-5
allele num: 118668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1520C>T
  hgvsp: ENSP00000367651.3:p.Thr507Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1517C>T
  hgvsp: ENSP00000405253.2:p.Thr506Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.944C>T
  hgvsp: ENSP00000425796.1:p.Thr315Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1520C>T
  hgvsp: ENSP00000426975.1:p.Thr507Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1520C>T
  hgvsp: ENSP00000421400.1:p.Thr507Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1517C>T
  hgvsp: ENSP00000407968.2:p.Thr506Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1517C>T
  hgvsp: ENSP00000270722.5:p.Thr506Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1517C>T
  hgvsp: ENSP00000367643.2:p.Thr506Met
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1295C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6220
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5575
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr506Met
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-3328279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328279
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328279
    reference: chr 1
allele count: 171
allele frequency: 1.441043618957729e-3
allele num: 118664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1518G>A
  hgvsp: ENST00000442529.2:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1521G>A
  hgvsp: ENST00000511072.1:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1521G>A
  hgvsp: ENST00000378398.3:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1518G>A
  hgvsp: ENST00000441472.2:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1518G>A
  hgvsp: ENST00000378391.2:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1296G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.945G>A
  hgvsp: ENST00000509860.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1521G>A
  hgvsp: ENST00000514189.1:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1518G>A
  hgvsp: ENST00000270722.5:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23350
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5566
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr506Thr
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-3328285-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328285
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328285
    reference: chr 1
allele count: 2
allele frequency: 1.685487948761166e-5
allele num: 118660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1524C>T
  hgvsp: ENST00000441472.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1527C>T
  hgvsp: ENST00000514189.1:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1302C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1524C>T
  hgvsp: ENST00000270722.5:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.951C>T
  hgvsp: ENST00000509860.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1524C>T
  hgvsp: ENST00000442529.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1524C>T
  hgvsp: ENST00000378391.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1527C>T
  hgvsp: ENST00000378398.3:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1527C>T
  hgvsp: ENST00000511072.1:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5573
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro508Pro
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-3328286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328286
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328286
    reference: chr 1
allele count: 12
allele frequency: 1.011667903149659e-4
allele num: 118616
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1525G>A
  hgvsp: ENSP00000407968.2:p.Ala509Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1303G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1528G>A
  hgvsp: ENSP00000426975.1:p.Ala510Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1528G>A
  hgvsp: ENSP00000421400.1:p.Ala510Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1525G>A
  hgvsp: ENSP00000367643.2:p.Ala509Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1525G>A
  hgvsp: ENSP00000405253.2:p.Ala509Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.952G>A
  hgvsp: ENSP00000425796.1:p.Ala318Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1525G>A
  hgvsp: ENSP00000270722.5:p.Ala509Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1528G>A
  hgvsp: ENSP00000367651.3:p.Ala510Thr
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala509Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/1-3328293-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328293
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328293
    reference: chr 1
allele count: 3
allele frequency: 2.531688298536684e-5
allele num: 118498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1310C>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1532C>A
  hgvsp: ENSP00000270722.5:p.Thr511Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1535C>A
  hgvsp: ENSP00000426975.1:p.Thr512Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1535C>A
  hgvsp: ENSP00000421400.1:p.Thr512Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1532C>A
  hgvsp: ENSP00000367643.2:p.Thr511Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.959C>A
  hgvsp: ENSP00000425796.1:p.Thr320Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1532C>A
  hgvsp: ENSP00000405253.2:p.Thr511Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1532C>A
  hgvsp: ENSP00000407968.2:p.Thr511Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1535C>A
  hgvsp: ENSP00000367651.3:p.Thr512Asn
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9426
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr511Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-3328297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328297
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328297
    reference: chr 1
allele count: 3
allele frequency: 2.529852256628213e-5
allele num: 118584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1539C>T
  hgvsp: ENST00000378398.3:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1536C>T
  hgvsp: ENST00000270722.5:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1536C>T
  hgvsp: ENST00000441472.2:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1536C>T
  hgvsp: ENST00000378391.2:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1539C>T
  hgvsp: ENST00000511072.1:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.963C>T
  hgvsp: ENST00000509860.1:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1539C>T
  hgvsp: ENST00000514189.1:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1536C>T
  hgvsp: ENST00000442529.2:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1314C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23581
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro512Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-3328298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328298
    reference: chr 1
allele count: 15
allele frequency: 1.264862130027827e-4
allele num: 118590
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1537G>A
  hgvsp: ENSP00000270722.5:p.Gly513Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1540G>A
  hgvsp: ENSP00000367651.3:p.Gly514Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1540G>A
  hgvsp: ENSP00000426975.1:p.Gly514Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1540G>A
  hgvsp: ENSP00000421400.1:p.Gly514Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1537G>A
  hgvsp: ENSP00000407968.2:p.Gly513Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1537G>A
  hgvsp: ENSP00000367643.2:p.Gly513Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1315G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.964G>A
  hgvsp: ENSP00000425796.1:p.Gly322Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1537G>A
  hgvsp: ENSP00000405253.2:p.Gly513Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9430
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 23657
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6369
  bin: 9.75e1
  variant carriers: 15
hgvs: p.Gly513Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

1-3328306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328306
    reference: chr 1
allele count: 13
allele frequency: 1.095327165798831e-4
allele num: 118686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1548G>A
  hgvsp: ENST00000378398.3:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1548G>A
  hgvsp: ENST00000511072.1:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1545G>A
  hgvsp: ENST00000378391.2:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1545G>A
  hgvsp: ENST00000270722.5:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1548G>A
  hgvsp: ENST00000514189.1:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1545G>A
  hgvsp: ENST00000442529.2:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1545G>A
  hgvsp: ENST00000441472.2:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.972G>A
  hgvsp: ENST00000509860.1:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1323G>A
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24111
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro515Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

1-3328308-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328308
    reference: chr 1
allele count: 1
allele frequency: 8.424315945545221e-6
allele num: 118704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1550G>T
  hgvsp: ENSP00000367651.3:p.Gly517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1547G>T
  hgvsp: ENSP00000367643.2:p.Gly516Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1550G>T
  hgvsp: ENSP00000426975.1:p.Gly517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1325G>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1550G>T
  hgvsp: ENSP00000421400.1:p.Gly517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1547G>T
  hgvsp: ENSP00000405253.2:p.Gly516Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1547G>T
  hgvsp: ENSP00000270722.5:p.Gly516Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.974G>T
  hgvsp: ENSP00000425796.1:p.Gly325Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1547G>T
  hgvsp: ENSP00000407968.2:p.Gly516Val
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly516Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-3328310-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328310
    reference: chr 1
allele count: 1
allele frequency: 8.420910805712745e-6
allele num: 118752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1552A>G
  hgvsp: ENSP00000421400.1:p.Ile518Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1549A>G
  hgvsp: ENSP00000367643.2:p.Ile517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.976A>G
  hgvsp: ENSP00000425796.1:p.Ile326Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1552A>G
  hgvsp: ENSP00000426975.1:p.Ile518Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1549A>G
  hgvsp: ENSP00000405253.2:p.Ile517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1327A>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1549A>G
  hgvsp: ENSP00000407968.2:p.Ile517Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1552A>G
  hgvsp: ENSP00000367651.3:p.Ile518Val
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1549A>G
  hgvsp: ENSP00000270722.5:p.Ile517Val
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23232
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile517Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-3328310-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328310
    reference: chr 1
allele count: 1
allele frequency: 8.420910805712745e-6
allele num: 118752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1552A>T
  hgvsp: ENSP00000421400.1:p.Ile518Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1549A>T
  hgvsp: ENSP00000405253.2:p.Ile517Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1549A>T
  hgvsp: ENSP00000407968.2:p.Ile517Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1549A>T
  hgvsp: ENSP00000270722.5:p.Ile517Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1549A>T
  hgvsp: ENSP00000367643.2:p.Ile517Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1327A>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.976A>T
  hgvsp: ENSP00000425796.1:p.Ile326Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1552A>T
  hgvsp: ENSP00000426975.1:p.Ile518Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1552A>T
  hgvsp: ENSP00000367651.3:p.Ile518Phe
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6382
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile517Phe
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-3328314-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328314
    reference: chr 1
allele count: 1
allele frequency: 8.417933565668301e-6
allele num: 118794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1556T>C
  hgvsp: ENSP00000426975.1:p.Phe519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1553T>C
  hgvsp: ENSP00000270722.5:p.Phe518Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1553T>C
  hgvsp: ENSP00000405253.2:p.Phe518Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1331T>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1553T>C
  hgvsp: ENSP00000407968.2:p.Phe518Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1556T>C
  hgvsp: ENSP00000367651.3:p.Phe519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1556T>C
  hgvsp: ENSP00000421400.1:p.Phe519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.980T>C
  hgvsp: ENSP00000425796.1:p.Phe327Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1553T>C
  hgvsp: ENSP00000367643.2:p.Phe518Ser
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe518Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-3328316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328316
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328316
    reference: chr 1
allele count: 9
allele frequency: 7.574737409103151e-5
allele num: 118816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1555C>T
  hgvsp: ENSP00000405253.2:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1555C>T
  hgvsp: ENSP00000270722.5:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1558C>T
  hgvsp: ENSP00000421400.1:p.Pro520Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1555C>T
  hgvsp: ENSP00000407968.2:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1558C>T
  hgvsp: ENSP00000426975.1:p.Pro520Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1558C>T
  hgvsp: ENSP00000367651.3:p.Pro520Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1555C>T
  hgvsp: ENSP00000367643.2:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.982C>T
  hgvsp: ENSP00000425796.1:p.Pro328Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1333C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro519Ser
num of homozygotes: 2
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-3328323-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328323
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328323
    reference: chr 1
allele count: 1
allele frequency: 8.410994852471151e-6
allele num: 118892
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.989C>G
  hgvsp: ENSP00000425796.1:p.Ser330Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1565C>G
  hgvsp: ENSP00000421400.1:p.Ser522Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1340C>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1562C>G
  hgvsp: ENSP00000405253.2:p.Ser521Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1565C>G
  hgvsp: ENSP00000367651.3:p.Ser522Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1562C>G
  hgvsp: ENSP00000367643.2:p.Ser521Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1565C>G
  hgvsp: ENSP00000426975.1:p.Ser522Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1562C>G
  hgvsp: ENSP00000407968.2:p.Ser521Cys
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1562C>G
  hgvsp: ENSP00000270722.5:p.Ser521Cys
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16284
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4279
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6388
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser521Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-3328327-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328327
    reference: chr 1
allele count: 167
allele frequency: 1.404352652292374e-3
allele num: 118916
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1566G>T
  hgvsp: ENSP00000270722.5:p.Leu522Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1569G>T
  hgvsp: ENSP00000426975.1:p.Leu523Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1566G>T
  hgvsp: ENSP00000405253.2:p.Leu522Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.993G>T
  hgvsp: ENSP00000425796.1:p.Leu331Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1566G>T
  hgvsp: ENSP00000367643.2:p.Leu522Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1569G>T
  hgvsp: ENSP00000421400.1:p.Leu523Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1566G>T
  hgvsp: ENSP00000407968.2:p.Leu522Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1569G>T
  hgvsp: ENSP00000367651.3:p.Leu523Phe
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1344G>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 9.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu522Phe
num of homozygotes: 1
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-3328334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328334
    reference: chr 1
allele count: 3
allele frequency: 2.51994960100798e-5
allele num: 119050
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1573C>T
  hgvsp: ENSP00000270722.5:p.Arg525Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1576C>T
  hgvsp: ENSP00000421400.1:p.Arg526Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1573C>T
  hgvsp: ENSP00000367643.2:p.Arg525Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1573C>T
  hgvsp: ENSP00000407968.2:p.Arg525Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1576C>T
  hgvsp: ENSP00000426975.1:p.Arg526Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1576C>T
  hgvsp: ENSP00000367651.3:p.Arg526Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1351C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1000C>T
  hgvsp: ENSP00000425796.1:p.Arg334Trp
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1573C>T
  hgvsp: ENSP00000405253.2:p.Arg525Trp
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8834
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg525Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

1-3328335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328335
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328335
    reference: chr 1
allele count: 16
allele frequency: 1.343792518435154e-4
allele num: 119066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1352G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1574G>A
  hgvsp: ENSP00000407968.2:p.Arg525Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1574G>A
  hgvsp: ENSP00000367643.2:p.Arg525Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1577G>A
  hgvsp: ENSP00000421400.1:p.Arg526Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1574G>A
  hgvsp: ENSP00000270722.5:p.Arg525Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1574G>A
  hgvsp: ENSP00000405253.2:p.Arg525Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1577G>A
  hgvsp: ENSP00000367651.3:p.Arg526Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1577G>A
  hgvsp: ENSP00000426975.1:p.Arg526Gln
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1001G>A
  hgvsp: ENSP00000425796.1:p.Arg334Gln
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5767
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg525Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-3328339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328339
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328339
    reference: chr 1
allele count: 16
allele frequency: 1.3430029546065e-4
allele num: 119136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1356G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1578G>A
  hgvsp: ENST00000441472.2:c.1578G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1578G>A
  hgvsp: ENST00000378391.2:c.1578G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1581G>A
  hgvsp: ENST00000514189.1:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1005G>A
  hgvsp: ENST00000509860.1:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1581G>A
  hgvsp: ENST00000378398.3:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1578G>A
  hgvsp: ENST00000442529.2:c.1578G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1581G>A
  hgvsp: ENST00000511072.1:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1578G>A
  hgvsp: ENST00000270722.5:c.1578G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24668
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro526Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-3328358-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328358
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328358
    reference: chr 1
allele count: 106618
allele frequency: 8.896844072831656e-1
allele num: 119838
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1600T>C
  hgvsp: ENSP00000421400.1:p.Ser534Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1597T>C
  hgvsp: ENSP00000407968.2:p.Ser533Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1375T>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1024T>C
  hgvsp: ENSP00000425796.1:p.Ser342Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1597T>C
  hgvsp: ENSP00000367643.2:p.Ser533Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1597T>C
  hgvsp: ENSP00000405253.2:p.Ser533Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1600T>C
  hgvsp: ENSP00000426975.1:p.Ser534Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1597T>C
  hgvsp: ENSP00000270722.5:p.Ser533Pro
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1600T>C
  hgvsp: ENSP00000367651.3:p.Ser534Pro
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.25e1
  variant carriers: 481
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.75e1
  variant carriers: 1352
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 698
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 9.25e1
  variant carriers: 546
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.75e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.25e1
  variant carriers: 1108
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.75e1
  variant carriers: 1260
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 545
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 990
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 1306
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 46697
  bin: 9.75e1
  variant carriers: 46696
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.75e1
  variant carriers: 503
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 704
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 445
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 170
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 6.25e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 54
hgvs: p.Ser533Pro
num of homozygotes: 47669
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-3328358-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328358
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328358
    reference: chr 1
allele count: 1
allele frequency: 8.344598541364175e-6
allele num: 119838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1597T>G
  hgvsp: ENSP00000405253.2:p.Ser533Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1600T>G
  hgvsp: ENSP00000426975.1:p.Ser534Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1597T>G
  hgvsp: ENSP00000270722.5:p.Ser533Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1024T>G
  hgvsp: ENSP00000425796.1:p.Ser342Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1375T>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1600T>G
  hgvsp: ENSP00000421400.1:p.Ser534Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1600T>G
  hgvsp: ENSP00000367651.3:p.Ser534Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1597T>G
  hgvsp: ENSP00000367643.2:p.Ser533Ala
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1597T>G
  hgvsp: ENSP00000407968.2:p.Ser533Ala
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46697
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser533Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-3328359-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328359
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328359
    reference: chr 1
allele count: 1
allele frequency: 8.367360599772408e-6
allele num: 119512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1598C>T
  hgvsp: ENSP00000367643.2:p.Ser533Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1601C>T
  hgvsp: ENSP00000367651.3:p.Ser534Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1601C>T
  hgvsp: ENSP00000426975.1:p.Ser534Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1376C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1601C>T
  hgvsp: ENSP00000421400.1:p.Ser534Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1598C>T
  hgvsp: ENSP00000407968.2:p.Ser533Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1598C>T
  hgvsp: ENSP00000405253.2:p.Ser533Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1598C>T
  hgvsp: ENSP00000270722.5:p.Ser533Leu
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1025C>T
  hgvsp: ENSP00000425796.1:p.Ser342Leu
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser533Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

1-3328360-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328360
    reference: chr 1
allele count: 20
allele frequency: 1.673584147810952e-4
allele num: 119504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1602G>A
  hgvsp: ENST00000378398.3:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1599G>A
  hgvsp: ENST00000378391.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1602G>A
  hgvsp: ENST00000511072.1:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1602G>A
  hgvsp: ENST00000514189.1:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1599G>A
  hgvsp: ENST00000442529.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1026G>A
  hgvsp: ENST00000509860.1:c.1026G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1599G>A
  hgvsp: ENST00000441472.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1599G>A
  hgvsp: ENST00000270722.5:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1377G>A
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12109
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser533Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-3328369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328369
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328369
    reference: chr 1
allele count: 1
allele frequency: 8.373526259378349e-6
allele num: 119424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1386G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1035G>A
  hgvsp: ENST00000509860.1:c.1035G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1611G>A
  hgvsp: ENST00000378398.3:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1608G>A
  hgvsp: ENST00000378391.2:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1611G>A
  hgvsp: ENST00000511072.1:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1611G>A
  hgvsp: ENST00000514189.1:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1608G>A
  hgvsp: ENST00000442529.2:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1608G>A
  hgvsp: ENST00000270722.5:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1608G>A
  hgvsp: ENST00000441472.2:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys536Lys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-3328375-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328375
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328375
    reference: chr 1
allele count: 6
allele frequency: 5.025799102057227e-5
allele num: 119384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1392C>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1614C>A
  hgvsp: ENST00000442529.2:c.1614C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1614C>A
  hgvsp: ENST00000378391.2:c.1614C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1614C>A
  hgvsp: ENST00000270722.5:c.1614C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1041C>A
  hgvsp: ENST00000509860.1:c.1041C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1617C>A
  hgvsp: ENST00000511072.1:c.1617C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1617C>A
  hgvsp: ENST00000514189.1:c.1617C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1614C>A
  hgvsp: ENST00000441472.2:c.1614C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1617C>A
  hgvsp: ENST00000378398.3:c.1617C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34084
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro538Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-3328386-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328386
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328386
    reference: chr 1
allele count: 63
allele frequency: 5.284436913888843e-4
allele num: 119218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1628C>A
  hgvsp: ENSP00000367651.3:p.Thr543Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1625C>A
  hgvsp: ENSP00000270722.5:p.Thr542Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1052C>A
  hgvsp: ENSP00000425796.1:p.Thr351Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1625C>A
  hgvsp: ENSP00000405253.2:p.Thr542Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1625C>A
  hgvsp: ENSP00000407968.2:p.Thr542Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1628C>A
  hgvsp: ENSP00000426975.1:p.Thr543Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1628C>A
  hgvsp: ENSP00000421400.1:p.Thr543Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1625C>A
  hgvsp: ENSP00000367643.2:p.Thr542Asn
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1403C>A
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11920
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20625
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33673
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr542Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-3328387-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328387
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328387
    reference: chr 1
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1626C>G
  hgvsp: ENST00000442529.2:c.1626C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1626C>G
  hgvsp: ENST00000270722.5:c.1626C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1629C>G
  hgvsp: ENST00000514189.1:c.1629C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1626C>G
  hgvsp: ENST00000378391.2:c.1626C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1629C>G
  hgvsp: ENST00000378398.3:c.1629C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1626C>G
  hgvsp: ENST00000441472.2:c.1626C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1053C>G
  hgvsp: ENST00000509860.1:c.1053C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1629C>G
  hgvsp: ENST00000511072.1:c.1629C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1404C>G
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr542Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

1-3328387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328387
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328387
    reference: chr 1
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1626C>T
  hgvsp: ENST00000442529.2:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1629C>T
  hgvsp: ENST00000514189.1:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1629C>T
  hgvsp: ENST00000378398.3:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1626C>T
  hgvsp: ENST00000378391.2:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1053C>T
  hgvsp: ENST00000509860.1:c.1053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1626C>T
  hgvsp: ENST00000441472.2:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1629C>T
  hgvsp: ENST00000511072.1:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1626C>T
  hgvsp: ENST00000270722.5:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1404C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr542Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD

1-3328392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328392
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328392
    reference: chr 1
allele count: 1
allele frequency: 8.391092016715055e-6
allele num: 119174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1634A>G
  hgvsp: ENSP00000426975.1:p.Asp545Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1409A>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1634A>G
  hgvsp: ENSP00000421400.1:p.Asp545Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1631A>G
  hgvsp: ENSP00000367643.2:p.Asp544Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1634A>G
  hgvsp: ENSP00000367651.3:p.Asp545Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1058A>G
  hgvsp: ENSP00000425796.1:p.Asp353Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1631A>G
  hgvsp: ENSP00000407968.2:p.Asp544Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1631A>G
  hgvsp: ENSP00000405253.2:p.Asp544Gly
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1631A>G
  hgvsp: ENSP00000270722.5:p.Asp544Gly
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp544Gly
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

1-3328393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328393
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328393
    reference: chr 1
allele count: 27
allele frequency: 2.267078659232888e-4
allele num: 119096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1635C>T
  hgvsp: ENST00000514189.1:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1632C>T
  hgvsp: ENST00000441472.2:c.1632C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1410C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1635C>T
  hgvsp: ENST00000378398.3:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1632C>T
  hgvsp: ENST00000378391.2:c.1632C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1632C>T
  hgvsp: ENST00000442529.2:c.1632C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1632C>T
  hgvsp: ENST00000270722.5:c.1632C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1635C>T
  hgvsp: ENST00000511072.1:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1059C>T
  hgvsp: ENST00000509860.1:c.1059C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7615
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp544Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

1-3328394-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328394
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328394
    reference: chr 1
allele count: 2
allele frequency: 1.679176531828791e-5
allele num: 119106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1633G>A
  hgvsp: ENSP00000367643.2:p.Ala545Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1636G>A
  hgvsp: ENSP00000421400.1:p.Ala546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1636G>A
  hgvsp: ENSP00000367651.3:p.Ala546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1060G>A
  hgvsp: ENSP00000425796.1:p.Ala354Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1411G>A
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1636G>A
  hgvsp: ENSP00000426975.1:p.Ala546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1633G>A
  hgvsp: ENSP00000270722.5:p.Ala545Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1633G>A
  hgvsp: ENSP00000407968.2:p.Ala545Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1633G>A
  hgvsp: ENSP00000405253.2:p.Ala545Thr
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala545Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/1-3328398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328398
    reference: chr 1
allele count: 1
allele frequency: 8.395318770253707e-6
allele num: 119114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1637A>C
  hgvsp: ENSP00000367643.2:p.Lys546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1637A>C
  hgvsp: ENSP00000407968.2:p.Lys546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1640A>C
  hgvsp: ENSP00000367651.3:p.Lys547Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1637A>C
  hgvsp: ENSP00000270722.5:p.Lys546Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1064A>C
  hgvsp: ENSP00000425796.1:p.Lys355Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1640A>C
  hgvsp: ENSP00000421400.1:p.Lys547Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1415A>C
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1640A>C
  hgvsp: ENSP00000426975.1:p.Lys547Thr
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1637A>C
  hgvsp: ENSP00000405253.2:p.Lys546Thr
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys546Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-3328409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328409
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328409
    reference: chr 1
allele count: 1
allele frequency: 8.410853365182432e-6
allele num: 118894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1648C>T
  hgvsp: ENSP00000405253.2:p.Pro550Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1648C>T
  hgvsp: ENSP00000407968.2:p.Pro550Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1651C>T
  hgvsp: ENSP00000426975.1:p.Pro551Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1651C>T
  hgvsp: ENSP00000421400.1:p.Pro551Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1075C>T
  hgvsp: ENSP00000425796.1:p.Pro359Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1648C>T
  hgvsp: ENSP00000270722.5:p.Pro550Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1651C>T
  hgvsp: ENSP00000367651.3:p.Pro551Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1648C>T
  hgvsp: ENSP00000367643.2:p.Pro550Ser
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1426C>T
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro550Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

1-3328412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328412
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328412
    reference: chr 1
allele count: 1
allele frequency: 8.415100055539661e-6
allele num: 118834
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1651C>T
  hgvsp: ENST00000270722.5:c.1651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1651C>T
  hgvsp: ENST00000378391.2:c.1651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1651C>T
  hgvsp: ENST00000442529.2:c.1651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1078C>T
  hgvsp: ENST00000509860.1:c.1078C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1429C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1654C>T
  hgvsp: ENST00000514189.1:c.1654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1651C>T
  hgvsp: ENST00000441472.2:c.1651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1654C>T
  hgvsp: ENST00000511072.1:c.1654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1654C>T
  hgvsp: ENST00000378398.3:c.1654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu551Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-3328426-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328426
    reference: chr 1
allele count: 3
allele frequency: 2.53074859543453e-5
allele num: 118542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1665C>A
  hgvsp: ENST00000442529.2:c.1665C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1668C>A
  hgvsp: ENST00000511072.1:c.1668C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1668C>A
  hgvsp: ENST00000378398.3:c.1668C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1665C>A
  hgvsp: ENST00000378391.2:c.1665C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1668C>A
  hgvsp: ENST00000514189.1:c.1668C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1092C>A
  hgvsp: ENST00000509860.1:c.1092C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1665C>A
  hgvsp: ENST00000270722.5:c.1665C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1665C>A
  hgvsp: ENST00000441472.2:c.1665C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1443C>A
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19714
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32874
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala555Ala
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

1-3328429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328429
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328429
    reference: chr 1
allele count: 8
allele frequency: 6.748662921158745e-5
allele num: 118542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1671G>A
  hgvsp: ENST00000511072.1:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1668G>A
  hgvsp: ENST00000378391.2:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1668G>A
  hgvsp: ENST00000441472.2:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1668G>A
  hgvsp: ENST00000270722.5:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1668G>A
  hgvsp: ENST00000442529.2:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1095G>A
  hgvsp: ENST00000509860.1:c.1095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1671G>A
  hgvsp: ENST00000378398.3:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1671G>A
  hgvsp: ENST00000514189.1:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1446G>A
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu556Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff

1-3328432-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328432
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328432
    reference: chr 1
allele count: 1
allele frequency: 8.439245868989148e-6
allele num: 118494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1671C>G
  hgvsp: ENST00000441472.2:c.1671C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1674C>G
  hgvsp: ENST00000378398.3:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1449C>G
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1671C>G
  hgvsp: ENST00000270722.5:c.1671C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1671C>G
  hgvsp: ENST00000442529.2:c.1671C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1671C>G
  hgvsp: ENST00000378391.2:c.1671C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1098C>G
  hgvsp: ENST00000509860.1:c.1098C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1674C>G
  hgvsp: ENST00000514189.1:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1674C>G
  hgvsp: ENST00000511072.1:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro557Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-3328432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3328432
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3328432
    reference: chr 1
allele count: 1
allele frequency: 8.439245868989148e-6
allele num: 118494
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000270722
  ensembl transcript: ENST00000270722
  gene symbol: PRDM16
  hgvsc: ENST00000270722.5:c.1671C>T
  hgvsp: ENST00000270722.5:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000425796
  ensembl transcript: ENST00000509860
  gene symbol: PRDM16
  hgvsc: ENST00000509860.1:c.1098C>T
  hgvsp: ENST00000509860.1:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142611
  ensembl transcript: ENST00000512462
  gene symbol: PRDM16
  hgvsc: ENST00000512462.1:n.1449C>T
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000405253
  ensembl transcript: ENST00000442529
  gene symbol: PRDM16
  hgvsc: ENST00000442529.2:c.1671C>T
  hgvsp: ENST00000442529.2:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000421400
  ensembl transcript: ENST00000514189
  gene symbol: PRDM16
  hgvsc: ENST00000514189.1:c.1674C>T
  hgvsp: ENST00000514189.1:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000426975
  ensembl transcript: ENST00000511072
  gene symbol: PRDM16
  hgvsc: ENST00000511072.1:c.1674C>T
  hgvsp: ENST00000511072.1:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367651
  ensembl transcript: ENST00000378398
  gene symbol: PRDM16
  hgvsc: ENST00000378398.3:c.1674C>T
  hgvsp: ENST00000378398.3:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000367643
  ensembl transcript: ENST00000378391
  gene symbol: PRDM16
  hgvsc: ENST00000378391.2:c.1671C>T
  hgvsp: ENST00000378391.2:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142611
  ensembl protein: ENSP00000407968
  ensembl transcript: ENST00000441472
  gene symbol: PRDM16
  hgvsc: ENST00000441472.2:c.1671C>T
  hgvsp: ENST00000441472.2:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro557Pro
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8833
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6095
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4136
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213297743266198e-4
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.596e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.681e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

DP
type: SiteQuality
SIO_000300: 1.641223e6

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

QD
type: SiteQuality
SIO_000300: 1.151e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 2009
bin: 8.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.661e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.146e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.84e0

DP
type: SiteQuality
SIO_000300: 1.641328e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01295570955107e-5
allele num: 66380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.641299e6

FS
type: SiteQuality
SIO_000300: 8.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.117e0

QD
type: SiteQuality
SIO_000300: 1.351e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.027364233620638e-5
allele num: 66364
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.029866117404737e-4
allele num: 9710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.966e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.29e1

FS
type: SiteQuality
SIO_000300: 5.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 1.641416e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012774162448783e-5
allele num: 66384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.736e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 5.18e0

DP
type: SiteQuality
SIO_000300: 1.641575e6

QD
type: SiteQuality
SIO_000300: 1.288e1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.767e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e0

DP
type: SiteQuality
SIO_000300: 1.640687e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

FS
type: SiteQuality
SIO_000300: 4.196e0

QD
type: SiteQuality
SIO_000300: 1.043e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.877e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729804532087874e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.24e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.6392e6

VQSLOD
type: SiteQuality
SIO_000300: 4.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 2.585e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.53e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66248
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 2.49845e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQ
type: SiteQuality
SIO_000300: 5.177e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 51

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 109
bin: 4.25e1
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GenotypeQuality
all individuals: 228
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 49
allele frequency: 5.051546391752577e-3
allele num: 9700
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.64491e6

QD
type: SiteQuality
SIO_000300: 1.237e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.316e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8744
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128953174797744e-5
allele num: 16316
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.193e1

DP
type: SiteQuality
SIO_000300: 1.643445e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5527
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

BaseQRankSum
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SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.193e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 1.643445e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508386629660915e-5
allele num: 66296
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322880371660859e-4
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 1.736e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

DP
type: SiteQuality
SIO_000300: 1.642627e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508978421608571e-5
allele num: 66270
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 1.217e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.73e-1

FS
type: SiteQuality
SIO_000300: 2.6e0

MQ
type: SiteQuality
SIO_000300: 5.847e1

DP
type: SiteQuality
SIO_000300: 1.642226e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.147792942333702e-5
allele num: 16266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.217e1

DP
type: SiteQuality
SIO_000300: 1.642226e6

FS
type: SiteQuality
SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

VQSLOD
type: SiteQuality
SIO_000300: -7.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

MQ
type: SiteQuality
SIO_000300: 5.847e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50879628232596e-5
allele num: 66278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.642192e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.012e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

FS
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 5.76e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.013e0

DP
type: SiteQuality
SIO_000300: 1.639933e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
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allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.639819e6

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 2.78e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8606
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.195786864931847e-5
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QD
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 1.030290541932825e-4
allele num: 9706
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.218132073125233e-5
allele num: 16082
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.029018316526034e-4
allele num: 9718
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596053997923157e-4
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.34e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.061e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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MQ
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66120
num of homozygotes: 0

African
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Latino
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South Asian
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East Asian
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Other
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European (Finnish)
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QD
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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allele num: 66100
num of homozygotes: 0

Latino
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European (Finnish)
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Other
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East Asian
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66114
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027749229188078e-4
allele num: 9730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15662
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.118e1

DP
type: SiteQuality
SIO_000300: 1.623052e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.311e0

VQSLOD
type: SiteQuality
SIO_000300: -9.78e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.824e0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513637877274241e-5
allele num: 66066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.288e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.622791e6

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8580
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.084515731030228e-4
allele num: 9726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.435834727764191e-5
allele num: 15538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027275754548482e-5
allele num: 66066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.623246e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

QD
type: SiteQuality
SIO_000300: 1.454e1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 200
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.69e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

FS
type: SiteQuality
SIO_000300: 1.952e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.092e1

MQRankSum
type: SiteQuality
SIO_000300: -7.98e-1

DP
type: SiteQuality
SIO_000300: 1.622495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

GenotypeQuality
all individuals: 733
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4222
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.853e1

DP
type: SiteQuality
SIO_000300: 1.620014e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 9.856e0

QD
type: SiteQuality
SIO_000300: 1.089e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -1.706e0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.05913717886573e-5
allele num: 66016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.62026e6

QD
type: SiteQuality
SIO_000300: 1.39e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8561
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.056766762649116e-4
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515197430225158e-5
allele num: 65998
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.496037417175523e-5
allele num: 15394
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.443e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

DP
type: SiteQuality
SIO_000300: 1.620494e6

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.279e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15424
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 5.659999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4226
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GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.364297841377638e-4
allele num: 65968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.621388e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 1.745e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.263e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1820
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6362
bin: 9.75e1
variant carriers: 169

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 13
allele frequency: 1.126907073509015e-3
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.031864900100051e-5
allele num: 65966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 155
allele frequency: 1.594322155934993e-2
allele num: 9722
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.499415052645263e-5
allele num: 15386
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.641252e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

GenotypeQuality
all individuals: 469
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6342
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.485925541574782e-5
allele num: 15418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168224299065421e-4
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.75e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 1.639044e6

FS
type: SiteQuality
SIO_000300: 8.234e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-2

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6352
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 5581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22441
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.819615454600594e-4
allele num: 65948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.319e1

DP
type: SiteQuality
SIO_000300: 1.641302e6

GenotypeQuality
all individuals: 472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4228
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6355
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65874
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.944768572539868e-4
allele num: 15426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.064e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

DP
type: SiteQuality
SIO_000300: 1.642128e6

FS
type: SiteQuality
SIO_000300: 2.579e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.872e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
all individuals: 617
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6359
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.035269835488375e-5
allele num: 65892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15490
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.514e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

DP
type: SiteQuality
SIO_000300: 1.644554e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

GenotypeQuality
all individuals: 616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.75e1
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GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.0351966873706e-4
allele num: 9660
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.8216595318335e-4
allele num: 65874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.647147e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.35e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 4.063e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.274e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
all individuals: 6380
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
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GenotypeQuality
all individuals: 242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.75e1
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GenotypeQuality
all individuals: 23153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8693
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variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.365581282432555e-4
allele num: 65906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.561147394032526e-4
allele num: 15618
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.65387e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.75e1
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GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
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GenotypeQuality
all individuals: 5663
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23192
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6377
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2027
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.036484245439469e-4
allele num: 9648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 4.34e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
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SIO_000300: 1.654311e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

VQSLOD
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SIO_000300: 1.02e0

BaseQRankSum
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SIO_000300: -1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.036699149906697e-4
allele num: 9646
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65924
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

QD
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.516898246465627e-5
allele num: 65924
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 1.655391e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51666818333485e-5
allele num: 65934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.389999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.656872e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

FS
type: SiteQuality
SIO_000300: 2.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
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allele frequency: 5.725919328158799e-4
allele num: 15718
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65946
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.043e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.658839e6

FS
type: SiteQuality
SIO_000300: 5.982e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.86e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.627e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65944
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.318716036901302e-5
allele num: 15826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.442224152910513e-2
allele num: 11510
num of homozygotes: 1

European (Non-Finnish)
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allele frequency: 1.516484183069971e-5
allele num: 65942
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.522e0

DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Latino
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African
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East Asian
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European (Finnish)
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FS
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
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QD
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
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allele frequency: 2.079434393844874e-4
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East Asian
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allele frequency: 7.06547338671691e-4
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European (Non-Finnish)
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allele frequency: 1.212268153715602e-4
allele num: 65992
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Latino
type: Population
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Other
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South Asian
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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FS
type: SiteQuality
SIO_000300: 1.101e0

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8881
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GenotypeQuality
all individuals: 50
bin: 1.75e1
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GenotypeQuality
all individuals: 6688
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 4291
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variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.536067892503536e-4
allele num: 8484
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.039284971939306e-4
allele num: 9622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.514921981517952e-4
allele num: 66010
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.236746912810279e-5
allele num: 16034
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 1.101e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.707519e6

QD
type: SiteQuality
SIO_000300: 1.323e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.105e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 283
bin: 5.25e1
variant carriers: 282

GenotypeQuality
all individuals: 55278
bin: 9.75e1
variant carriers: 55274

GenotypeQuality
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bin: 8.25e1
variant carriers: 457

GenotypeQuality
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bin: 1.75e1
variant carriers: 99

GenotypeQuality
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bin: 6.75e1
variant carriers: 448

GenotypeQuality
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GenotypeQuality
all individuals: 478
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variant carriers: 462

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 42

GenotypeQuality
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variant carriers: 216

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 468

GenotypeQuality
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variant carriers: 284

GenotypeQuality
all individuals: 104
bin: 4.25e1
variant carriers: 103

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 190

South Asian
type: Population
allele count: 15606
allele frequency: 9.507737297429024e-1
allele num: 16414
num of homozygotes: 7422

Other
type: Population
allele count: 795
allele frequency: 8.872767857142857e-1
allele num: 896
num of homozygotes: 349

European (Finnish)
type: Population
allele count: 6000
allele frequency: 9.099181073703366e-1
allele num: 6594
num of homozygotes: 2733

European (Non-Finnish)
type: Population
allele count: 55694
allele frequency: 8.404358061206012e-1
allele num: 66268
num of homozygotes: 23426

Latino
type: Population
allele count: 10644
allele frequency: 9.24279263633206e-1
allele num: 11516
num of homozygotes: 4931

African
type: Population
allele count: 9377
allele frequency: 9.721127928675098e-1
allele num: 9646
num of homozygotes: 4558

East Asian
type: Population
allele count: 8502
allele frequency: 9.997648165569144e-1
allele num: 8504
num of homozygotes: 4250

VQSLOD
type: SiteQuality
SIO_000300: 4.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.12e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 3.002e1

DP
type: SiteQuality
SIO_000300: 9.63147e6

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1134
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 116
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GenotypeQuality
all individuals: 470
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 285
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GenotypeQuality
all individuals: 459
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variant carriers: 0

GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.036699149906697e-4
allele num: 9646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66268
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.29e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 3.002e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.12e-2

DP
type: SiteQuality
SIO_000300: 9.63147e6

GenotypeQuality
all individuals: 595
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 256
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GenotypeQuality
all individuals: 99
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1745
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variant carriers: 0

GenotypeQuality
all individuals: 740
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variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038637307852098e-4
allele num: 9628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 2.508e0

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

QD
type: SiteQuality
SIO_000300: 3.297e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: -9.56e-1

DP
type: SiteQuality
SIO_000300: 2.3413e6

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 171
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variant carriers: 0

GenotypeQuality
all individuals: 230
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GenotypeQuality
all individuals: 1508
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variant carriers: 0

GenotypeQuality
all individuals: 372
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GenotypeQuality
all individuals: 34109
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GenotypeQuality
all individuals: 307
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GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 1736
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variant carriers: 0

GenotypeQuality
all individuals: 11655
bin: 9.75e1
variant carriers: 20

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.76678445229682e-3
allele num: 9622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512355948095944e-5
allele num: 66122
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137981831573779e-5
allele num: 16292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.265e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

DP
type: SiteQuality
SIO_000300: 2.340707e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 1.113e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

GenotypeQuality
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 11630
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GenotypeQuality
all individuals: 290
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 734
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GenotypeQuality
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GenotypeQuality
all individuals: 240
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GenotypeQuality
all individuals: 131
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GenotypeQuality
all individuals: 79
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GenotypeQuality
all individuals: 366
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GenotypeQuality
all individuals: 92
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GenotypeQuality
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GenotypeQuality
all individuals: 34025
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GenotypeQuality
all individuals: 710
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.89e0

VQSLOD
type: SiteQuality
SIO_000300: -9.535e-1

QD
type: SiteQuality
SIO_000300: 2.809e1

FS
type: SiteQuality
SIO_000300: 2.516e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.335411e6

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 93
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GenotypeQuality
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GenotypeQuality
all individuals: 45
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 114
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.567731194187983e-5
allele num: 66070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.18e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.647e0

FS
type: SiteQuality
SIO_000300: 5.331e0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 2.332774e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

GenotypeQuality
all individuals: 417
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
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GenotypeQuality
all individuals: 978
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GenotypeQuality
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GenotypeQuality
all individuals: 259
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GenotypeQuality
all individuals: 60
bin: 1.25e1
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GenotypeQuality
all individuals: 287
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GenotypeQuality
all individuals: 174
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GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 133
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GenotypeQuality
all individuals: 352
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GenotypeQuality
all individuals: 11633
bin: 9.75e1
variant carriers: 60

GenotypeQuality
all individuals: 7669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1398
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 62
allele frequency: 3.830944142362827e-3
allele num: 16184
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.806e0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

DP
type: SiteQuality
SIO_000300: 2.3247e6

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.181753722524226e-4
allele num: 8462
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65972
num of homozygotes: 0

MQ
type: SiteQuality
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QD
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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ClippingRankSum
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SIO_000300: -3.7e-1

MQRankSum
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SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

VQSLOD
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SIO_000300: 5.07e0

BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515794579518584e-5
allele num: 65972
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.392e0

ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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MQ
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QD
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16198
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.318569e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 8
allele frequency: 9.456264775413711e-4
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.57864878803507e-4
allele num: 65926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
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Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044059302568386e-4
allele num: 9578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.75e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.31779e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.516944267467613e-5
allele num: 65922
num of homozygotes: 0

South Asian
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allele num: 16174
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9574
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.682e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

FS
type: SiteQuality
SIO_000300: 1.834e0

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65908
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Other
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South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
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MQ
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8462
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65794
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.520958812435359e-5
allele num: 65748
num of homozygotes: 0

African
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South Asian
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East Asian
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Other
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7144
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.577497024626934e-5
allele num: 65538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.282931e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.455e0

FS
type: SiteQuality
SIO_000300: 5.152e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.321e1

VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32908
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11477
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 7141
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.633121641426478e-5
allele num: 65504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.202704379109291e-5
allele num: 16122
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.453e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.281727e6

QD
type: SiteQuality
SIO_000300: 1.249e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
all individuals: 1718
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11468
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7078
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527510463446675e-5
allele num: 65466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9464
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.496e1

MQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

FS
type: SiteQuality
SIO_000300: 2.247e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

DP
type: SiteQuality
SIO_000300: 2.279959e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e0