1-151377449-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377449
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377449
    reference: chr 1
allele count: 6
allele frequency: 4.942420797706717e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4062G>C
  hgvsp: ENSP00000271715.2:p.Glu1354Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4210G>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.4035G>C
  hgvsp: ENSP00000386836.1:p.Glu1345Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3876G>C
  hgvsp: ENSP00000431259.1:p.Glu1292Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3903G>C
  hgvsp: ENSP00000354467.3:p.Glu1301Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3930G>C
  hgvsp: ENSP00000418408.1:p.Glu1310Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3903G>C
  hgvsp: ENSP00000376484.1:p.Glu1301Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2148G>C
  hgvsp: ENSP00000443547.1:p.Glu716Asp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3777G>C
  hgvsp: ENSP00000357856.2:p.Glu1259Asp
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu1354Asp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-151377468-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377468
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377468
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3758A>G
  hgvsp: ENSP00000357856.2:p.Glu1253Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2129A>G
  hgvsp: ENSP00000443547.1:p.Glu710Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3911A>G
  hgvsp: ENSP00000418408.1:p.Glu1304Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3884A>G
  hgvsp: ENSP00000354467.3:p.Glu1295Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4043A>G
  hgvsp: ENSP00000271715.2:p.Glu1348Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3884A>G
  hgvsp: ENSP00000376484.1:p.Glu1295Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.4016A>G
  hgvsp: ENSP00000386836.1:p.Glu1339Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4191A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3857A>G
  hgvsp: ENSP00000431259.1:p.Glu1286Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu1348Gly
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-151377469-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377469
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3856G>C
  hgvsp: ENSP00000431259.1:p.Glu1286Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.4015G>C
  hgvsp: ENSP00000386836.1:p.Glu1339Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4042G>C
  hgvsp: ENSP00000271715.2:p.Glu1348Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2128G>C
  hgvsp: ENSP00000443547.1:p.Glu710Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3910G>C
  hgvsp: ENSP00000418408.1:p.Glu1304Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4190G>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3883G>C
  hgvsp: ENSP00000376484.1:p.Glu1295Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3883G>C
  hgvsp: ENSP00000354467.3:p.Glu1295Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3757G>C
  hgvsp: ENSP00000357856.2:p.Glu1253Gln
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu1348Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-151377485-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377485
    reference: chr 1
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4026T>G
  hgvsp: ENSP00000271715.2:p.Asn1342Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3840T>G
  hgvsp: ENSP00000431259.1:p.Asn1280Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3999T>G
  hgvsp: ENSP00000386836.1:p.Asn1333Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3867T>G
  hgvsp: ENSP00000376484.1:p.Asn1289Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3867T>G
  hgvsp: ENSP00000354467.3:p.Asn1289Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2112T>G
  hgvsp: ENSP00000443547.1:p.Asn704Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3894T>G
  hgvsp: ENSP00000418408.1:p.Asn1298Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4174T>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3741T>G
  hgvsp: ENSP00000357856.2:p.Asn1247Lys
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn1342Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-151377488-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377488
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377488
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2109A>G
  hgvsp: ENST00000540984.1:c.2109A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3864A>G
  hgvsp: ENST00000361398.3:c.3864A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3738A>G
  hgvsp: ENST00000368863.2:c.3738A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4023A>G
  hgvsp: ENST00000271715.2:c.4023A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3837A>G
  hgvsp: ENST00000531094.1:c.3837A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3864A>G
  hgvsp: ENST00000392723.1:c.3864A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3891A>G
  hgvsp: ENST00000491586.1:c.3891A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3996A>G
  hgvsp: ENST00000409503.1:c.3996A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4171A>G
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg1341Arg
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-151377490-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377490
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2107A>G
  hgvsp: ENSP00000443547.1:p.Arg703Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3862A>G
  hgvsp: ENSP00000376484.1:p.Arg1288Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3862A>G
  hgvsp: ENSP00000354467.3:p.Arg1288Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3736A>G
  hgvsp: ENSP00000357856.2:p.Arg1246Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4169A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3835A>G
  hgvsp: ENSP00000431259.1:p.Arg1279Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3889A>G
  hgvsp: ENSP00000418408.1:p.Arg1297Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3994A>G
  hgvsp: ENSP00000386836.1:p.Arg1332Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4021A>G
  hgvsp: ENSP00000271715.2:p.Arg1341Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9127
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg1341Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-151377491-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377491
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2106A>G
  hgvsp: ENST00000540984.1:c.2106A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3735A>G
  hgvsp: ENST00000368863.2:c.3735A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3993A>G
  hgvsp: ENST00000409503.1:c.3993A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4020A>G
  hgvsp: ENST00000271715.2:c.4020A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3861A>G
  hgvsp: ENST00000392723.1:c.3861A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3861A>G
  hgvsp: ENST00000361398.3:c.3861A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4168A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3834A>G
  hgvsp: ENST00000531094.1:c.3834A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3888A>G
  hgvsp: ENST00000491586.1:c.3888A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40110
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1340Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

1-151377493-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377493
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377493
    reference: chr 1
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3991A>C
  hgvsp: ENSP00000386836.1:p.Thr1331Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3859A>C
  hgvsp: ENSP00000376484.1:p.Thr1287Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3733A>C
  hgvsp: ENSP00000357856.2:p.Thr1245Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3832A>C
  hgvsp: ENSP00000431259.1:p.Thr1278Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3859A>C
  hgvsp: ENSP00000354467.3:p.Thr1287Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4166A>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2104A>C
  hgvsp: ENSP00000443547.1:p.Thr702Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3886A>C
  hgvsp: ENSP00000418408.1:p.Thr1296Pro
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4018A>C
  hgvsp: ENSP00000271715.2:p.Thr1340Pro
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr1340Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-151377504-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377504
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377504
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3848T>C
  hgvsp: ENSP00000376484.1:p.Ile1283Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3722T>C
  hgvsp: ENSP00000357856.2:p.Ile1241Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3848T>C
  hgvsp: ENSP00000354467.3:p.Ile1283Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2093T>C
  hgvsp: ENSP00000443547.1:p.Ile698Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3875T>C
  hgvsp: ENSP00000418408.1:p.Ile1292Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4007T>C
  hgvsp: ENSP00000271715.2:p.Ile1336Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3980T>C
  hgvsp: ENSP00000386836.1:p.Ile1327Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3821T>C
  hgvsp: ENSP00000431259.1:p.Ile1274Thr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4155T>C
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile1336Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum

1-151377507-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377507
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377507
    reference: chr 1
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3845A>G
  hgvsp: ENSP00000376484.1:p.Asn1282Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.4004A>G
  hgvsp: ENSP00000271715.2:p.Asn1335Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3872A>G
  hgvsp: ENSP00000418408.1:p.Asn1291Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3719A>G
  hgvsp: ENSP00000357856.2:p.Asn1240Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2090A>G
  hgvsp: ENSP00000443547.1:p.Asn697Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3977A>G
  hgvsp: ENSP00000386836.1:p.Asn1326Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3818A>G
  hgvsp: ENSP00000431259.1:p.Asn1273Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3845A>G
  hgvsp: ENSP00000354467.3:p.Asn1282Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4152A>G
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4002
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn1335Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-151377514-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377514
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377514
    reference: chr 1
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3970G>A
  hgvsp: ENSP00000386836.1:p.Asp1324Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3838G>A
  hgvsp: ENSP00000354467.3:p.Asp1280Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3838G>A
  hgvsp: ENSP00000376484.1:p.Asp1280Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3712G>A
  hgvsp: ENSP00000357856.2:p.Asp1238Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2083G>A
  hgvsp: ENSP00000443547.1:p.Asp695Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3865G>A
  hgvsp: ENSP00000418408.1:p.Asp1289Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3997G>A
  hgvsp: ENSP00000271715.2:p.Asp1333Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4145G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3811G>A
  hgvsp: ENSP00000431259.1:p.Asp1271Asn
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40224
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp1333Asn
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-151377515-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377515
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377515
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3969C>T
  hgvsp: ENST00000409503.1:c.3969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3864C>T
  hgvsp: ENST00000491586.1:c.3864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4144C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3837C>T
  hgvsp: ENST00000361398.3:c.3837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2082C>T
  hgvsp: ENST00000540984.1:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3711C>T
  hgvsp: ENST00000368863.2:c.3711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3837C>T
  hgvsp: ENST00000392723.1:c.3837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3996C>T
  hgvsp: ENST00000271715.2:c.3996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3810C>T
  hgvsp: ENST00000531094.1:c.3810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40276
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro1332Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

1-151377517-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377517
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377517
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3709C>T
  hgvsp: ENSP00000357856.2:p.Pro1237Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3808C>T
  hgvsp: ENSP00000431259.1:p.Pro1270Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3994C>T
  hgvsp: ENSP00000271715.2:p.Pro1332Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3835C>T
  hgvsp: ENSP00000376484.1:p.Pro1279Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2080C>T
  hgvsp: ENSP00000443547.1:p.Pro694Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4142C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3835C>T
  hgvsp: ENSP00000354467.3:p.Pro1279Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3967C>T
  hgvsp: ENSP00000386836.1:p.Pro1323Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3862C>T
  hgvsp: ENSP00000418408.1:p.Pro1288Ser
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro1332Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-151377518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377518
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377518
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3861C>T
  hgvsp: ENST00000491586.1:c.3861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3834C>T
  hgvsp: ENST00000361398.3:c.3834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3807C>T
  hgvsp: ENST00000531094.1:c.3807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4141C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3708C>T
  hgvsp: ENST00000368863.2:c.3708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3993C>T
  hgvsp: ENST00000271715.2:c.3993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3834C>T
  hgvsp: ENST00000392723.1:c.3834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3966C>T
  hgvsp: ENST00000409503.1:c.3966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2079C>T
  hgvsp: ENST00000540984.1:c.2079C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly1331Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-151377518-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377518
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377518
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2079C>A
  hgvsp: ENST00000540984.1:c.2079C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3993C>A
  hgvsp: ENST00000271715.2:c.3993C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3966C>A
  hgvsp: ENST00000409503.1:c.3966C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4141C>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3807C>A
  hgvsp: ENST00000531094.1:c.3807C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3861C>A
  hgvsp: ENST00000491586.1:c.3861C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3708C>A
  hgvsp: ENST00000368863.2:c.3708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3834C>A
  hgvsp: ENST00000392723.1:c.3834C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3834C>A
  hgvsp: ENST00000361398.3:c.3834C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly1331Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

1-151377522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377522
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377522
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3830C>T
  hgvsp: ENSP00000376484.1:p.Pro1277Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2075C>T
  hgvsp: ENSP00000443547.1:p.Pro692Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3830C>T
  hgvsp: ENSP00000354467.3:p.Pro1277Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3962C>T
  hgvsp: ENSP00000386836.1:p.Pro1321Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3857C>T
  hgvsp: ENSP00000418408.1:p.Pro1286Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3704C>T
  hgvsp: ENSP00000357856.2:p.Pro1235Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3989C>T
  hgvsp: ENSP00000271715.2:p.Pro1330Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3803C>T
  hgvsp: ENSP00000431259.1:p.Pro1268Leu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4137C>T
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro1330Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-151377530-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377530
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377530
    reference: chr 1
allele count: 7
allele frequency: 5.765967611736215e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3822T>C
  hgvsp: ENST00000392723.1:c.3822T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3696T>C
  hgvsp: ENST00000368863.2:c.3696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2067T>C
  hgvsp: ENST00000540984.1:c.2067T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3822T>C
  hgvsp: ENST00000361398.3:c.3822T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4129T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3954T>C
  hgvsp: ENST00000409503.1:c.3954T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3981T>C
  hgvsp: ENST00000271715.2:c.3981T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3849T>C
  hgvsp: ENST00000491586.1:c.3849T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3795T>C
  hgvsp: ENST00000531094.1:c.3795T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser1327Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

1-151377531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377531
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377531
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3848G>A
  hgvsp: ENSP00000418408.1:p.Ser1283Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3980G>A
  hgvsp: ENSP00000271715.2:p.Ser1327Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3821G>A
  hgvsp: ENSP00000376484.1:p.Ser1274Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3953G>A
  hgvsp: ENSP00000386836.1:p.Ser1318Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3794G>A
  hgvsp: ENSP00000431259.1:p.Ser1265Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2066G>A
  hgvsp: ENSP00000443547.1:p.Ser689Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4128G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3821G>A
  hgvsp: ENSP00000354467.3:p.Ser1274Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3695G>A
  hgvsp: ENSP00000357856.2:p.Ser1232Asn
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser1327Asn
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

1-151377532-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377532
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377532
    reference: chr 1
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3847A>G
  hgvsp: ENSP00000418408.1:p.Ser1283Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2065A>G
  hgvsp: ENSP00000443547.1:p.Ser689Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3979A>G
  hgvsp: ENSP00000271715.2:p.Ser1327Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3793A>G
  hgvsp: ENSP00000431259.1:p.Ser1265Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3694A>G
  hgvsp: ENSP00000357856.2:p.Ser1232Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4127A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3952A>G
  hgvsp: ENSP00000386836.1:p.Ser1318Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3820A>G
  hgvsp: ENSP00000376484.1:p.Ser1274Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3820A>G
  hgvsp: ENSP00000354467.3:p.Ser1274Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser1327Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-151377536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377536
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377536
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3948G>A
  hgvsp: ENST00000409503.1:c.3948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3975G>A
  hgvsp: ENST00000271715.2:c.3975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3690G>A
  hgvsp: ENST00000368863.2:c.3690G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3816G>A
  hgvsp: ENST00000392723.1:c.3816G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3789G>A
  hgvsp: ENST00000531094.1:c.3789G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3816G>A
  hgvsp: ENST00000361398.3:c.3816G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3843G>A
  hgvsp: ENST00000491586.1:c.3843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2061G>A
  hgvsp: ENST00000540984.1:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4123G>A
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val1325Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-151377540-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377540
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377540
    reference: chr 1
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3812T>A
  hgvsp: ENSP00000376484.1:p.Leu1271Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3944T>A
  hgvsp: ENSP00000386836.1:p.Leu1315Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3686T>A
  hgvsp: ENSP00000357856.2:p.Leu1229Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3812T>A
  hgvsp: ENSP00000354467.3:p.Leu1271Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4119T>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2057T>A
  hgvsp: ENSP00000443547.1:p.Leu686Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3839T>A
  hgvsp: ENSP00000418408.1:p.Leu1280Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3785T>A
  hgvsp: ENSP00000431259.1:p.Leu1262Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3971T>A
  hgvsp: ENSP00000271715.2:p.Leu1324Gln
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu1324Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

1-151377541-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377541
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377541
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3811C>G
  hgvsp: ENSP00000354467.3:p.Leu1271Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3943C>G
  hgvsp: ENSP00000386836.1:p.Leu1315Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3811C>G
  hgvsp: ENSP00000376484.1:p.Leu1271Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3685C>G
  hgvsp: ENSP00000357856.2:p.Leu1229Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3838C>G
  hgvsp: ENSP00000418408.1:p.Leu1280Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4118C>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3784C>G
  hgvsp: ENSP00000431259.1:p.Leu1262Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3970C>G
  hgvsp: ENSP00000271715.2:p.Leu1324Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2056C>G
  hgvsp: ENSP00000443547.1:p.Leu686Val
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu1324Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-151377549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377549
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377549
    reference: chr 1
allele count: 9
allele frequency: 7.413386929375134e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3677G>A
  hgvsp: ENSP00000357856.2:p.Arg1226His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3803G>A
  hgvsp: ENSP00000354467.3:p.Arg1268His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3830G>A
  hgvsp: ENSP00000418408.1:p.Arg1277His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4110G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3935G>A
  hgvsp: ENSP00000386836.1:p.Arg1312His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3962G>A
  hgvsp: ENSP00000271715.2:p.Arg1321His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3776G>A
  hgvsp: ENSP00000431259.1:p.Arg1259His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3803G>A
  hgvsp: ENSP00000376484.1:p.Arg1268His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2048G>A
  hgvsp: ENSP00000443547.1:p.Arg683His
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg1321His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-151377553-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377553
    reference: chr 1
allele count: 26
allele frequency: 2.141503994728606e-4
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3799C>G
  hgvsp: ENSP00000354467.3:p.Gln1267Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4106C>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3931C>G
  hgvsp: ENSP00000386836.1:p.Gln1311Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3826C>G
  hgvsp: ENSP00000418408.1:p.Gln1276Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3799C>G
  hgvsp: ENSP00000376484.1:p.Gln1267Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2044C>G
  hgvsp: ENSP00000443547.1:p.Gln682Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3958C>G
  hgvsp: ENSP00000271715.2:p.Gln1320Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3772C>G
  hgvsp: ENSP00000431259.1:p.Gln1258Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3673C>G
  hgvsp: ENSP00000357856.2:p.Gln1225Glu
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln1320Glu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

1-151377560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377560
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377560
    reference: chr 1
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3792G>A
  hgvsp: ENST00000392723.1:c.3792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3924G>A
  hgvsp: ENST00000409503.1:c.3924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3666G>A
  hgvsp: ENST00000368863.2:c.3666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3951G>A
  hgvsp: ENST00000271715.2:c.3951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3765G>A
  hgvsp: ENST00000531094.1:c.3765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4099G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3819G>A
  hgvsp: ENST00000491586.1:c.3819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3792G>A
  hgvsp: ENST00000361398.3:c.3792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2037G>A
  hgvsp: ENST00000540984.1:c.2037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1317Glu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-151377580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377580
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377580
    reference: chr 1
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3772G>A
  hgvsp: ENSP00000376484.1:p.Val1258Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4079G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3745G>A
  hgvsp: ENSP00000431259.1:p.Val1249Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2017G>A
  hgvsp: ENSP00000443547.1:p.Val673Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3931G>A
  hgvsp: ENSP00000271715.2:p.Val1311Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3772G>A
  hgvsp: ENSP00000354467.3:p.Val1258Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3799G>A
  hgvsp: ENSP00000418408.1:p.Val1267Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3646G>A
  hgvsp: ENSP00000357856.2:p.Val1216Ile
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3904G>A
  hgvsp: ENSP00000386836.1:p.Val1302Ile
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val1311Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-151377581-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377581
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377581
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3744T>C
  hgvsp: ENST00000531094.1:c.3744T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3930T>C
  hgvsp: ENST00000271715.2:c.3930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2016T>C
  hgvsp: ENST00000540984.1:c.2016T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3798T>C
  hgvsp: ENST00000491586.1:c.3798T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3903T>C
  hgvsp: ENST00000409503.1:c.3903T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3645T>C
  hgvsp: ENST00000368863.2:c.3645T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3771T>C
  hgvsp: ENST00000392723.1:c.3771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3771T>C
  hgvsp: ENST00000361398.3:c.3771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4078T>C
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly1310Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ

1-151377595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377595
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377595
    reference: chr 1
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4064G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.2002G>A
  hgvsp: ENSP00000443547.1:p.Gly668Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3916G>A
  hgvsp: ENSP00000271715.2:p.Gly1306Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3889G>A
  hgvsp: ENSP00000386836.1:p.Gly1297Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3631G>A
  hgvsp: ENSP00000357856.2:p.Gly1211Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3730G>A
  hgvsp: ENSP00000431259.1:p.Gly1244Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3757G>A
  hgvsp: ENSP00000376484.1:p.Gly1253Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3784G>A
  hgvsp: ENSP00000418408.1:p.Gly1262Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3757G>A
  hgvsp: ENSP00000354467.3:p.Gly1253Ser
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly1306Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

1-151377602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377602
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377602
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3750C>T
  hgvsp: ENST00000392723.1:c.3750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3723C>T
  hgvsp: ENST00000531094.1:c.3723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3777C>T
  hgvsp: ENST00000491586.1:c.3777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3882C>T
  hgvsp: ENST00000409503.1:c.3882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3624C>T
  hgvsp: ENST00000368863.2:c.3624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3750C>T
  hgvsp: ENST00000361398.3:c.3750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3909C>T
  hgvsp: ENST00000271715.2:c.3909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4057C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1995C>T
  hgvsp: ENST00000540984.1:c.1995C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val1303Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-151377605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377605
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377605
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1992T>C
  hgvsp: ENST00000540984.1:c.1992T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3747T>C
  hgvsp: ENST00000361398.3:c.3747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3906T>C
  hgvsp: ENST00000271715.2:c.3906T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3747T>C
  hgvsp: ENST00000392723.1:c.3747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3774T>C
  hgvsp: ENST00000491586.1:c.3774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3879T>C
  hgvsp: ENST00000409503.1:c.3879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3720T>C
  hgvsp: ENST00000531094.1:c.3720T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4054T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3621T>C
  hgvsp: ENST00000368863.2:c.3621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Leu1302Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-151377613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377613
    reference: chr 1
allele count: 10
allele frequency: 8.236553825879252e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3871C>T
  hgvsp: ENST00000409503.1:c.3871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4046C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3766C>T
  hgvsp: ENST00000491586.1:c.3766C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3739C>T
  hgvsp: ENST00000361398.3:c.3739C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3739C>T
  hgvsp: ENST00000392723.1:c.3739C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3712C>T
  hgvsp: ENST00000531094.1:c.3712C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1984C>T
  hgvsp: ENST00000540984.1:c.1984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3613C>T
  hgvsp: ENST00000368863.2:c.3613C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3898C>T
  hgvsp: ENST00000271715.2:c.3898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu1300Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-151377618-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377618
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377618
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3893T>G
  hgvsp: ENSP00000271715.2:p.Leu1298Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3608T>G
  hgvsp: ENSP00000357856.2:p.Leu1203Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1979T>G
  hgvsp: ENSP00000443547.1:p.Leu660Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3761T>G
  hgvsp: ENSP00000418408.1:p.Leu1254Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3734T>G
  hgvsp: ENSP00000376484.1:p.Leu1245Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3866T>G
  hgvsp: ENSP00000386836.1:p.Leu1289Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3734T>G
  hgvsp: ENSP00000354467.3:p.Leu1245Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4041T>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3707T>G
  hgvsp: ENSP00000431259.1:p.Leu1236Arg
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9168
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu1298Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

1-151377624-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377624
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377624
    reference: chr 1
allele count: 16
allele frequency: 1.317892031695303e-4
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3701T>C
  hgvsp: ENSP00000431259.1:p.Val1234Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3887T>C
  hgvsp: ENSP00000271715.2:p.Val1296Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3728T>C
  hgvsp: ENSP00000376484.1:p.Val1243Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3728T>C
  hgvsp: ENSP00000354467.3:p.Val1243Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3602T>C
  hgvsp: ENSP00000357856.2:p.Val1201Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1973T>C
  hgvsp: ENSP00000443547.1:p.Val658Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3755T>C
  hgvsp: ENSP00000418408.1:p.Val1252Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4035T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3860T>C
  hgvsp: ENSP00000386836.1:p.Val1287Ala
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val1296Ala
num of homozygotes: 1
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

1-151377627-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377627
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377627
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1970A>T
  hgvsp: ENSP00000443547.1:p.Asp657Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3725A>T
  hgvsp: ENSP00000354467.3:p.Asp1242Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3857A>T
  hgvsp: ENSP00000386836.1:p.Asp1286Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3725A>T
  hgvsp: ENSP00000376484.1:p.Asp1242Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3752A>T
  hgvsp: ENSP00000418408.1:p.Asp1251Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3884A>T
  hgvsp: ENSP00000271715.2:p.Asp1295Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3599A>T
  hgvsp: ENSP00000357856.2:p.Asp1200Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3698A>T
  hgvsp: ENSP00000431259.1:p.Asp1233Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4032A>T
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp1295Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-151377647-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377647
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377647
    reference: chr 1
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3705A>T
  hgvsp: ENST00000392723.1:c.3705A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3678A>T
  hgvsp: ENST00000531094.1:c.3678A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3864A>T
  hgvsp: ENST00000271715.2:c.3864A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4012A>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3579A>T
  hgvsp: ENST00000368863.2:c.3579A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3705A>T
  hgvsp: ENST00000361398.3:c.3705A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3837A>T
  hgvsp: ENST00000409503.1:c.3837A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3732A>T
  hgvsp: ENST00000491586.1:c.3732A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1950A>T
  hgvsp: ENST00000540984.1:c.1950A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala1288Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-151377648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377648
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377648
    reference: chr 1
allele count: 16
allele frequency: 1.318239491159556e-4
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3863C>T
  hgvsp: ENSP00000271715.2:p.Ala1288Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3836C>T
  hgvsp: ENSP00000386836.1:p.Ala1279Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3704C>T
  hgvsp: ENSP00000376484.1:p.Ala1235Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3677C>T
  hgvsp: ENSP00000431259.1:p.Ala1226Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3731C>T
  hgvsp: ENSP00000418408.1:p.Ala1244Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3704C>T
  hgvsp: ENSP00000354467.3:p.Ala1235Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3578C>T
  hgvsp: ENSP00000357856.2:p.Ala1193Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4011C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1949C>T
  hgvsp: ENSP00000443547.1:p.Ala650Val
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9154
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala1288Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-151377652-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377652
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377652
    reference: chr 1
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3673A>G
  hgvsp: ENSP00000431259.1:p.Met1225Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3700A>G
  hgvsp: ENSP00000376484.1:p.Met1234Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3832A>G
  hgvsp: ENSP00000386836.1:p.Met1278Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3700A>G
  hgvsp: ENSP00000354467.3:p.Met1234Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3727A>G
  hgvsp: ENSP00000418408.1:p.Met1243Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1945A>G
  hgvsp: ENSP00000443547.1:p.Met649Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4007A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3859A>G
  hgvsp: ENSP00000271715.2:p.Met1287Val
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3574A>G
  hgvsp: ENSP00000357856.2:p.Met1192Val
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met1287Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

1-151377656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377656
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377656
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3696G>A
  hgvsp: ENST00000361398.3:c.3696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3828G>A
  hgvsp: ENST00000409503.1:c.3828G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3723G>A
  hgvsp: ENST00000491586.1:c.3723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3855G>A
  hgvsp: ENST00000271715.2:c.3855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3570G>A
  hgvsp: ENST00000368863.2:c.3570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1941G>A
  hgvsp: ENST00000540984.1:c.1941G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3669G>A
  hgvsp: ENST00000531094.1:c.3669G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3696G>A
  hgvsp: ENST00000392723.1:c.3696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4003G>A
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1285Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-151377657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377657
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377657
    reference: chr 1
allele count: 9
allele frequency: 7.416563658838072e-5
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3827G>A
  hgvsp: ENSP00000386836.1:p.Arg1276Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4002G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1940G>A
  hgvsp: ENSP00000443547.1:p.Arg647Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3668G>A
  hgvsp: ENSP00000431259.1:p.Arg1223Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3854G>A
  hgvsp: ENSP00000271715.2:p.Arg1285Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3695G>A
  hgvsp: ENSP00000376484.1:p.Arg1232Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3722G>A
  hgvsp: ENSP00000418408.1:p.Arg1241Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3569G>A
  hgvsp: ENSP00000357856.2:p.Arg1190Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3695G>A
  hgvsp: ENSP00000354467.3:p.Arg1232Gln
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg1285Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS

1-151377658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377658
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377658
    reference: chr 1
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.4001C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3568C>T
  hgvsp: ENSP00000357856.2:p.Arg1190Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3826C>T
  hgvsp: ENSP00000386836.1:p.Arg1276Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3694C>T
  hgvsp: ENSP00000376484.1:p.Arg1232Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1939C>T
  hgvsp: ENSP00000443547.1:p.Arg647Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3721C>T
  hgvsp: ENSP00000418408.1:p.Arg1241Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3667C>T
  hgvsp: ENSP00000431259.1:p.Arg1223Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3853C>T
  hgvsp: ENSP00000271715.2:p.Arg1285Trp
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3694C>T
  hgvsp: ENSP00000354467.3:p.Arg1232Trp
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24533
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1285Trp
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

1-151377663-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377663
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377663
    reference: chr 1
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3563A>G
  hgvsp: ENSP00000357856.2:p.Gln1188Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3716A>G
  hgvsp: ENSP00000418408.1:p.Gln1239Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3821A>G
  hgvsp: ENSP00000386836.1:p.Gln1274Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3996A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3689A>G
  hgvsp: ENSP00000376484.1:p.Gln1230Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3689A>G
  hgvsp: ENSP00000354467.3:p.Gln1230Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3848A>G
  hgvsp: ENSP00000271715.2:p.Gln1283Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3662A>G
  hgvsp: ENSP00000431259.1:p.Gln1221Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1934A>G
  hgvsp: ENSP00000443547.1:p.Gln645Arg
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln1283Arg
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-151377692-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377692
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377692
    reference: chr 1
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3687G>C
  hgvsp: ENSP00000418408.1:p.Lys1229Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1905G>C
  hgvsp: ENSP00000443547.1:p.Lys635Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3660G>C
  hgvsp: ENSP00000354467.3:p.Lys1220Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3660G>C
  hgvsp: ENSP00000376484.1:p.Lys1220Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3792G>C
  hgvsp: ENSP00000386836.1:p.Lys1264Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3819G>C
  hgvsp: ENSP00000271715.2:p.Lys1273Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3967G>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3534G>C
  hgvsp: ENSP00000357856.2:p.Lys1178Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3633G>C
  hgvsp: ENSP00000431259.1:p.Lys1211Asn
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys1273Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-151377698-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377698
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3654T>C
  hgvsp: ENST00000361398.3:c.3654T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3681T>C
  hgvsp: ENST00000491586.1:c.3681T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3654T>C
  hgvsp: ENST00000392723.1:c.3654T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3813T>C
  hgvsp: ENST00000271715.2:c.3813T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3961T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3786T>C
  hgvsp: ENST00000409503.1:c.3786T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3627T>C
  hgvsp: ENST00000531094.1:c.3627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1899T>C
  hgvsp: ENST00000540984.1:c.1899T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3528T>C
  hgvsp: ENST00000368863.2:c.3528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr1271Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-151377722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377722
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377722
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3937A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3657A>G
  hgvsp: ENST00000491586.1:c.3657A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3762A>G
  hgvsp: ENST00000409503.1:c.3762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1875A>G
  hgvsp: ENST00000540984.1:c.1875A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3504A>G
  hgvsp: ENST00000368863.2:c.3504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3789A>G
  hgvsp: ENST00000271715.2:c.3789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3630A>G
  hgvsp: ENST00000361398.3:c.3630A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3603A>G
  hgvsp: ENST00000531094.1:c.3603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3630A>G
  hgvsp: ENST00000392723.1:c.3630A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro1263Pro
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-151377738-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377738
    reference: chr 1
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3641G>A
  hgvsp: ENSP00000418408.1:p.Ser1214Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3587G>A
  hgvsp: ENSP00000431259.1:p.Ser1196Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3614G>A
  hgvsp: ENSP00000354467.3:p.Ser1205Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3921G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1859G>A
  hgvsp: ENSP00000443547.1:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3773G>A
  hgvsp: ENSP00000271715.2:p.Ser1258Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3614G>A
  hgvsp: ENSP00000376484.1:p.Ser1205Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3488G>A
  hgvsp: ENSP00000357856.2:p.Ser1163Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3746G>A
  hgvsp: ENSP00000386836.1:p.Ser1249Asn
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser1258Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-151377744-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377744
    reference: chr 1
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3915G>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3608G>C
  hgvsp: ENSP00000354467.3:p.Gly1203Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3608G>C
  hgvsp: ENSP00000376484.1:p.Gly1203Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3482G>C
  hgvsp: ENSP00000357856.2:p.Gly1161Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1853G>C
  hgvsp: ENSP00000443547.1:p.Gly618Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3635G>C
  hgvsp: ENSP00000418408.1:p.Gly1212Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3740G>C
  hgvsp: ENSP00000386836.1:p.Gly1247Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3581G>C
  hgvsp: ENSP00000431259.1:p.Gly1194Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3767G>C
  hgvsp: ENSP00000271715.2:p.Gly1256Ala
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3927
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly1256Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-151377779-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377779
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377779
    reference: chr 1
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3573T>C
  hgvsp: ENST00000392723.1:c.3573T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1818T>C
  hgvsp: ENST00000540984.1:c.1818T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3546T>C
  hgvsp: ENST00000531094.1:c.3546T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3705T>C
  hgvsp: ENST00000409503.1:c.3705T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3600T>C
  hgvsp: ENST00000491586.1:c.3600T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3447T>C
  hgvsp: ENST00000368863.2:c.3447T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3880T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3732T>C
  hgvsp: ENST00000271715.2:c.3732T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3573T>C
  hgvsp: ENST00000361398.3:c.3573T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser1244Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

1-151377782-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377782
    reference: chr 1
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3597T>C
  hgvsp: ENST00000491586.1:c.3597T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3570T>C
  hgvsp: ENST00000392723.1:c.3570T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3444T>C
  hgvsp: ENST00000368863.2:c.3444T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3543T>C
  hgvsp: ENST00000531094.1:c.3543T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3877T>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3570T>C
  hgvsp: ENST00000361398.3:c.3570T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3702T>C
  hgvsp: ENST00000409503.1:c.3702T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1815T>C
  hgvsp: ENST00000540984.1:c.1815T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3729T>C
  hgvsp: ENST00000271715.2:c.3729T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1243Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-151377815-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377815
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377815
    reference: chr 1
allele count: 3
allele frequency: 2.473981956424931e-5
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3510C>T
  hgvsp: ENST00000531094.1:c.3510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3696C>T
  hgvsp: ENST00000271715.2:c.3696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1782C>T
  hgvsp: ENST00000540984.1:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3537C>T
  hgvsp: ENST00000361398.3:c.3537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3669C>T
  hgvsp: ENST00000409503.1:c.3669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3411C>T
  hgvsp: ENST00000368863.2:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3537C>T
  hgvsp: ENST00000392723.1:c.3537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3564C>T
  hgvsp: ENST00000491586.1:c.3564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3844C>T
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24850
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg1232Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

1-151377833-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377833
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377833
    reference: chr 1
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3826T>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1764T>A
  hgvsp: ENST00000540984.1:c.1764T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3651T>A
  hgvsp: ENST00000409503.1:c.3651T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3519T>A
  hgvsp: ENST00000361398.3:c.3519T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3492T>A
  hgvsp: ENST00000531094.1:c.3492T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3393T>A
  hgvsp: ENST00000368863.2:c.3393T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3519T>A
  hgvsp: ENST00000392723.1:c.3519T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3546T>A
  hgvsp: ENST00000491586.1:c.3546T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3678T>A
  hgvsp: ENST00000271715.2:c.3678T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1226Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-151377841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377841
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377841
    reference: chr 1
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3511G>A
  hgvsp: ENSP00000354467.3:p.Gly1171Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1756G>A
  hgvsp: ENSP00000443547.1:p.Gly586Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3538G>A
  hgvsp: ENSP00000418408.1:p.Gly1180Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3511G>A
  hgvsp: ENSP00000376484.1:p.Gly1171Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3484G>A
  hgvsp: ENSP00000431259.1:p.Gly1162Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3818G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3643G>A
  hgvsp: ENSP00000386836.1:p.Gly1215Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3385G>A
  hgvsp: ENSP00000357856.2:p.Gly1129Ser
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3670G>A
  hgvsp: ENSP00000271715.2:p.Gly1224Ser
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24521
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly1224Ser
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

1-151377845-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377845
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377845
    reference: chr 1
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3814C>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3381C>A
  hgvsp: ENSP00000357856.2:p.Ser1127Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3639C>A
  hgvsp: ENSP00000386836.1:p.Ser1213Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3480C>A
  hgvsp: ENSP00000431259.1:p.Ser1160Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3534C>A
  hgvsp: ENSP00000418408.1:p.Ser1178Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1752C>A
  hgvsp: ENSP00000443547.1:p.Ser584Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3507C>A
  hgvsp: ENSP00000376484.1:p.Ser1169Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3507C>A
  hgvsp: ENSP00000354467.3:p.Ser1169Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3666C>A
  hgvsp: ENSP00000271715.2:p.Ser1222Arg
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8942
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser1222Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

1-151377849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377849
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377849
    reference: chr 1
allele count: 2
allele frequency: 1.650546330835507e-5
allele num: 121172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3377G>A
  hgvsp: ENSP00000357856.2:p.Arg1126His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3810G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3530G>A
  hgvsp: ENSP00000418408.1:p.Arg1177His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3503G>A
  hgvsp: ENSP00000354467.3:p.Arg1168His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3503G>A
  hgvsp: ENSP00000376484.1:p.Arg1168His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3635G>A
  hgvsp: ENSP00000386836.1:p.Arg1212His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3476G>A
  hgvsp: ENSP00000431259.1:p.Arg1159His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1748G>A
  hgvsp: ENSP00000443547.1:p.Arg583His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3662G>A
  hgvsp: ENSP00000271715.2:p.Arg1221His
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15140
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg1221His
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

1-151377851-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377851
    reference: chr 1
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1746G>C
  hgvsp: ENSP00000443547.1:p.Gln582His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3808G>C
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3528G>C
  hgvsp: ENSP00000418408.1:p.Gln1176His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3501G>C
  hgvsp: ENSP00000354467.3:p.Gln1167His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3375G>C
  hgvsp: ENSP00000357856.2:p.Gln1125His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3660G>C
  hgvsp: ENSP00000271715.2:p.Gln1220His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3501G>C
  hgvsp: ENSP00000376484.1:p.Gln1167His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3633G>C
  hgvsp: ENSP00000386836.1:p.Gln1211His
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3474G>C
  hgvsp: ENSP00000431259.1:p.Gln1158His
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln1220His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-151377852-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377852
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377852
    reference: chr 1
allele count: 6
allele frequency: 4.95074013565028e-5
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3500A>G
  hgvsp: ENSP00000354467.3:p.Gln1167Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3527A>G
  hgvsp: ENSP00000418408.1:p.Gln1176Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3500A>G
  hgvsp: ENSP00000376484.1:p.Gln1167Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3807A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3374A>G
  hgvsp: ENSP00000357856.2:p.Gln1125Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3659A>G
  hgvsp: ENSP00000271715.2:p.Gln1220Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1745A>G
  hgvsp: ENSP00000443547.1:p.Gln582Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3632A>G
  hgvsp: ENSP00000386836.1:p.Gln1211Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3473A>G
  hgvsp: ENSP00000431259.1:p.Gln1158Arg
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln1220Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-151377853-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377853
    reference: chr 1
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3526C>G
  hgvsp: ENSP00000418408.1:p.Gln1176Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3806C>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3472C>G
  hgvsp: ENSP00000431259.1:p.Gln1158Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3631C>G
  hgvsp: ENSP00000386836.1:p.Gln1211Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3373C>G
  hgvsp: ENSP00000357856.2:p.Gln1125Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3658C>G
  hgvsp: ENSP00000271715.2:p.Gln1220Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3499C>G
  hgvsp: ENSP00000376484.1:p.Gln1167Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3499C>G
  hgvsp: ENSP00000354467.3:p.Gln1167Glu
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1744C>G
  hgvsp: ENSP00000443547.1:p.Gln582Glu
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8941
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln1220Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-151377856-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377856
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377856
    reference: chr 1
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3496T>G
  hgvsp: ENSP00000376484.1:p.Cys1166Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3628T>G
  hgvsp: ENSP00000386836.1:p.Cys1210Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3803T>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1741T>G
  hgvsp: ENSP00000443547.1:p.Cys581Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3469T>G
  hgvsp: ENSP00000431259.1:p.Cys1157Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3496T>G
  hgvsp: ENSP00000354467.3:p.Cys1166Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3370T>G
  hgvsp: ENSP00000357856.2:p.Cys1124Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3523T>G
  hgvsp: ENSP00000418408.1:p.Cys1175Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3655T>G
  hgvsp: ENSP00000271715.2:p.Cys1219Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys1219Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

1-151377863-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377863
    reference: chr 1
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1734C>A
  hgvsp: ENSP00000443547.1:p.His578Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3462C>A
  hgvsp: ENSP00000431259.1:p.His1154Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3621C>A
  hgvsp: ENSP00000386836.1:p.His1207Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3648C>A
  hgvsp: ENSP00000271715.2:p.His1216Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3796C>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3489C>A
  hgvsp: ENSP00000376484.1:p.His1163Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3363C>A
  hgvsp: ENSP00000357856.2:p.His1121Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3489C>A
  hgvsp: ENSP00000354467.3:p.His1163Gln
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3516C>A
  hgvsp: ENSP00000418408.1:p.His1172Gln
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His1216Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-151377865-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377865
    reference: chr 1
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3514C>T
  hgvsp: ENSP00000418408.1:p.His1172Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3460C>T
  hgvsp: ENSP00000431259.1:p.His1154Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3487C>T
  hgvsp: ENSP00000376484.1:p.His1163Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1732C>T
  hgvsp: ENSP00000443547.1:p.His578Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3619C>T
  hgvsp: ENSP00000386836.1:p.His1207Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3487C>T
  hgvsp: ENSP00000354467.3:p.His1163Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3646C>T
  hgvsp: ENSP00000271715.2:p.His1216Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3361C>T
  hgvsp: ENSP00000357856.2:p.His1121Tyr
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3794C>T
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His1216Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-151377866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377866
    reference: chr 1
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3486G>A
  hgvsp: ENST00000392723.1:c.3486G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3360G>A
  hgvsp: ENST00000368863.2:c.3360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3459G>A
  hgvsp: ENST00000531094.1:c.3459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3618G>A
  hgvsp: ENST00000409503.1:c.3618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3645G>A
  hgvsp: ENST00000271715.2:c.3645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1731G>A
  hgvsp: ENST00000540984.1:c.1731G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3486G>A
  hgvsp: ENST00000361398.3:c.3486G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3513G>A
  hgvsp: ENST00000491586.1:c.3513G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3793G>A
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39151
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys1215Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-151377870-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377870
    reference: chr 1
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3482A>G
  hgvsp: ENSP00000354467.3:p.Gln1161Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3509A>G
  hgvsp: ENSP00000418408.1:p.Gln1170Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3482A>G
  hgvsp: ENSP00000376484.1:p.Gln1161Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3789A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3356A>G
  hgvsp: ENSP00000357856.2:p.Gln1119Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3614A>G
  hgvsp: ENSP00000386836.1:p.Gln1205Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3455A>G
  hgvsp: ENSP00000431259.1:p.Gln1152Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1727A>G
  hgvsp: ENSP00000443547.1:p.Gln576Arg
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3641A>G
  hgvsp: ENSP00000271715.2:p.Gln1214Arg
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln1214Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

1-151377883-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377883
    reference: chr 1
allele count: 2
allele frequency: 1.649811096629436e-5
allele num: 121226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1714A>G
  hgvsp: ENSP00000443547.1:p.Thr572Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3601A>G
  hgvsp: ENSP00000386836.1:p.Thr1201Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3343A>G
  hgvsp: ENSP00000357856.2:p.Thr1115Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3628A>G
  hgvsp: ENSP00000271715.2:p.Thr1210Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3496A>G
  hgvsp: ENSP00000418408.1:p.Thr1166Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3469A>G
  hgvsp: ENSP00000354467.3:p.Thr1157Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3469A>G
  hgvsp: ENSP00000376484.1:p.Thr1157Ala
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3776A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3442A>G
  hgvsp: ENSP00000431259.1:p.Thr1148Ala
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr1210Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

1-151377904-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377904
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377904
    reference: chr 1
allele count: 3
allele frequency: 2.473777953690877e-5
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3755G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3607G>A
  hgvsp: ENSP00000271715.2:p.Glu1203Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3322G>A
  hgvsp: ENSP00000357856.2:p.Glu1108Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1693G>A
  hgvsp: ENSP00000443547.1:p.Glu565Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3580G>A
  hgvsp: ENSP00000386836.1:p.Glu1194Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3475G>A
  hgvsp: ENSP00000418408.1:p.Glu1159Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3448G>A
  hgvsp: ENSP00000354467.3:p.Glu1150Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3448G>A
  hgvsp: ENSP00000376484.1:p.Glu1150Lys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3421G>A
  hgvsp: ENSP00000431259.1:p.Glu1141Lys
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu1203Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

1-151377905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377905
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377905
    reference: chr 1
allele count: 2
allele frequency: 1.649076517150396e-5
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3447C>T
  hgvsp: ENST00000361398.3:c.3447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3606C>T
  hgvsp: ENST00000271715.2:c.3606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3579C>T
  hgvsp: ENST00000409503.1:c.3579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3754C>T
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3321C>T
  hgvsp: ENST00000368863.2:c.3321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1692C>T
  hgvsp: ENST00000540984.1:c.1692C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3420C>T
  hgvsp: ENST00000531094.1:c.3420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3474C>T
  hgvsp: ENST00000491586.1:c.3474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3447C>T
  hgvsp: ENST00000392723.1:c.3447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp1202Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

1-151377912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377912
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377912
    reference: chr 1
allele count: 3
allele frequency: 2.473247704001715e-5
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3440G>A
  hgvsp: ENSP00000354467.3:p.Ser1147Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3599G>A
  hgvsp: ENSP00000271715.2:p.Ser1200Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3747G>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3440G>A
  hgvsp: ENSP00000376484.1:p.Ser1147Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1685G>A
  hgvsp: ENSP00000443547.1:p.Ser562Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3572G>A
  hgvsp: ENSP00000386836.1:p.Ser1191Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3413G>A
  hgvsp: ENSP00000431259.1:p.Ser1138Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3314G>A
  hgvsp: ENSP00000357856.2:p.Ser1105Asn
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3467G>A
  hgvsp: ENSP00000418408.1:p.Ser1156Asn
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40281
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1200Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

1-151377913-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377913
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377913
    reference: chr 1
allele count: 9
allele frequency: 7.418519922847392e-5
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3313A>G
  hgvsp: ENSP00000357856.2:p.Ser1105Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3439A>G
  hgvsp: ENSP00000376484.1:p.Ser1147Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3466A>G
  hgvsp: ENSP00000418408.1:p.Ser1156Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3412A>G
  hgvsp: ENSP00000431259.1:p.Ser1138Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3571A>G
  hgvsp: ENSP00000386836.1:p.Ser1191Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3439A>G
  hgvsp: ENSP00000354467.3:p.Ser1147Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3746A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1684A>G
  hgvsp: ENSP00000443547.1:p.Ser562Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3598A>G
  hgvsp: ENSP00000271715.2:p.Ser1200Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser1200Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

1-151377914-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377914
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377914
    reference: chr 1
allele count: 146
allele frequency: 1.221961834616672e-3
allele num: 119480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3312C>A
  hgvsp: ENSP00000357856.2:p.Tyr1104Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3438C>A
  hgvsp: ENSP00000354467.3:p.Tyr1146Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3438C>A
  hgvsp: ENSP00000376484.1:p.Tyr1146Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3745C>A
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1683C>A
  hgvsp: ENSP00000443547.1:p.Tyr561Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3597C>A
  hgvsp: ENSP00000271715.2:p.Tyr1199Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3465C>A
  hgvsp: ENSP00000418408.1:p.Tyr1155Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3570C>A
  hgvsp: ENSP00000386836.1:p.Tyr1190Ter
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3411C>A
  hgvsp: ENSP00000431259.1:p.Tyr1137Ter
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 24841
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9632
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 9.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 15034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 40027
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 4
hgvs: p.Tyr1199Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

1-151377915-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377915
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377915
    reference: chr 1
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3569A>G
  hgvsp: ENSP00000386836.1:p.Tyr1190Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3437A>G
  hgvsp: ENSP00000354467.3:p.Tyr1146Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3464A>G
  hgvsp: ENSP00000418408.1:p.Tyr1155Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1682A>G
  hgvsp: ENSP00000443547.1:p.Tyr561Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3596A>G
  hgvsp: ENSP00000271715.2:p.Tyr1199Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3437A>G
  hgvsp: ENSP00000376484.1:p.Tyr1146Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3410A>G
  hgvsp: ENSP00000431259.1:p.Tyr1137Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3311A>G
  hgvsp: ENSP00000357856.2:p.Tyr1104Cys
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3744A>G
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40734
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr1199Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

1-151377920-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377920
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377920
    reference: chr 1
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3432T>C
  hgvsp: ENST00000392723.1:c.3432T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1677T>C
  hgvsp: ENST00000540984.1:c.1677T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3306T>C
  hgvsp: ENST00000368863.2:c.3306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3591T>C
  hgvsp: ENST00000271715.2:c.3591T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3459T>C
  hgvsp: ENST00000491586.1:c.3459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3405T>C
  hgvsp: ENST00000531094.1:c.3405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3432T>C
  hgvsp: ENST00000361398.3:c.3432T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3564T>C
  hgvsp: ENST00000409503.1:c.3564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3739T>C
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser1197Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

1-151377922-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151377922
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151377922
    reference: chr 1
allele count: 3
allele frequency: 2.472065658063878e-5
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000376484
  ensembl transcript: ENST00000392723
  gene symbol: POGZ
  hgvsc: ENST00000392723.1:c.3430A>G
  hgvsp: ENSP00000376484.1:p.Ser1144Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000431259
  ensembl transcript: ENST00000531094
  gene symbol: POGZ
  hgvsc: ENST00000531094.1:c.3403A>G
  hgvsp: ENSP00000431259.1:p.Ser1135Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000354467
  ensembl transcript: ENST00000361398
  gene symbol: POGZ
  hgvsc: ENST00000361398.3:c.3430A>G
  hgvsp: ENSP00000354467.3:p.Ser1144Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000386836
  ensembl transcript: ENST00000409503
  gene symbol: POGZ
  hgvsc: ENST00000409503.1:c.3562A>G
  hgvsp: ENSP00000386836.1:p.Ser1188Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000443547
  ensembl transcript: ENST00000540984
  gene symbol: POGZ
  hgvsc: ENST00000540984.1:c.1675A>G
  hgvsp: ENSP00000443547.1:p.Ser559Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000418408
  ensembl transcript: ENST00000491586
  gene symbol: POGZ
  hgvsc: ENST00000491586.1:c.3457A>G
  hgvsp: ENSP00000418408.1:p.Ser1153Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143442
  ensembl transcript: ENST00000358476
  gene symbol: POGZ
  hgvsc: ENST00000358476.3:n.3737A>G
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000357856
  ensembl transcript: ENST00000368863
  gene symbol: POGZ
  hgvsc: ENST00000368863.2:c.3304A>G
  hgvsp: ENSP00000357856.2:p.Ser1102Gly
  variant of: http://identifiers.org/hgnc/18801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143442
  ensembl protein: ENSP00000271715
  ensembl transcript: ENST00000271715
  gene symbol: POGZ
  hgvsc: ENST00000271715.2:c.3589A>G
  hgvsp: ENSP00000271715.2:p.Ser1197Gly
  variant of: http://identifiers.org/hgnc/18801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15463
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25339
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1197Gly
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

South Asian
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allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
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SIO_000300: 1.307e1

MQRankSum
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ReadPosRankSum
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SIO_000300: 5.51e-1

ClippingRankSum
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VQSLOD
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MQ
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SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 2.443e0

DP
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SIO_000300: 1.892453e6

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

FS
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
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African
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allele frequency: 0.0e0
allele num: 10406
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8654
num of homozygotes: 0

QD
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VQSLOD
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FS
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ClippingRankSum
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DP
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.65e-2

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 6.32e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
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ClippingRankSum
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FS
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SIO_000300: 1.695e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.891835e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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DP
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FS
type: SiteQuality
SIO_000300: 4.94e-1

ClippingRankSum
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SIO_000300: -1.134e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
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East Asian
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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African
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South Asian
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allele frequency: 6.056201550387597e-5
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InbreedingCoeff
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DP
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66718
num of homozygotes: 0

South Asian
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Other
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InbreedingCoeff
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FS
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DP
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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East Asian
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Latino
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QD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Other
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ClippingRankSum
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VQSLOD
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MQ
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DP
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BaseQRankSum
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QD
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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allele num: 11578
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66718
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Other
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East Asian
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DP
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ClippingRankSum
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Latino
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MQ
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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FS
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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Other
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African
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European (Non-Finnish)
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East Asian
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InbreedingCoeff
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QD
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FS
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VQSLOD
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DP
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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East Asian
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African
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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DP
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FS
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QD
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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FS
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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FS
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QD
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10404
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

MQRankSum
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SIO_000300: 7.62e-1

ClippingRankSum
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MQ
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FS
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -3.0e-4

DP
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ReadPosRankSum
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SIO_000300: 1.06e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 2.102e0

InbreedingCoeff
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QD
type: SiteQuality
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MQ
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16512
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
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SIO_000300: 1.994e0

MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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East Asian
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African
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ClippingRankSum
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QD
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele num: 66732
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European (Finnish)
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East Asian
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African
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Latino
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Other
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South Asian
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allele num: 16512
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DP
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.574612403100775e-3
allele num: 16512
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Latino
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Other
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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FS
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele frequency: 2.996793431028799e-5
allele num: 66738
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Latino
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South Asian
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European (Finnish)
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -4.044e0

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.028e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

QD
type: SiteQuality
SIO_000300: 1.058e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993766482857828e-5
allele num: 66736
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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MQRankSum
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SIO_000300: -1.03e-1

FS
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SIO_000300: 2.088e0

VQSLOD
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ClippingRankSum
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SIO_000300: -5.76e-1

BaseQRankSum
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DP
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SIO_000300: 1.893068e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
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East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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DP
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QD
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InbreedingCoeff
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SIO_000300: -3.0e-4

BaseQRankSum
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SIO_000300: -2.083e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 1.892952e6

InbreedingCoeff
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SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.267e0

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.711e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.584e0

QD
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SIO_000300: 1.536e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.396e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.892844e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -6.824e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

East Asian
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allele num: 8654
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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allele num: 6614
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
type: SiteQuality
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DP
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8654
num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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Other
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South Asian
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allele frequency: 0.0e0
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African
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European (Finnish)
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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Other
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European (Non-Finnish)
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allele num: 66734
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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VQSLOD
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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African
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Non-Finnish)
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Other
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South Asian
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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African
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East Asian
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Latino
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South Asian
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ClippingRankSum
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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Other
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East Asian
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European (Finnish)
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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East Asian
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South Asian
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ReadPosRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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Latino
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

African
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -1.768e0

ReadPosRankSum
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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SIO_000300: 5.987e1

ClippingRankSum
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SIO_000300: -8.94e-1

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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MQ
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SIO_000300: 5.934e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
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MQRankSum
type: SiteQuality
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

QD
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 6.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.064e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
type: Population
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QD
type: SiteQuality
SIO_000300: 1.678e1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.88838e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

African
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Other
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East Asian
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ReadPosRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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DP
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FS
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66686
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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Other
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African
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European (Finnish)
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MQ
type: SiteQuality
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FS
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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DP
type: SiteQuality
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

InbreedingCoeff
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SIO_000300: 1.88e-2

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.882107e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.91e-1

ClippingRankSum
type: SiteQuality
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

MQRankSum
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QD
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SIO_000300: 1.067e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002371873780286e-5
allele num: 66614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

QD
type: SiteQuality
SIO_000300: 1.325e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 1.878392e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.74e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.822e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
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Other
type: Population
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East Asian
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allele count: 5
allele frequency: 5.780346820809249e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.878298e6

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.088650754992694e-5
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Other
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MQRankSum
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SIO_000300: -1.32e-1

DP
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InbreedingCoeff
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FS
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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European (Finnish)
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East Asian
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Other
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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VQSLOD
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DP
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10406
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Other
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South Asian
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Latino
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European (Finnish)
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66602
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Other
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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QD
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.879315e6

BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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African
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South Asian
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Other
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East Asian
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66652
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East Asian
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South Asian
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Other
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Latino
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African
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

European (Non-Finnish)
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allele frequency: 1.19994000299985e-4
allele num: 66670
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East Asian
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African
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Latino
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Other
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European (Finnish)
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South Asian
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FS
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.893025e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 766
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 8958
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 647
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2070
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3383
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 2189
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 575
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1230
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 81
allele frequency: 1.235924196649272e-3
allele num: 65538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 42
allele frequency: 4.216020879341498e-3
allele num: 9962
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 18
allele frequency: 2.790697674418605e-3
allele num: 6450
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.663e2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.275e0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

FS
type: SiteQuality
SIO_000300: 1.85611e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.386e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

QD
type: SiteQuality
SIO_000300: 8.0e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

DP
type: SiteQuality
SIO_000300: 1.952405e6

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.277e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

DP
type: SiteQuality
SIO_000300: 1.882516e6

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.249e0

GenotypeQuality
all individuals: 9205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.114e-1

FS
type: SiteQuality
SIO_000300: 2.937e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 1.883313e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 1.429e1