2-202546275-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546275
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546275
    reference: chr 2
allele count: 1
allele frequency: 8.480181815098116e-6
allele num: 117922
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.676A>G
  hgvsp: ENSP00000387278.3:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.689A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.544A>G
  hgvsp: ENSP00000380095.3:p.Thr182Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.676A>G
  hgvsp: ENSP00000416781.2:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.676A>G
  hgvsp: ENSP00000353047.5:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.676A>G
  hgvsp: ENSP00000406160.2:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.715A>G
  hgvsp: ENSP00000386580.3:p.Thr239Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.676A>G
  hgvsp: ENSP00000319363.7:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.658A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.595A>G
  hgvsp: ENSP00000387293.1:p.Thr199Ala
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr226Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

2-202546280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546280
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546280
    reference: chr 2
allele count: 18
allele frequency: 1.535181236673774e-4
allele num: 117250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.590G>A
  hgvsp: ENSP00000387293.1:p.Arg197Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.539G>A
  hgvsp: ENSP00000380095.3:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.710G>A
  hgvsp: ENSP00000386580.3:p.Arg237Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.671G>A
  hgvsp: ENSP00000416781.2:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.671G>A
  hgvsp: ENSP00000387278.3:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.684G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.671G>A
  hgvsp: ENSP00000319363.7:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.653G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.671G>A
  hgvsp: ENSP00000353047.5:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.671G>A
  hgvsp: ENSP00000406160.2:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28656
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg224Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD

2-202546281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546281
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546281
    reference: chr 2
allele count: 2
allele frequency: 1.706047939947113e-5
allele num: 117230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.709C>T
  hgvsp: ENSP00000386580.3:p.Arg237Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.670C>T
  hgvsp: ENSP00000353047.5:p.Arg224Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.589C>T
  hgvsp: ENSP00000387293.1:p.Arg197Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.683C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.670C>T
  hgvsp: ENSP00000319363.7:p.Arg224Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.670C>T
  hgvsp: ENSP00000387278.3:p.Arg224Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.670C>T
  hgvsp: ENSP00000416781.2:p.Arg224Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.652C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.538C>T
  hgvsp: ENSP00000380095.3:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.670C>T
  hgvsp: ENSP00000406160.2:p.Arg224Ter
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg224Ter
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202546282-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546282
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546282
    reference: chr 2
allele count: 1
allele frequency: 8.537522410996328e-6
allele num: 117130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.537T>G
  hgvsp: ENST00000396886.3:c.537T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.588T>G
  hgvsp: ENST00000409143.1:c.588T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.651T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.669T>G
  hgvsp: ENST00000409474.3:c.669T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.669T>G
  hgvsp: ENST00000359962.5:c.669T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.669T>G
  hgvsp: ENST00000315506.7:c.669T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.669T>G
  hgvsp: ENST00000428900.2:c.669T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.708T>G
  hgvsp: ENST00000409818.3:c.708T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.669T>G
  hgvsp: ENST00000447335.2:c.669T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.682T>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser223Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/2-202546286-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546286
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546286
    reference: chr 2
allele count: 1
allele frequency: 8.591951060246761e-6
allele num: 116388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.704T>G
  hgvsp: ENSP00000386580.3:p.Met235Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.647T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.665T>G
  hgvsp: ENSP00000406160.2:p.Met222Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.533T>G
  hgvsp: ENSP00000380095.3:p.Met178Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.665T>G
  hgvsp: ENSP00000387278.3:p.Met222Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.665T>G
  hgvsp: ENSP00000353047.5:p.Met222Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.665T>G
  hgvsp: ENSP00000416781.2:p.Met222Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.665T>G
  hgvsp: ENSP00000319363.7:p.Met222Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.584T>G
  hgvsp: ENSP00000387293.1:p.Met195Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.678T>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met222Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-202546286-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546286
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546286
    reference: chr 2
allele count: 4
allele frequency: 3.436780424098704e-5
allele num: 116388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.665T>C
  hgvsp: ENSP00000319363.7:p.Met222Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.665T>C
  hgvsp: ENSP00000406160.2:p.Met222Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.665T>C
  hgvsp: ENSP00000387278.3:p.Met222Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.665T>C
  hgvsp: ENSP00000416781.2:p.Met222Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.533T>C
  hgvsp: ENSP00000380095.3:p.Met178Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.647T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.678T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.665T>C
  hgvsp: ENSP00000353047.5:p.Met222Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.704T>C
  hgvsp: ENSP00000386580.3:p.Met235Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.584T>C
  hgvsp: ENSP00000387293.1:p.Met195Thr
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met222Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

2-202546288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546288
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546288
    reference: chr 2
allele count: 1
allele frequency: 8.607629803057431e-6
allele num: 116176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.663C>T
  hgvsp: ENST00000315506.7:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.663C>T
  hgvsp: ENST00000447335.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.676C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.645C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.582C>T
  hgvsp: ENST00000409143.1:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.702C>T
  hgvsp: ENST00000409818.3:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.531C>T
  hgvsp: ENST00000396886.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.663C>T
  hgvsp: ENST00000359962.5:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.663C>T
  hgvsp: ENST00000428900.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.663C>T
  hgvsp: ENST00000409474.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.663C>T
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-202546294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546294
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546294
    reference: chr 2
allele count: 1
allele frequency: 8.723872003349968e-6
allele num: 114628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-4C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-4C>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7067
  bin: 9.75e1
  variant carriers: 1
hgvs: c.661-4C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

2-202546296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546296
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546296
    reference: chr 2
allele count: 4
allele frequency: 3.487601576395912e-5
allele num: 114692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-6T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-6T>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22909
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 0
hgvs: c.661-6T>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

2-202546311-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546311
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546311
    reference: chr 2
allele count: 1
allele frequency: 8.907098957869422e-6
allele num: 112270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-21T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-21T>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

2-202546313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546313
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546313
    reference: chr 2
allele count: 2
allele frequency: 1.785841845846132e-5
allele num: 111992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-23C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-23C>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

2-202546318-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546318
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546318
    reference: chr 2
allele count: 1
allele frequency: 8.994747067712457e-6
allele num: 111176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-28T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-28T>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10561
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14963
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202546330-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546330
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546330
    reference: chr 2
allele count: 1
allele frequency: 9.216759755940201e-6
allele num: 108498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-40G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-40G>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

2-202546333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546333
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546333
    reference: chr 2
allele count: 1
allele frequency: 9.275061215404021e-6
allele num: 107816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-43C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-43C>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-202546337-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202546337
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202546337
    reference: chr 2
allele count: 2
allele frequency: 1.889430525639572e-5
allele num: 105852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.674-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.700-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.661-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.643-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.661-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.580-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.661-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.529-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.661-47C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.661-47C>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15672
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13922
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

2-202547519-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547519
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547519
    reference: chr 2
allele count: 1
allele frequency: 8.323068215867098e-6
allele num: 120148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+35G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+35G>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

2-202547528-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547528
    reference: chr 2
allele count: 10630
allele frequency: 8.835948929378906e-2
allele num: 120304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+26T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+26T>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 6.25e1
  variant carriers: 894
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.25e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.75e1
  variant carriers: 793
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 4.75e1
  variant carriers: 944
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.75e1
  variant carriers: 413
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 7.25e1
  variant carriers: 565
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 2.75e1
  variant carriers: 434
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 6.75e1
  variant carriers: 699
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 3.25e1
  variant carriers: 631
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 4.25e1
  variant carriers: 860
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 1026
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 5.75e1
  variant carriers: 1020
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 606
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.75e1
  variant carriers: 220
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 8.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 694
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-202547530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547530
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547530
    reference: chr 2
allele count: 1
allele frequency: 8.30813199960121e-6
allele num: 120364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+24G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+24G>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-202547534-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547534
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547534
    reference: chr 2
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+20T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+20T>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27105
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

2-202547535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547535
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547535
    reference: chr 2
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+19T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+19T>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

2-202547536-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547536
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547536
    reference: chr 2
allele count: 1
allele frequency: 8.303303053954863e-6
allele num: 120434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+18C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+18C>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

2-202547544-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547544
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547544
    reference: chr 2
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+10C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+10C>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4816
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-202547546-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547546
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547546
    reference: chr 2
allele count: 1
allele frequency: 8.298066550493736e-6
allele num: 120510
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.660+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.660+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.660+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.699+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.673+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.660+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.642+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.579+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.660+8T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.528+8T>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
hgvs: c.660+8T>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-202547557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547557
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547557
    reference: chr 2
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.657T>C
  hgvsp: ENST00000409474.3:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.657T>C
  hgvsp: ENST00000315506.7:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.696T>C
  hgvsp: ENST00000409818.3:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.639T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.576T>C
  hgvsp: ENST00000409143.1:c.576T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.657T>C
  hgvsp: ENST00000428900.2:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.525T>C
  hgvsp: ENST00000396886.3:c.525T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.670T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.657T>C
  hgvsp: ENST00000359962.5:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.657T>C
  hgvsp: ENST00000447335.2:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile219Ile
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/2-202547567-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547567
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547567
    reference: chr 2
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.686T>G
  hgvsp: ENSP00000386580.3:p.Val229Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.660T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.629T>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.647T>G
  hgvsp: ENSP00000319363.7:p.Val216Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.515T>G
  hgvsp: ENSP00000380095.3:p.Val172Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.647T>G
  hgvsp: ENSP00000387278.3:p.Val216Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.566T>G
  hgvsp: ENSP00000387293.1:p.Val189Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.647T>G
  hgvsp: ENSP00000416781.2:p.Val216Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.647T>G
  hgvsp: ENSP00000406160.2:p.Val216Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.647T>G
  hgvsp: ENSP00000353047.5:p.Val216Gly
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val216Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-202547570-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547570
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547570
    reference: chr 2
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.644A>G
  hgvsp: ENSP00000319363.7:p.Gln215Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.644A>G
  hgvsp: ENSP00000353047.5:p.Gln215Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.563A>G
  hgvsp: ENSP00000387293.1:p.Gln188Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.683A>G
  hgvsp: ENSP00000386580.3:p.Gln228Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.644A>G
  hgvsp: ENSP00000416781.2:p.Gln215Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.644A>G
  hgvsp: ENSP00000406160.2:p.Gln215Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.512A>G
  hgvsp: ENSP00000380095.3:p.Gln171Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.626A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.644A>G
  hgvsp: ENSP00000387278.3:p.Gln215Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.657A>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln215Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

2-202547572-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547572
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547572
    reference: chr 2
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.655A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.642A>G
  hgvsp: ENST00000409474.3:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.510A>G
  hgvsp: ENST00000396886.3:c.510A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.642A>G
  hgvsp: ENST00000359962.5:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.642A>G
  hgvsp: ENST00000315506.7:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.681A>G
  hgvsp: ENST00000409818.3:c.681A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.642A>G
  hgvsp: ENST00000447335.2:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.642A>G
  hgvsp: ENST00000428900.2:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.561A>G
  hgvsp: ENST00000409143.1:c.561A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.624A>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu214Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

2-202547579-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547579
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547579
    reference: chr 2
allele count: 3
allele frequency: 2.487850994311114e-5
allele num: 120586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.635A>C
  hgvsp: ENSP00000319363.7:p.Asp212Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.635A>C
  hgvsp: ENSP00000406160.2:p.Asp212Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.648A>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.674A>C
  hgvsp: ENSP00000386580.3:p.Asp225Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.503A>C
  hgvsp: ENSP00000380095.3:p.Asp168Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.554A>C
  hgvsp: ENSP00000387293.1:p.Asp185Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.635A>C
  hgvsp: ENSP00000387278.3:p.Asp212Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.635A>C
  hgvsp: ENSP00000353047.5:p.Asp212Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.635A>C
  hgvsp: ENSP00000416781.2:p.Asp212Ala
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.617A>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp212Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

2-202547586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547586
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547586
    reference: chr 2
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.628G>A
  hgvsp: ENSP00000406160.2:p.Gly210Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.628G>A
  hgvsp: ENSP00000353047.5:p.Gly210Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.547G>A
  hgvsp: ENSP00000387293.1:p.Gly183Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.641G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.667G>A
  hgvsp: ENSP00000386580.3:p.Gly223Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.610G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.496G>A
  hgvsp: ENSP00000380095.3:p.Gly166Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.628G>A
  hgvsp: ENSP00000416781.2:p.Gly210Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.628G>A
  hgvsp: ENSP00000319363.7:p.Gly210Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.628G>A
  hgvsp: ENSP00000387278.3:p.Gly210Arg
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly210Arg
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

2-202547587-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547587
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547587
    reference: chr 2
allele count: 3
allele frequency: 2.487727212418734e-5
allele num: 120592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.627G>A
  hgvsp: ENST00000428900.2:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.609G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.666G>A
  hgvsp: ENST00000409818.3:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.627G>A
  hgvsp: ENST00000447335.2:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.627G>A
  hgvsp: ENST00000359962.5:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.640G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.495G>A
  hgvsp: ENST00000396886.3:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.546G>A
  hgvsp: ENST00000409143.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.627G>A
  hgvsp: ENST00000315506.7:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.627G>A
  hgvsp: ENST00000409474.3:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu209Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

2-202547592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547592
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547592
    reference: chr 2
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.661G>A
  hgvsp: ENSP00000386580.3:p.Val221Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.622G>A
  hgvsp: ENSP00000416781.2:p.Val208Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.604G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.541G>A
  hgvsp: ENSP00000387293.1:p.Val181Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.622G>A
  hgvsp: ENSP00000319363.7:p.Val208Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.622G>A
  hgvsp: ENSP00000406160.2:p.Val208Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.622G>A
  hgvsp: ENSP00000353047.5:p.Val208Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.490G>A
  hgvsp: ENSP00000380095.3:p.Val164Ile
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.635G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.622G>A
  hgvsp: ENSP00000387278.3:p.Val208Ile
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3975
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val208Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

2-202547603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547603
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547603
    reference: chr 2
allele count: 2
allele frequency: 1.659007581664648e-5
allele num: 120554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.611A>G
  hgvsp: ENSP00000319363.7:p.Asn204Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.611A>G
  hgvsp: ENSP00000387278.3:p.Asn204Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.530A>G
  hgvsp: ENSP00000387293.1:p.Asn177Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.611A>G
  hgvsp: ENSP00000416781.2:p.Asn204Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.650A>G
  hgvsp: ENSP00000386580.3:p.Asn217Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.611A>G
  hgvsp: ENSP00000353047.5:p.Asn204Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.611A>G
  hgvsp: ENSP00000406160.2:p.Asn204Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.624A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.479A>G
  hgvsp: ENSP00000380095.3:p.Asn160Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.593A>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn204Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

2-202547611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547611
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547611
    reference: chr 2
allele count: 177
allele frequency: 1.468465329284683e-3
allele num: 120534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.522A>G
  hgvsp: ENST00000409143.1:c.522A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.471A>G
  hgvsp: ENST00000396886.3:c.471A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.642A>G
  hgvsp: ENST00000409818.3:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.603A>G
  hgvsp: ENST00000409474.3:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.585A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.603A>G
  hgvsp: ENST00000359962.5:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.603A>G
  hgvsp: ENST00000428900.2:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.603A>G
  hgvsp: ENST00000315506.7:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.616A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.603A>G
  hgvsp: ENST00000447335.2:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 4828
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val201Val
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

2-202547612-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547612
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547612
    reference: chr 2
allele count: 1
allele frequency: 8.296414289743973e-6
allele num: 120534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.602T>A
  hgvsp: ENSP00000353047.5:p.Val201Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.602T>A
  hgvsp: ENSP00000406160.2:p.Val201Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.602T>A
  hgvsp: ENSP00000319363.7:p.Val201Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.470T>A
  hgvsp: ENSP00000380095.3:p.Val157Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.602T>A
  hgvsp: ENSP00000416781.2:p.Val201Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.615T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.641T>A
  hgvsp: ENSP00000386580.3:p.Val214Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.521T>A
  hgvsp: ENSP00000387293.1:p.Val174Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.584T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.602T>A
  hgvsp: ENSP00000387278.3:p.Val201Glu
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val201Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

2-202547620-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547620
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547620
    reference: chr 2
allele count: 5
allele frequency: 4.149102134298138e-5
allele num: 120508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.576C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.633C>A
  hgvsp: ENSP00000386580.3:p.Asp211Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.594C>A
  hgvsp: ENSP00000319363.7:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.594C>A
  hgvsp: ENSP00000387278.3:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.594C>A
  hgvsp: ENSP00000353047.5:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.607C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.462C>A
  hgvsp: ENSP00000380095.3:p.Asp154Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.594C>A
  hgvsp: ENSP00000416781.2:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.594C>A
  hgvsp: ENSP00000406160.2:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.513C>A
  hgvsp: ENSP00000387293.1:p.Asp171Glu
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp198Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

2-202547632-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547632
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547632
    reference: chr 2
allele count: 97
allele frequency: 8.053535252897612e-4
allele num: 120444
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.564A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.582A>G
  hgvsp: ENST00000447335.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.621A>G
  hgvsp: ENST00000409818.3:c.621A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.501A>G
  hgvsp: ENST00000409143.1:c.501A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.582A>G
  hgvsp: ENST00000409474.3:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.595A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.582A>G
  hgvsp: ENST00000315506.7:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.582A>G
  hgvsp: ENST00000359962.5:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.450A>G
  hgvsp: ENST00000396886.3:c.450A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.582A>G
  hgvsp: ENST00000428900.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu194Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202547635-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547635
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547635
    reference: chr 2
allele count: 2
allele frequency: 1.660908849322349e-5
allele num: 120416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.579G>T
  hgvsp: ENSP00000353047.5:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.579G>T
  hgvsp: ENSP00000319363.7:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.498G>T
  hgvsp: ENSP00000387293.1:p.Leu166Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.579G>T
  hgvsp: ENSP00000406160.2:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.447G>T
  hgvsp: ENSP00000380095.3:p.Leu149Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.561G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.579G>T
  hgvsp: ENSP00000387278.3:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.618G>T
  hgvsp: ENSP00000386580.3:p.Leu206Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.592G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.579G>T
  hgvsp: ENSP00000416781.2:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10532
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu193Phe
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

2-202547643-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547643
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547643
    reference: chr 2
allele count: 7
allele frequency: 5.815789036406839e-5
allele num: 120362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.557-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.575-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.575-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.614-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.575-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.443-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.588-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.575-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.494-4C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.575-4C>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: c.575-4C>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202547655-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547655
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547654
    reference: chr 2
allele count: 4
allele frequency: 3.326126725428239e-5
allele num: 120260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.575-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.443-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.575-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.575-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.557-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.575-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.494-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.614-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.588-17delT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.575-17delT
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10070
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: CA
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202547662-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547662
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547662
    reference: chr 2
allele count: 36
allele frequency: 2.994559882879436e-4
allele num: 120218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.575-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.588-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.614-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.575-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.575-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.575-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.443-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.575-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.557-23G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.494-23G>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9372
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-202547670-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547670
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547670
    reference: chr 2
allele count: 299
allele frequency: 2.488307451606997e-3
allele num: 120162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.494-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.575-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.588-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.575-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.614-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.575-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.443-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.557-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.575-31C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.575-31C>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 9159
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9963
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 4
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

2-202547686-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202547686
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202547687
    reference: chr 2
allele count: 5
allele frequency: 4.166736112268538e-5
allele num: 119998
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.575-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.575-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.588-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.494-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.614-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.557-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.443-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.575-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.575-48dupA
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.575-48dupA
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8969
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27100
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

2-202549744-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549744
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549744
    reference: chr 2
allele count: 7
allele frequency: 8.4227751840978e-5
allele num: 83108
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+43G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+43G>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16079
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18713
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8033
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

2-202549760-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549760
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549760
    reference: chr 2
allele count: 2
allele frequency: 2.340823970037453e-5
allele num: 85440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+27G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+27G>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16634
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-202549765-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549765
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549765
    reference: chr 2
allele count: 1
allele frequency: 1.147183664104623e-5
allele num: 87170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+22T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+22T>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18907
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

2-202549770-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549770
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549770
    reference: chr 2
allele count: 1
allele frequency: 1.12620222087078e-5
allele num: 88794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+17G>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+17G>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5241
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

2-202549772-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549772
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549772
    reference: chr 2
allele count: 1
allele frequency: 1.109188517680465e-5
allele num: 90156
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+15C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+15C>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4802
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/2-202549773-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549773
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549773
    reference: chr 2
allele count: 1
allele frequency: 1.103314356326405e-5
allele num: 90636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+14G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+14G>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20418
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

2-202549781-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549781
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549781
    reference: chr 2
allele count: 3
allele frequency: 3.185254395651066e-5
allele num: 94184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+6C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+6C>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8849
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
hgvs: c.574+6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

2-202549781-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549781
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549781
    reference: chr 2
allele count: 25
allele frequency: 2.654378663042555e-4
allele num: 94184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.493+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.587+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.574+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.574+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.574+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.442+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.574+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.574+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.613+6C>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.556+6C>A
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24157
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8849
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 0
hgvs: c.574+6C>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

2-202549788-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549788
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549788
    reference: chr 2
allele count: 1
allele frequency: 1.042491972811809e-5
allele num: 95924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.555T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.612T>A
  hgvsp: ENSP00000386580.3:p.Ser204Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.586T>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.573T>A
  hgvsp: ENSP00000319363.7:p.Ser191Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.573T>A
  hgvsp: ENSP00000353047.5:p.Ser191Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.441T>A
  hgvsp: ENSP00000380095.3:p.Ser147Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.573T>A
  hgvsp: ENSP00000416781.2:p.Ser191Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.573T>A
  hgvsp: ENSP00000387278.3:p.Ser191Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.573T>A
  hgvsp: ENSP00000406160.2:p.Ser191Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.492T>A
  hgvsp: ENSP00000387293.1:p.Ser164Arg
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser191Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-202549789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549789
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549789
    reference: chr 2
allele count: 2
allele frequency: 2.079737121227877e-5
allele num: 96166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.440G>A
  hgvsp: ENSP00000380095.3:p.Ser147Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.572G>A
  hgvsp: ENSP00000319363.7:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.491G>A
  hgvsp: ENSP00000387293.1:p.Ser164Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.611G>A
  hgvsp: ENSP00000386580.3:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.585G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.572G>A
  hgvsp: ENSP00000387278.3:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.572G>A
  hgvsp: ENSP00000416781.2:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.554G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.572G>A
  hgvsp: ENSP00000353047.5:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.572G>A
  hgvsp: ENSP00000406160.2:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25459
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser191Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

2-202549794-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549794
    reference: chr 2
allele count: 1
allele frequency: 1.029738858225554e-5
allele num: 97112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.567G>A
  hgvsp: ENST00000315506.7:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.580G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.567G>A
  hgvsp: ENST00000447335.2:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.486G>A
  hgvsp: ENST00000409143.1:c.486G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.549G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.606G>A
  hgvsp: ENST00000409818.3:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.435G>A
  hgvsp: ENST00000396886.3:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.567G>A
  hgvsp: ENST00000428900.2:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.567G>A
  hgvsp: ENST00000409474.3:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.567G>A
  hgvsp: ENST00000359962.5:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu189Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-202549797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549797
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549797
    reference: chr 2
allele count: 5
allele frequency: 5.108713421611901e-5
allele num: 97872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.577G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.603G>A
  hgvsp: ENST00000409818.3:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.483G>A
  hgvsp: ENST00000409143.1:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.564G>A
  hgvsp: ENST00000409474.3:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.546G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.564G>A
  hgvsp: ENST00000359962.5:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.564G>A
  hgvsp: ENST00000428900.2:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.564G>A
  hgvsp: ENST00000315506.7:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.432G>A
  hgvsp: ENST00000396886.3:c.432G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.564G>A
  hgvsp: ENST00000447335.2:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27130
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala188Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

2-202549798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549798
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549798
    reference: chr 2
allele count: 4
allele frequency: 4.075810067250866e-5
allele num: 98140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.431C>T
  hgvsp: ENSP00000380095.3:p.Ala144Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.602C>T
  hgvsp: ENSP00000386580.3:p.Ala201Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.482C>T
  hgvsp: ENSP00000387293.1:p.Ala161Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.563C>T
  hgvsp: ENSP00000406160.2:p.Ala188Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.563C>T
  hgvsp: ENSP00000353047.5:p.Ala188Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.563C>T
  hgvsp: ENSP00000416781.2:p.Ala188Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.563C>T
  hgvsp: ENSP00000319363.7:p.Ala188Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.576C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.563C>T
  hgvsp: ENSP00000387278.3:p.Ala188Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.545C>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27323
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala188Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

2-202549809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549809
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549809
    reference: chr 2
allele count: 10
allele frequency: 9.882790109303658e-5
allele num: 101186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.552C>T
  hgvsp: ENST00000428900.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.552C>T
  hgvsp: ENST00000447335.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.420C>T
  hgvsp: ENST00000396886.3:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.552C>T
  hgvsp: ENST00000359962.5:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.591C>T
  hgvsp: ENST00000409818.3:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.552C>T
  hgvsp: ENST00000409474.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.552C>T
  hgvsp: ENST00000315506.7:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.565C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.534C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.471C>T
  hgvsp: ENST00000409143.1:c.471C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29345
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His184His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

2-202549812-GATGAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549812
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549807
    reference: chr 2
allele count: 1
allele frequency: 9.845426799251748e-6
allele num: 101570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.526_530delATCAT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.544_548delATCAT
  hgvsp: ENSP00000353047.5:p.Ile182ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.412_416delATCAT
  hgvsp: ENSP00000380095.3:p.Ile138ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.463_467delATCAT
  hgvsp: ENSP00000387293.1:p.Ile155ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.557_561delATCAT
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.544_548delATCAT
  hgvsp: ENSP00000319363.7:p.Ile182ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.583_587delATCAT
  hgvsp: ENSP00000386580.3:p.Ile195ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.544_548delATCAT
  hgvsp: ENSP00000387278.3:p.Ile182ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.544_548delATCAT
  hgvsp: ENSP00000406160.2:p.Ile182ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.544_548delATCAT
  hgvsp: ENSP00000416781.2:p.Ile182ProfsTer26
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29586
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile182ProfsTer26
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: GATGAT
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

2-202549817-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549817
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549817
    reference: chr 2
allele count: 1
allele frequency: 9.807767752059631e-6
allele num: 101960
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.544A>G
  hgvsp: ENSP00000387278.3:p.Ile182Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.463A>G
  hgvsp: ENSP00000387293.1:p.Ile155Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.544A>G
  hgvsp: ENSP00000406160.2:p.Ile182Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.412A>G
  hgvsp: ENSP00000380095.3:p.Ile138Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.544A>G
  hgvsp: ENSP00000319363.7:p.Ile182Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.583A>G
  hgvsp: ENSP00000386580.3:p.Ile195Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.526A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.557A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.544A>G
  hgvsp: ENSP00000353047.5:p.Ile182Val
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.544A>G
  hgvsp: ENSP00000416781.2:p.Ile182Val
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile182Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-202549823-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549823
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549823
    reference: chr 2
allele count: 17
allele frequency: 1.6998300169983e-4
allele num: 100010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.538G>T
  hgvsp: ENSP00000416781.2:p.Ala180Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.551G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.538G>T
  hgvsp: ENSP00000353047.5:p.Ala180Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.538G>T
  hgvsp: ENSP00000319363.7:p.Ala180Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.520G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.538G>T
  hgvsp: ENSP00000406160.2:p.Ala180Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.406G>T
  hgvsp: ENSP00000380095.3:p.Ala136Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.457G>T
  hgvsp: ENSP00000387293.1:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.577G>T
  hgvsp: ENSP00000386580.3:p.Ala193Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.538G>T
  hgvsp: ENSP00000387278.3:p.Ala180Ser
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27711
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 2.75e1
  variant carriers: 2
hgvs: p.Ala180Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-202549827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549827
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549827
    reference: chr 2
allele count: 1
allele frequency: 9.824533825869962e-6
allele num: 101786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.453G>T
  hgvsp: ENSP00000387293.1:p.Leu151Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.534G>T
  hgvsp: ENSP00000353047.5:p.Leu178Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.573G>T
  hgvsp: ENSP00000386580.3:p.Leu191Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.534G>T
  hgvsp: ENSP00000387278.3:p.Leu178Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.534G>T
  hgvsp: ENSP00000416781.2:p.Leu178Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.534G>T
  hgvsp: ENSP00000319363.7:p.Leu178Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.547G>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.402G>T
  hgvsp: ENSP00000380095.3:p.Leu134Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.534G>T
  hgvsp: ENSP00000406160.2:p.Leu178Phe
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.516G>T
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu178Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

2-202549831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549831
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549831
    reference: chr 2
allele count: 1
allele frequency: 9.866992935233059e-6
allele num: 101348
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.530T>C
  hgvsp: ENSP00000387278.3:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.530T>C
  hgvsp: ENSP00000319363.7:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.530T>C
  hgvsp: ENSP00000353047.5:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.398T>C
  hgvsp: ENSP00000380095.3:p.Ile133Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.543T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.530T>C
  hgvsp: ENSP00000416781.2:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.569T>C
  hgvsp: ENSP00000386580.3:p.Ile190Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.512T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.449T>C
  hgvsp: ENSP00000387293.1:p.Ile150Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.530T>C
  hgvsp: ENSP00000406160.2:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile177Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

2-202549835-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549835
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549835
    reference: chr 2
allele count: 1
allele frequency: 9.993204620857817e-6
allele num: 100068
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.526G>A
  hgvsp: ENSP00000387278.3:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.445G>A
  hgvsp: ENSP00000387293.1:p.Asp149Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.526G>A
  hgvsp: ENSP00000406160.2:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.394G>A
  hgvsp: ENSP00000380095.3:p.Asp132Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.539G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.526G>A
  hgvsp: ENSP00000319363.7:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.526G>A
  hgvsp: ENSP00000416781.2:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.526G>A
  hgvsp: ENSP00000353047.5:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.508G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.565G>A
  hgvsp: ENSP00000386580.3:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25669
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp176Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

2-202549837-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549837
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549835
    reference: chr 2
allele count: 1
allele frequency: 1.008959560900799e-5
allele num: 99112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.522_523delAG
  hgvsp: ENSP00000353047.5:p.Asp176HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.561_562delAG
  hgvsp: ENSP00000386580.3:p.Asp189HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.441_442delAG
  hgvsp: ENSP00000387293.1:p.Asp149HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.522_523delAG
  hgvsp: ENSP00000319363.7:p.Asp176HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.504_505delAG
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.390_391delAG
  hgvsp: ENSP00000380095.3:p.Asp132HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.522_523delAG
  hgvsp: ENSP00000406160.2:p.Asp176HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.522_523delAG
  hgvsp: ENSP00000416781.2:p.Asp176HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.522_523delAG
  hgvsp: ENSP00000387278.3:p.Asp176HisfsTer33
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.535_536delAG
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp176HisfsTer33
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: CCT
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-202549840-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549840
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549840
    reference: chr 2
allele count: 3
allele frequency: 3.058478101296795e-5
allele num: 98088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.560C>G
  hgvsp: ENSP00000386580.3:p.Thr187Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.521C>G
  hgvsp: ENSP00000319363.7:p.Thr174Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.534C>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.521C>G
  hgvsp: ENSP00000406160.2:p.Thr174Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.440C>G
  hgvsp: ENSP00000387293.1:p.Thr147Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.521C>G
  hgvsp: ENSP00000353047.5:p.Thr174Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.521C>G
  hgvsp: ENSP00000387278.3:p.Thr174Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.389C>G
  hgvsp: ENSP00000380095.3:p.Thr130Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.521C>G
  hgvsp: ENSP00000416781.2:p.Thr174Arg
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.503C>G
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr174Arg
num of homozygotes: 1
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-202549841-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549841
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549841
    reference: chr 2
allele count: 6
allele frequency: 6.112967642024615e-5
allele num: 98152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.520A>T
  hgvsp: ENSP00000406160.2:p.Thr174Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.559A>T
  hgvsp: ENSP00000386580.3:p.Thr187Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.520A>T
  hgvsp: ENSP00000353047.5:p.Thr174Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.520A>T
  hgvsp: ENSP00000387278.3:p.Thr174Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.388A>T
  hgvsp: ENSP00000380095.3:p.Thr130Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.520A>T
  hgvsp: ENSP00000319363.7:p.Thr174Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.520A>T
  hgvsp: ENSP00000416781.2:p.Thr174Ser
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.533A>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.502A>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.439A>T
  hgvsp: ENSP00000387293.1:p.Thr147Ser
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23455
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr174Ser
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-202549843-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549843
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549843
    reference: chr 2
allele count: 1
allele frequency: 1.025872504565133e-5
allele num: 97478
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.518T>C
  hgvsp: ENSP00000416781.2:p.Met173Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.557T>C
  hgvsp: ENSP00000386580.3:p.Met186Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.437T>C
  hgvsp: ENSP00000387293.1:p.Met146Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.518T>C
  hgvsp: ENSP00000319363.7:p.Met173Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.518T>C
  hgvsp: ENSP00000387278.3:p.Met173Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.531T>C
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.518T>C
  hgvsp: ENSP00000353047.5:p.Met173Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.386T>C
  hgvsp: ENSP00000380095.3:p.Met129Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.518T>C
  hgvsp: ENSP00000406160.2:p.Met173Thr
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.500T>C
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9834
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met173Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

2-202549846-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549846
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549846
    reference: chr 2
allele count: 1
allele frequency: 1.036033235946209e-5
allele num: 96522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.515A>G
  hgvsp: ENSP00000319363.7:p.Glu172Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.528A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.434A>G
  hgvsp: ENSP00000387293.1:p.Glu145Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.515A>G
  hgvsp: ENSP00000416781.2:p.Glu172Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.554A>G
  hgvsp: ENSP00000386580.3:p.Glu185Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.515A>G
  hgvsp: ENSP00000387278.3:p.Glu172Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.515A>G
  hgvsp: ENSP00000353047.5:p.Glu172Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.383A>G
  hgvsp: ENSP00000380095.3:p.Glu128Gly
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.497A>G
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.515A>G
  hgvsp: ENSP00000406160.2:p.Glu172Gly
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22145
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu172Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum

2-202549847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549847
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549847
    reference: chr 2
allele count: 1
allele frequency: 1.038011999418713e-5
allele num: 96338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.514G>A
  hgvsp: ENSP00000387278.3:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.553G>A
  hgvsp: ENSP00000386580.3:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.514G>A
  hgvsp: ENSP00000353047.5:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.527G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.496G>A
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.514G>A
  hgvsp: ENSP00000416781.2:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.514G>A
  hgvsp: ENSP00000406160.2:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.514G>A
  hgvsp: ENSP00000319363.7:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.382G>A
  hgvsp: ENSP00000380095.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.433G>A
  hgvsp: ENSP00000387293.1:p.Glu145Lys
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu172Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

2-202549848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549848
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202549848
    reference: chr 2
allele count: 6
allele frequency: 6.246616416107942e-5
allele num: 96052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000380095
  ensembl transcript: ENST00000396886
  gene symbol: MPP4
  hgvsc: ENST00000396886.3:c.381C>T
  hgvsp: ENST00000396886.3:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000319363
  ensembl transcript: ENST00000315506
  gene symbol: MPP4
  hgvsc: ENST00000315506.7:c.513C>T
  hgvsp: ENST00000315506.7:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000486212
  gene symbol: MPP4
  hgvsc: ENST00000486212.2:n.495C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000406160
  ensembl transcript: ENST00000447335
  gene symbol: MPP4
  hgvsc: ENST00000447335.2:c.513C>T
  hgvsp: ENST00000447335.2:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000386580
  ensembl transcript: ENST00000409818
  gene symbol: MPP4
  hgvsc: ENST00000409818.3:c.552C>T
  hgvsp: ENST00000409818.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387278
  ensembl transcript: ENST00000409474
  gene symbol: MPP4
  hgvsc: ENST00000409474.3:c.513C>T
  hgvsp: ENST00000409474.3:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000387293
  ensembl transcript: ENST00000409143
  gene symbol: MPP4
  hgvsc: ENST00000409143.1:c.432C>T
  hgvsp: ENST00000409143.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000416781
  ensembl transcript: ENST00000428900
  gene symbol: MPP4
  hgvsc: ENST00000428900.2:c.513C>T
  hgvsp: ENST00000428900.2:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082126
  ensembl transcript: ENST00000483841
  gene symbol: MPP4
  hgvsc: ENST00000483841.2:n.526C>T
  variant of: http://identifiers.org/hgnc/13680
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082126
  ensembl protein: ENSP00000353047
  ensembl transcript: ENST00000359962
  gene symbol: MPP4
  hgvsc: ENST00000359962.5:c.513C>T
  hgvsp: ENST00000359962.5:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13680
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His171His
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 39036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4481
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7072
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522348069662648e-5
allele num: 65688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.731233e6

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

GenotypeQuality
all individuals: 1001
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7088
bin: 9.75e1
variant carriers: 18

African
type: Population
allele count: 2
allele frequency: 2.120890774125132e-4
allele num: 9430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.649236606186703e-5
allele num: 65366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.806451612903225e-4
allele num: 15500
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.378121284185493e-4
allele num: 8410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.720387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
all individuals: 38084
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7073
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.378686964795433e-4
allele num: 8408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65360
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.372e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.719922e6

FS
type: SiteQuality
SIO_000300: 6.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7073
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531299767242435e-5
allele num: 65304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.378e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.08e-1

DP
type: SiteQuality
SIO_000300: 1.716191e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.881e0

QD
type: SiteQuality
SIO_000300: 1.517e1

GenotypeQuality
all individuals: 35973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7074
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.06928999144568e-4
allele num: 9352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.241e1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.697686e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 4

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.620787382169922e-5
allele num: 64924
num of homozygotes: 0

Other
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allele frequency: 1.179245283018868e-3
allele num: 848
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 5.32e-1

ClippingRankSum
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InbreedingCoeff
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FS
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DP
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MQ
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.241e1

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

BaseQRankSum
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SIO_000300: 1.52e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.543305142292734e-5
allele num: 64796
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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DP
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MQRankSum
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FS
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VQSLOD
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QD
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InbreedingCoeff
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SIO_000300: 2.7e-3

MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63960
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele num: 15188
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 5.0e-4

MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.057e1

MQ
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DP
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ClippingRankSum
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SIO_000300: 2.85e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.68764648895278e-5
allele num: 63998
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.206407659731172e-5
allele num: 10862
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

FS
type: SiteQuality
SIO_000300: 6.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.337e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.64595e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9042
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14888
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.59347313404296e-5
allele num: 62756
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.63e0

QD
type: SiteQuality
SIO_000300: 1.491e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.196215680634129e-5
allele num: 62574
num of homozygotes: 0

East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
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FS
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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Latino
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Other
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MQ
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DP
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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Other
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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BaseQRankSum
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FS
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7050
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1262
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14300
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.330849081714134e-4
allele num: 7514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.505e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.643e1

DP
type: SiteQuality
SIO_000300: 1.3975e6

GenotypeQuality
all individuals: 2686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 7.5e0
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GenotypeQuality
all individuals: 564
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8788
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7304
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.081165452653486e-4
allele num: 9610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

DP
type: SiteQuality
SIO_000300: 1.389969e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.927e1

VQSLOD
type: SiteQuality
SIO_000300: -1.023e0

GenotypeQuality
all individuals: 4310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4043
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
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GenotypeQuality
all individuals: 509
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4199
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.875e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 2.274455e6

QD
type: SiteQuality
SIO_000300: 1.177e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 3582
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 230
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3408
bin: 9.25e1
variant carriers: 19

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4090
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 31427
bin: 9.75e1
variant carriers: 9834

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3683
bin: 8.25e1
variant carriers: 19

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8736
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 2306
bin: 7.25e1
variant carriers: 10

African
type: Population
allele count: 938
allele frequency: 9.642269736842106e-2
allele num: 9728
num of homozygotes: 43

Latino
type: Population
allele count: 703
allele frequency: 6.096080471730836e-2
allele num: 11532
num of homozygotes: 22

East Asian
type: Population
allele count: 1969
allele frequency: 2.295406854744696e-1
allele num: 8578
num of homozygotes: 237

European (Finnish)
type: Population
allele count: 647
allele frequency: 9.782280012095555e-2
allele num: 6614
num of homozygotes: 20

European (Non-Finnish)
type: Population
allele count: 3478
allele frequency: 5.228817126706357e-2
allele num: 66516
num of homozygotes: 98

Other
type: Population
allele count: 58
allele frequency: 6.51685393258427e-2
allele num: 890
num of homozygotes: 4

South Asian
type: Population
allele count: 2837
allele frequency: 1.725039523288338e-1
allele num: 16446
num of homozygotes: 270

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 2.474048e6

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.67e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.14e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.563e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

GenotypeQuality
all individuals: 237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9870
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.212e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.114e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.543e1

DP
type: SiteQuality
SIO_000300: 2.359436e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 4257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2632
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027326895418122e-4
allele num: 9734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.914e1

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.666e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

DP
type: SiteQuality
SIO_000300: 2.361324e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeQuality
all individuals: 4158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2628
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.361803e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.686e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026904908605463e-4
allele num: 9738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.38e-1

FS
type: SiteQuality
SIO_000300: 4.51e0

DP
type: SiteQuality
SIO_000300: 2.362029e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.93e0

QD
type: SiteQuality
SIO_000300: 2.766e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.664009703690868e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66590
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.2813e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8620
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

South Asian
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allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
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InbreedingCoeff
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QD
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MQ
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DP
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66648
num of homozygotes: 0

Other
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QD
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele num: 66654
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66660
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African
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South Asian
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European (Finnish)
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Other
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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DP
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.928e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.052e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.367034e6

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

GenotypeQuality
all individuals: 4837
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
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GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10809
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27109
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.075030750307503e-4
allele num: 9756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.057e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.889e0

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.17e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.36731e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4170
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GenotypeQuality
all individuals: 10794
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.366974e6

VQSLOD
type: SiteQuality
SIO_000300: -2.518e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.346e0

QD
type: SiteQuality
SIO_000300: 5.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10776
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 27108
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.051702913418137e-4
allele num: 9748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.366769e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.515e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 10716
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27179
bin: 9.75e1
variant carriers: 176

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.653513326410523e-4
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 165
allele frequency: 1.693697392732499e-2
allele num: 9742
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

DP
type: SiteQuality
SIO_000300: 2.379564e6

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2630
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 10747
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variant carriers: 0

GenotypeQuality
all individuals: 27109
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4841
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.367039e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e-1

FS
type: SiteQuality
SIO_000300: 6.362e0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-3

QD
type: SiteQuality
SIO_000300: 1.479e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.133e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.08071472581639e-4
allele num: 9738
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.193e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

FS
type: SiteQuality
SIO_000300: 1.194e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.743e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 2.366881e6

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 67
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 97

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 2617
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505992970650966e-5
allele num: 66578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.064806792583608e-4
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 87
allele frequency: 8.939580764488286e-3
allele num: 9732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 6.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.37008e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

QD
type: SiteQuality
SIO_000300: 1.509e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 259
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.188e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.2813e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 2.364315e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.061e0

QD
type: SiteQuality
SIO_000300: 1.133e1

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27110
bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
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variant carriers: 0

GenotypeQuality
all individuals: 10470
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.25273390036452e-4
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.818e0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 2.362765e6

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.167e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3973
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.432498175626368e-4
allele num: 16444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.017e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.358739e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

GenotypeQuality
all individuals: 9860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
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variant carriers: 0

GenotypeQuality
all individuals: 4130
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variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
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GenotypeQuality
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bin: 9.75e1
variant carriers: 35

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2595
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variant carriers: 0

GenotypeQuality
all individuals: 4686
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variant carriers: 0

GenotypeQuality
all individuals: 3968
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 36
allele frequency: 3.712105588781192e-3
allele num: 9698
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.149e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.14e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.356265e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.927e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

GenotypeQuality
all individuals: 4117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 1

GenotypeQuality
all individuals: 27243
bin: 9.75e1
variant carriers: 295

GenotypeQuality
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GenotypeQuality
all individuals: 352
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GenotypeQuality
all individuals: 3956
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variant carriers: 0

GenotypeQuality
all individuals: 4215
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 1

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 9338
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variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 286
allele frequency: 2.95332507228418e-2
allele num: 9684
num of homozygotes: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.523775129408932e-5
allele num: 66456
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.080611535788742e-4
allele num: 11512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.646e1

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 2.355136e6

GenotypeQuality
all individuals: 3966
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6928
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 50
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GenotypeQuality
all individuals: 4112
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variant carriers: 0

GenotypeQuality
all individuals: 967
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GenotypeQuality
all individuals: 2374
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GenotypeQuality
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GenotypeQuality
all individuals: 926
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 577
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 462
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GenotypeQuality
all individuals: 699
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.033912324234905e-4
allele num: 9672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740644038294169e-4
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01313727853441e-5
allele num: 66376
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.049e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

QD
type: SiteQuality
SIO_000300: 1.552e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 2.338676e6

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 617
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GenotypeQuality
all individuals: 5213
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.274581209031318e-3
allele num: 5492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.37497e5

FS
type: SiteQuality
SIO_000300: 9.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQ
type: SiteQuality
SIO_000300: 6.09e1

GenotypeQuality
all individuals: 4391
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 323
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GenotypeQuality
all individuals: 1926
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variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.67379679144385e-4
allele num: 7480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48392
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.483e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

VQSLOD
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

QD
type: SiteQuality
SIO_000300: 8.67e0

DP
type: SiteQuality
SIO_000300: 1.006681e6

GenotypeQuality
all individuals: 475
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 5.25e1
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GenotypeQuality
all individuals: 982
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5773
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.024127601003967e-5
allele num: 49404
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -9.27e-1

QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.046211e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50382
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.413627367825841e-4
allele num: 7074
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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QD
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FS
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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SIO_000300: -2.008e0

MQ
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SIO_000300: 5.727e1

BaseQRankSum
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SIO_000300: 9.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 6248
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

Latino
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allele frequency: 1.228199459592238e-4
allele num: 8142
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -2.51e-1

BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

DP
type: SiteQuality
SIO_000300: 1.101029e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5136
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.944617299315495e-5
allele num: 51424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.918e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

InbreedingCoeff
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MQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.186e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

DP
type: SiteQuality
SIO_000300: 1.110596e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53462
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.050769646232784e-4
allele num: 7406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11948
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.165459e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 2
allele frequency: 3.816793893129771e-4
allele num: 5240
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 3.179828663349669e-4
allele num: 53462
num of homozygotes: 0

African
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Latino
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allele frequency: 2.297266253158741e-4
allele num: 8706
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 3.347840642785404e-4
allele num: 11948
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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allele num: 7526
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East Asian
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MQ
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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FS
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 54556
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South Asian
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East Asian
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allele frequency: 2.875215641173088e-4
allele num: 6956
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Latino
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num of homozygotes: 0

Other
type: Population
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FS
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

DP
type: SiteQuality
SIO_000300: 1.189508e6

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 7.79e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 12975
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55084
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.31578947368421e-4
allele num: 7600
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 3.747e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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SIO_000300: -1.08e-1

DP
type: SiteQuality
SIO_000300: 1.202919e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.695e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.602824614497767e-5
allele num: 55512
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.085540599218411e-4
allele num: 9212
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5418
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 8.161932745674175e-5
allele num: 12252
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.309929263819754e-4
allele num: 7634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 5.465e0

VQSLOD
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SIO_000300: -8.932e-1

QD
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DP
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MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.188555819135935e-5
allele num: 55644
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 6.09e0

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.485e-1

FS
type: SiteQuality
SIO_000300: 8.337e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

DP
type: SiteQuality
SIO_000300: 1.228057e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.27000254000508e-4
allele num: 7874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.706008583690987e-4
allele num: 7456
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 3.173092178327781e-4
allele num: 12606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.135e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.265523e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

FS
type: SiteQuality
SIO_000300: 3.185e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.738646637457403e-5
allele num: 57516
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.270918e6

QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
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VQSLOD
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MQ
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SIO_000300: 5.177e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.733222407099279e-5
allele num: 57696
num of homozygotes: 0

Other
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European (Finnish)
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
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BaseQRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 1
allele frequency: 1.37438152831226e-4
allele num: 7276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.118045749788196e-4
allele num: 56656
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.955449482895784e-5
allele num: 12570
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.056189269117026e-4
allele num: 9468
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.278445410380977e-4
allele num: 7822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.819505094614265e-4
allele num: 5496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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MQ
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DP
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.041883725776203e-4
allele num: 9598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.671e1

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.382e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.283131e6

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.258811681772407e-4
allele num: 7944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.274929e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.57e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.174e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
type: SiteQuality
SIO_000300: 1.082e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.765973227845866e-5
allele num: 56626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: -1.364e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.585e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.436e0

DP
type: SiteQuality
SIO_000300: 1.256892e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

QD
type: SiteQuality
SIO_000300: 2.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.782277037142654e-5
allele num: 56108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.227e1

DP
type: SiteQuality
SIO_000300: 1.24358e6

MQ
type: SiteQuality
SIO_000300: 6.038e1

FS
type: SiteQuality
SIO_000300: 5.128e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.197e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.062e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

GenotypeQuality
all individuals: 1680
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variant carriers: 0

GenotypeQuality
all individuals: 479
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GenotypeQuality
all individuals: 750
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 1881
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2085
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 309
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GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.41196333815726e-4
allele num: 12438
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.833e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.951e0

DP
type: SiteQuality
SIO_000300: 1.226333e6

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1209
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 6.439979392065945e-4
allele num: 7764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7108
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.101806963420009e-4
allele num: 9076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

QD
type: SiteQuality
SIO_000300: 1.043e1

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

FS
type: SiteQuality
SIO_000300: 9.52e-1

MQ
type: SiteQuality
SIO_000300: 5.805e1

DP
type: SiteQuality
SIO_000300: 1.225792e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5412
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.11358574610245e-4
allele num: 8980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12386
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.754e1

VQSLOD
type: SiteQuality
SIO_000300: -1.455e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 1.213588e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

QD
type: SiteQuality
SIO_000300: 9.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 144
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.827485380116959e-5
allele num: 54720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.128e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
all individuals: 996
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17190
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.135073779795687e-4
allele num: 8810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.198704e6

QD
type: SiteQuality
SIO_000300: 1.052e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.735e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

FS
type: SiteQuality
SIO_000300: 1.2085e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.928e1