3-10384654-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384654
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384654
    reference: chr 3
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-5C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-5C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3821
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2704-5C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

3-10384655-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384655
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384655
    reference: chr 3
allele count: 1
allele frequency: 8.28953694646617e-6
allele num: 120634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-6C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-6C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9681
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2704-6C>T
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

3-10384655-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384655
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384655
    reference: chr 3
allele count: 17
allele frequency: 1.409221280899249e-4
allele num: 120634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-6C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-6C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2704-6C>A
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-10384657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384657
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384657
    reference: chr 3
allele count: 6
allele frequency: 4.97619719010732e-5
allele num: 120574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-8G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-8G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 30547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2704-8G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-10384658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384658
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384658
    reference: chr 3
allele count: 3
allele frequency: 2.490701381509033e-5
allele num: 120448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-9C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-9C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4069
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-10384658-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384658
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384658
    reference: chr 3
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-9C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-9C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

3-10384666-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384666
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384666
    reference: chr 3
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-17C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-17C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

3-10384668-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384668
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384668
    reference: chr 3
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-19C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-19C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10159
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

3-10384677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384677
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384677
    reference: chr 3
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-28G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-28G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

3-10384682-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384682
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384682
    reference: chr 3
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-33C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-33C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20027
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4519
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8885
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

3-10384683-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384683
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384683
    reference: chr 3
allele count: 2
allele frequency: 1.66433659543306e-5
allele num: 120168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-34G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-34G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-10384683-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384683
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384683
    reference: chr 3
allele count: 1
allele frequency: 8.321682977165302e-6
allele num: 120168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-34G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-34G>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

3-10384684-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384684
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384684
    reference: chr 3
allele count: 1
allele frequency: 8.323068215867098e-6
allele num: 120148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-35C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-35C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/3-10384688-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384688
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384688
    reference: chr 3
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-39T>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-39T>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-10384690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10384690
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10384690
    reference: chr 3
allele count: 13
allele frequency: 1.082828013593656e-4
allele num: 120056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2569-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2569-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2704-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2272-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2662-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2569-41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2704-41G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24053
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

3-10387017-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387017
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387017
    reference: chr 3
allele count: 1
allele frequency: 8.538980445734779e-6
allele num: 117110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+51C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+51C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6891
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP

3-10387017-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387017
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387017
    reference: chr 3
allele count: 1
allele frequency: 8.538980445734779e-6
allele num: 117110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+51C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+51C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11087
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6891
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-10387018-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387018
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387018
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 117174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+50C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+50C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13198
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-10387020-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387020
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387020
    reference: chr 3
allele count: 14
allele frequency: 1.192849717976245e-4
allele num: 117366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+48C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+48C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11552
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10216
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

3-10387021-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387021
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387021
    reference: chr 3
allele count: 1
allele frequency: 8.519919571959241e-6
allele num: 117372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+47C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+47C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11804
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

3-10387022-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387022
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387022
    reference: chr 3
allele count: 1
allele frequency: 8.515276405872134e-6
allele num: 117436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+46C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+46C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11012
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-10387022-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387022
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387022
    reference: chr 3
allele count: 2
allele frequency: 1.703055281174427e-5
allele num: 117436
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+46C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+46C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15289
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD

3-10387027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387027
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387027
    reference: chr 3
allele count: 13
allele frequency: 1.106627849566713e-4
allele num: 117474
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+41G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+41G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10494
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13566
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2696
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

3-10387028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387028
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387028
    reference: chr 3
allele count: 1
allele frequency: 8.506439374606578e-6
allele num: 117558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+40C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+40C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7374
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11053
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-10387030-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387030
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387030
    reference: chr 3
allele count: 2
allele frequency: 1.697245370763251e-5
allele num: 117838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+38G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+38G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11104
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

3-10387032-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387032
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387031
    reference: chr 3
allele count: 1
allele frequency: 8.481908090043937e-6
allele num: 117898
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+35delG
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+35delG
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14930
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: TC
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

3-10387035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387035
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387035
    reference: chr 3
allele count: 5
allele frequency: 4.233413485962001e-5
allele num: 118108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+33G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+33G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16547
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11149
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2846
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3558
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

3-10387048-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387048
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387048
    reference: chr 3
allele count: 1
allele frequency: 8.353939717970996e-6
allele num: 119704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+20C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+20C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3691
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-10387057-T-TGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387057
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387060
    reference: chr 3
allele count: 7
allele frequency: 5.800752440459419e-5
allele num: 120674
alternate allele: TGCG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+8_2568+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+8_2568+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+8_2568+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+8_2661+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+8_2703+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+8_2703+10dupCGC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+8_2271+10dupCGC
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5962
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-10387059-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387059
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387059
    reference: chr 3
allele count: 53751
allele frequency: 4.444435257152307e-1
allele num: 120940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+9G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+9G>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 4.25e1
  variant carriers: 3841
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 6.25e1
  variant carriers: 3812
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 2.75e1
  variant carriers: 1144
genotype depth: GenotypeDepth
  all individuals: 5239
  bin: 3.25e1
  variant carriers: 1937
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 7.75e1
  variant carriers: 1778
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 2883
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 8.25e1
  variant carriers: 1243
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 9.75e1
  variant carriers: 2497
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.25e1
  variant carriers: 2262
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 4.75e1
  variant carriers: 4714
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 6.75e1
  variant carriers: 3103
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 9.25e1
  variant carriers: 735
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 5.25e1
  variant carriers: 4855
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 932
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 5.75e1
  variant carriers: 4377
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 2.25e1
  variant carriers: 570
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 7.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 14
num of homozygotes: 12818
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

3-10387060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387060
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387060
    reference: chr 3
allele count: 82
allele frequency: 6.762328880092364e-4
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568+8C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271+8C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11091
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27017
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14399
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36883
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2703+8C>T
num of homozygotes: 1
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

3-10387068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387068
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387068
    reference: chr 3
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2661G>A
  hgvsp: ENST00000343816.4:c.2661G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2703G>A
  hgvsp: ENST00000352432.4:c.2703G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2568G>A
  hgvsp: ENST00000460129.1:c.2568G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2703G>A
  hgvsp: ENST00000360273.2:c.2703G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2568G>A
  hgvsp: ENST00000397077.1:c.2568G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2568G>A
  hgvsp: ENST00000383800.4:c.2568G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2271G>A
  hgvsp: ENST00000452124.1:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14421
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
hgvs: c.2703G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-10387071-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387071
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387071
    reference: chr 3
allele count: 3
allele frequency: 2.472310126582278e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2700G>A
  hgvsp: ENST00000360273.2:c.2700G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2700G>A
  hgvsp: ENST00000352432.4:c.2700G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2658G>A
  hgvsp: ENST00000343816.4:c.2658G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2565G>A
  hgvsp: ENST00000383800.4:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2268G>A
  hgvsp: ENST00000452124.1:c.2268G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2565G>A
  hgvsp: ENST00000397077.1:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2565G>A
  hgvsp: ENST00000460129.1:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr900Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

3-10387076-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387076
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387076
    reference: chr 3
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2560A>G
  hgvsp: ENSP00000424494.1:p.Ile854Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2695A>G
  hgvsp: ENSP00000353414.2:p.Ile899Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2560A>G
  hgvsp: ENSP00000373311.4:p.Ile854Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2695A>G
  hgvsp: ENSP00000324172.5:p.Ile899Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2560A>G
  hgvsp: ENSP00000380267.1:p.Ile854Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2653A>G
  hgvsp: ENSP00000344677.4:p.Ile885Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2263A>G
  hgvsp: ENSP00000414854.1:p.Ile755Val
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile899Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-10387082-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387082
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387082
    reference: chr 3
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2554G>A
  hgvsp: ENSP00000373311.4:p.Ala852Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2554G>A
  hgvsp: ENSP00000424494.1:p.Ala852Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2257G>A
  hgvsp: ENSP00000414854.1:p.Ala753Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2689G>A
  hgvsp: ENSP00000353414.2:p.Ala897Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2554G>A
  hgvsp: ENSP00000380267.1:p.Ala852Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2647G>A
  hgvsp: ENSP00000344677.4:p.Ala883Thr
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2689G>A
  hgvsp: ENSP00000324172.5:p.Ala897Thr
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala897Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

3-10387083-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387083
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387083
    reference: chr 3
allele count: 6
allele frequency: 4.943561011782154e-5
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2646C>T
  hgvsp: ENST00000343816.4:c.2646C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2256C>T
  hgvsp: ENST00000452124.1:c.2256C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2553C>T
  hgvsp: ENST00000397077.1:c.2553C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2553C>T
  hgvsp: ENST00000460129.1:c.2553C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2688C>T
  hgvsp: ENST00000352432.4:c.2688C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2553C>T
  hgvsp: ENST00000383800.4:c.2553C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2688C>T
  hgvsp: ENST00000360273.2:c.2688C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37478
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly896Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

3-10387092-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387092
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387092
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2544C>T
  hgvsp: ENST00000397077.1:c.2544C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2679C>T
  hgvsp: ENST00000352432.4:c.2679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2679C>T
  hgvsp: ENST00000360273.2:c.2679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2544C>T
  hgvsp: ENST00000383800.4:c.2544C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2544C>T
  hgvsp: ENST00000460129.1:c.2544C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2247C>T
  hgvsp: ENST00000452124.1:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2637C>T
  hgvsp: ENST00000343816.4:c.2637C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala893Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

3-10387104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387104
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387104
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2667C>T
  hgvsp: ENST00000352432.4:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2532C>T
  hgvsp: ENST00000397077.1:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2667C>T
  hgvsp: ENST00000360273.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2235C>T
  hgvsp: ENST00000452124.1:c.2235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2532C>T
  hgvsp: ENST00000383800.4:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2625C>T
  hgvsp: ENST00000343816.4:c.2625C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2532C>T
  hgvsp: ENST00000460129.1:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10757
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala889Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

3-10387107-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387107
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387107
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2529G>A
  hgvsp: ENST00000383800.4:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2232G>A
  hgvsp: ENST00000452124.1:c.2232G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2529G>A
  hgvsp: ENST00000397077.1:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2622G>A
  hgvsp: ENST00000343816.4:c.2622G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2529G>A
  hgvsp: ENST00000460129.1:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2664G>A
  hgvsp: ENST00000360273.2:c.2664G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2664G>A
  hgvsp: ENST00000352432.4:c.2664G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val888Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

3-10387112-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387112
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387112
    reference: chr 3
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2524G>A
  hgvsp: ENSP00000373311.4:p.Val842Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2524G>A
  hgvsp: ENSP00000424494.1:p.Val842Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2659G>A
  hgvsp: ENSP00000324172.5:p.Val887Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2524G>A
  hgvsp: ENSP00000380267.1:p.Val842Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2659G>A
  hgvsp: ENSP00000353414.2:p.Val887Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2617G>A
  hgvsp: ENSP00000344677.4:p.Val873Met
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2227G>A
  hgvsp: ENSP00000414854.1:p.Val743Met
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val887Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

3-10387113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387113
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387113
    reference: chr 3
allele count: 18
allele frequency: 1.482652960363744e-4
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2523C>T
  hgvsp: ENST00000383800.4:c.2523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2226C>T
  hgvsp: ENST00000452124.1:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2523C>T
  hgvsp: ENST00000460129.1:c.2523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2523C>T
  hgvsp: ENST00000397077.1:c.2523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2616C>T
  hgvsp: ENST00000343816.4:c.2616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2658C>T
  hgvsp: ENST00000352432.4:c.2658C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2658C>T
  hgvsp: ENST00000360273.2:c.2658C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3062
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn886Asn
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

3-10387119-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387119
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387119
    reference: chr 3
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2517C>T
  hgvsp: ENST00000460129.1:c.2517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2517C>T
  hgvsp: ENST00000383800.4:c.2517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2220C>T
  hgvsp: ENST00000452124.1:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2652C>T
  hgvsp: ENST00000360273.2:c.2652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2517C>T
  hgvsp: ENST00000397077.1:c.2517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2610C>T
  hgvsp: ENST00000343816.4:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2652C>T
  hgvsp: ENST00000352432.4:c.2652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr884Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

3-10387155-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387155
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387155
    reference: chr 3
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2184T>C
  hgvsp: ENST00000452124.1:c.2184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2616T>C
  hgvsp: ENST00000352432.4:c.2616T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2616T>C
  hgvsp: ENST00000360273.2:c.2616T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2481T>C
  hgvsp: ENST00000460129.1:c.2481T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2481T>C
  hgvsp: ENST00000383800.4:c.2481T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2574T>C
  hgvsp: ENST00000343816.4:c.2574T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2481T>C
  hgvsp: ENST00000397077.1:c.2481T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr872Tyr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

3-10387161-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387161
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387161
    reference: chr 3
allele count: 10
allele frequency: 8.237367996177861e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2610C>T
  hgvsp: ENST00000352432.4:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2475C>T
  hgvsp: ENST00000397077.1:c.2475C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2475C>T
  hgvsp: ENST00000460129.1:c.2475C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2610C>T
  hgvsp: ENST00000360273.2:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2475C>T
  hgvsp: ENST00000383800.4:c.2475C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2568C>T
  hgvsp: ENST00000343816.4:c.2568C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2178C>T
  hgvsp: ENST00000452124.1:c.2178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn870Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/3-10387165-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387165
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387165
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2471G>T
  hgvsp: ENSP00000424494.1:p.Arg824Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2606G>T
  hgvsp: ENSP00000353414.2:p.Arg869Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2606G>T
  hgvsp: ENSP00000324172.5:p.Arg869Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2564G>T
  hgvsp: ENSP00000344677.4:p.Arg855Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2471G>T
  hgvsp: ENSP00000373311.4:p.Arg824Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2471G>T
  hgvsp: ENSP00000380267.1:p.Arg824Leu
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2174G>T
  hgvsp: ENSP00000414854.1:p.Arg725Leu
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg869Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

3-10387179-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387179
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387179
    reference: chr 3
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2457A>G
  hgvsp: ENST00000383800.4:c.2457A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2592A>G
  hgvsp: ENST00000360273.2:c.2592A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2592A>G
  hgvsp: ENST00000352432.4:c.2592A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2550A>G
  hgvsp: ENST00000343816.4:c.2550A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2160A>G
  hgvsp: ENST00000452124.1:c.2160A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2457A>G
  hgvsp: ENST00000397077.1:c.2457A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2457A>G
  hgvsp: ENST00000460129.1:c.2457A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37638
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala864Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

3-10387187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387187
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387187
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2542G>A
  hgvsp: ENSP00000344677.4:p.Val848Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2449G>A
  hgvsp: ENSP00000424494.1:p.Val817Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2584G>A
  hgvsp: ENSP00000353414.2:p.Val862Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2449G>A
  hgvsp: ENSP00000380267.1:p.Val817Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2584G>A
  hgvsp: ENSP00000324172.5:p.Val862Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2449G>A
  hgvsp: ENSP00000373311.4:p.Val817Ile
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2152G>A
  hgvsp: ENSP00000414854.1:p.Val718Ile
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val862Ile
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-10387194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387194
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387194
    reference: chr 3
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2442C>T
  hgvsp: ENST00000460129.1:c.2442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2577C>T
  hgvsp: ENST00000360273.2:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2145C>T
  hgvsp: ENST00000452124.1:c.2145C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2442C>T
  hgvsp: ENST00000397077.1:c.2442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2442C>T
  hgvsp: ENST00000383800.4:c.2442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2535C>T
  hgvsp: ENST00000343816.4:c.2535C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2577C>T
  hgvsp: ENST00000352432.4:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser859Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

3-10387206-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387206
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387206
    reference: chr 3
allele count: 18
allele frequency: 1.482970554795762e-4
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2430C>T
  hgvsp: ENST00000460129.1:c.2430C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2133C>T
  hgvsp: ENST00000452124.1:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2430C>T
  hgvsp: ENST00000383800.4:c.2430C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2430C>T
  hgvsp: ENST00000397077.1:c.2430C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2565C>T
  hgvsp: ENST00000360273.2:c.2565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2523C>T
  hgvsp: ENST00000343816.4:c.2523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2565C>T
  hgvsp: ENST00000352432.4:c.2565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37606
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp855Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

3-10387209-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387209
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387209
    reference: chr 3
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2562A>G
  hgvsp: ENST00000352432.4:c.2562A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2520A>G
  hgvsp: ENST00000343816.4:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2427A>G
  hgvsp: ENST00000383800.4:c.2427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2562A>G
  hgvsp: ENST00000360273.2:c.2562A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2427A>G
  hgvsp: ENST00000460129.1:c.2427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2130A>G
  hgvsp: ENST00000452124.1:c.2130A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2427A>G
  hgvsp: ENST00000397077.1:c.2427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3467
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr854Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

3-10387214-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387214
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387214
    reference: chr 3
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2557C>G
  hgvsp: ENSP00000353414.2:p.Leu853Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2422C>G
  hgvsp: ENSP00000373311.4:p.Leu808Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2515C>G
  hgvsp: ENSP00000344677.4:p.Leu839Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2422C>G
  hgvsp: ENSP00000380267.1:p.Leu808Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2422C>G
  hgvsp: ENSP00000424494.1:p.Leu808Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2125C>G
  hgvsp: ENSP00000414854.1:p.Leu709Val
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2557C>G
  hgvsp: ENSP00000324172.5:p.Leu853Val
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu853Val
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-10387224-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387224
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387224
    reference: chr 3
allele count: 2
allele frequency: 1.648261084555794e-5
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2547A>C
  hgvsp: ENST00000352432.4:c.2547A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2412A>C
  hgvsp: ENST00000460129.1:c.2412A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2505A>C
  hgvsp: ENST00000343816.4:c.2505A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2547A>C
  hgvsp: ENST00000360273.2:c.2547A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2412A>C
  hgvsp: ENST00000383800.4:c.2412A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2412A>C
  hgvsp: ENST00000397077.1:c.2412A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2115A>C
  hgvsp: ENST00000452124.1:c.2115A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3457
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser849Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-10387242-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387242
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387242
    reference: chr 3
allele count: 146
allele frequency: 1.204699980196713e-3
allele num: 121192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2394C>T
  hgvsp: ENST00000397077.1:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2487C>T
  hgvsp: ENST00000343816.4:c.2487C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2529C>T
  hgvsp: ENST00000360273.2:c.2529C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2394C>T
  hgvsp: ENST00000383800.4:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2394C>T
  hgvsp: ENST00000460129.1:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2529C>T
  hgvsp: ENST00000352432.4:c.2529C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2097C>T
  hgvsp: ENST00000452124.1:c.2097C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27207
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10640
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp843Asp
num of homozygotes: 1
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

3-10387265-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387265
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387265
    reference: chr 3
allele count: 1
allele frequency: 8.309098462816784e-6
allele num: 120350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-6C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-6C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35596
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2512-6C>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

3-10387267-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387267
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387266
    reference: chr 3
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-9delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-9delT
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9881
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35991
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: GA
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-10387275-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387275
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387274
    reference: chr 3
allele count: 31
allele frequency: 2.585315408479835e-4
allele num: 119908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-17delT
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-17delT
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10778
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25125
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: CA
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

3-10387277-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387277
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387277
    reference: chr 3
allele count: 1
allele frequency: 8.351149118118652e-6
allele num: 119744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-18C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-18C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

3-10387278-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387278
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387278
    reference: chr 3
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-19C>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-19C>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

3-10387282-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387282
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387282
    reference: chr 3
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-23G>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-23G>C
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23569
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32678
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-10387285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387285
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387285
    reference: chr 3
allele count: 2
allele frequency: 1.678190239645566e-5
allele num: 119176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-26C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-26C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30704
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

3-10387285-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387285
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387285
    reference: chr 3
allele count: 2
allele frequency: 1.678190239645566e-5
allele num: 119176
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-26C>G
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-26C>G
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22172
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4617
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

3-10387287-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387287
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387286
    reference: chr 3
allele count: 2
allele frequency: 1.68061577762092e-5
allele num: 119004
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-29delC
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-29delC
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: TG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

3-10387293-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387293
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387293
    reference: chr 3
allele count: 1
allele frequency: 8.459091831900928e-6
allele num: 118216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-34C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-34C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6725
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21344
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3581
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-10387295-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387295
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387295
    reference: chr 3
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-36G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-36G>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6791
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-10387295-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387295
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387295
    reference: chr 3
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-36G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-36G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6791
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4886
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-10387296-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387296
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387296
    reference: chr 3
allele count: 9
allele frequency: 7.671849427168576e-5
allele num: 117312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-37G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-37G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15403
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12707
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3266
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5843
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

3-10387297-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387297
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387297
    reference: chr 3
allele count: 57
allele frequency: 4.882226980728051e-4
allele num: 116750
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-38C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-38C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13626
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4455
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

3-10387301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387301
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387301
    reference: chr 3
allele count: 1
allele frequency: 8.576917798819816e-6
allele num: 116592
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-42C>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-42C>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12793
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7079
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16916
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-10387308-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387308
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387308
    reference: chr 3
allele count: 1
allele frequency: 8.781327385447585e-6
allele num: 113878
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2512-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2470-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2377-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2377-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2512-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2377-49G>T
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2080-49G>T
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14342
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3653
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4001
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

3-10387667-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387667
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387667
    reference: chr 3
allele count: 1
allele frequency: 1.87955792797534e-5
allele num: 53204
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2511+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2376+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2469+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2511+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2079+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2376+48T>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2376+48T>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15253
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6643
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6448
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5349
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5303
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

3-10387668-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387668
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387668
    reference: chr 3
allele count: 15
allele frequency: 2.816266756787203e-4
allele num: 53262
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2511+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2511+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2079+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2376+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2469+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2376+47T>C
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2376+47T>C
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15277
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25849
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6644
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5400
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5933
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4066
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 9.25e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

3-10387675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10387675
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 10387675
    reference: chr 3
allele count: 5
allele frequency: 9.074739554974772e-5
allele num: 55098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000424494
  ensembl transcript: ENST00000460129
  gene symbol: ATP2B2
  hgvsc: ENST00000460129.1:c.2376+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000324172
  ensembl transcript: ENST00000352432
  gene symbol: ATP2B2
  hgvsc: ENST00000352432.4:c.2511+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000353414
  ensembl transcript: ENST00000360273
  gene symbol: ATP2B2
  hgvsc: ENST00000360273.2:c.2511+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000373311
  ensembl transcript: ENST00000383800
  gene symbol: ATP2B2
  hgvsc: ENST00000383800.4:c.2376+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000344677
  ensembl transcript: ENST00000343816
  gene symbol: ATP2B2
  hgvsc: ENST00000343816.4:c.2469+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000380267
  ensembl transcript: ENST00000397077
  gene symbol: ATP2B2
  hgvsc: ENST00000397077.1:c.2376+40G>A
  variant of: http://identifiers.org/hgnc/815
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157087
  ensembl protein: ENSP00000414854
  ensembl transcript: ENST00000452124
  gene symbol: ATP2B2
  hgvsc: ENST00000452124.1:c.2079+40G>A
  variant of: http://identifiers.org/hgnc/815
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26299
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15516
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 1
reference allele: C

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30506
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9684
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4069
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3040
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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QD
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MQ
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DP
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.508022680661117e-5
allele num: 66312
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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QD
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 16
allele frequency: 2.412836289057787e-4
allele num: 66312
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6492
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South Asian
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Latino
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allele num: 11546
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

QD
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FS
type: SiteQuality
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MQ
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 10260
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.526798647996137e-5
allele num: 66272
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Latino
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BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
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SIO_000300: -1.17e-1

ClippingRankSum
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MQ
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SIO_000300: 5.962e1

InbreedingCoeff
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 6.759e0

ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 3.021056765656627e-5
allele num: 66202
num of homozygotes: 0

Latino
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allele frequency: 8.665511265164645e-5
allele num: 11540
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South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.295e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.510528382828313e-5
allele num: 66202
num of homozygotes: 0

South Asian
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
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African
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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num of homozygotes: 0

QD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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Other
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QD
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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East Asian
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South Asian
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Other
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European (Finnish)
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African
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Latino
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QD
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ClippingRankSum
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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MQRankSum
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ClippingRankSum
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QD
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MQ
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1702
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.092360180333861e-5
allele num: 16414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66122
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

DP
type: SiteQuality
SIO_000300: 1.63249e6

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

QD
type: SiteQuality
SIO_000300: 1.493e1

FS
type: SiteQuality
SIO_000300: 2.677e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3003
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512355948095944e-5
allele num: 66122
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

DP
type: SiteQuality
SIO_000300: 1.63249e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

FS
type: SiteQuality
SIO_000300: 2.677e0

QD
type: SiteQuality
SIO_000300: 1.493e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10220
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.512721991952319e-5
allele num: 66106
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.132e0

QD
type: SiteQuality
SIO_000300: 1.298e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

FS
type: SiteQuality
SIO_000300: 1.218e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.631513e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.514463122822959e-5
allele num: 66030
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.705e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

BaseQRankSum
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SIO_000300: -3.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

DP
type: SiteQuality
SIO_000300: 1.620451e6

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.961553550411926e-4
allele num: 10196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.513134003147319e-4
allele num: 66088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.52e1

DP
type: SiteQuality
SIO_000300: 1.615495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.243162605668821e-4
allele num: 8044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

DP
type: SiteQuality
SIO_000300: 1.721689e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64214
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.545595054095827e-4
allele num: 6470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.406e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.206e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 1.721689e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.721494e6

MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 8.524111056989771e-4
allele num: 16424
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
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VQSLOD
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ReadPosRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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allele num: 11238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

European (Finnish)
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Other
type: Population
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allele frequency: 0.0e0
allele num: 888
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ReadPosRankSum
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SIO_000300: 1.74e0

ClippingRankSum
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SIO_000300: -5.21e-1

FS
type: SiteQuality
SIO_000300: 7.005e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.244e0

DP
type: SiteQuality
SIO_000300: 1.725075e6

QD
type: SiteQuality
SIO_000300: 6.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.009e0

GenotypeQuality
all individuals: 3694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.237317495669389e-4
allele num: 8082
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 1.726388e6

QD
type: SiteQuality
SIO_000300: 1.813e1

GenotypeQuality
all individuals: 1650
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.105590062111801e-5
allele num: 64400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 1.726388e6

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 1.813e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 7.060722211014727e-4
allele num: 9914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084945843981989e-5
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.626773596545342e-4
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.104336758451557e-5
allele num: 64426
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 1.744171e6

QD
type: SiteQuality
SIO_000300: 1.567e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeQuality
all individuals: 3403
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1304
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variant carriers: 0

GenotypeQuality
all individuals: 1274
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551445947623185e-5
allele num: 64456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.09e0

QD
type: SiteQuality
SIO_000300: 1.573e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

DP
type: SiteQuality
SIO_000300: 1.75329e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

GenotypeQuality
all individuals: 19169
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variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 524
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GenotypeQuality
all individuals: 4521
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3513
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variant carriers: 0

GenotypeQuality
all individuals: 2769
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.876264867743653e-5
allele num: 11266
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.765748e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.464e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

GenotypeQuality
all individuals: 1034
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 325
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GenotypeQuality
all individuals: 2787
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.992006394884092e-5
allele num: 10008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.521e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.679e0

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.455e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.102e1

DP
type: SiteQuality
SIO_000300: 1.774068e6

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4001
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64762
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.852691218130312e-5
allele num: 11296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.981684252438782e-4
allele num: 10046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

DP
type: SiteQuality
SIO_000300: 1.783994e6

FS
type: SiteQuality
SIO_000300: 5.537e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

QD
type: SiteQuality
SIO_000300: 1.293e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.678e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11217
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21885
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520681265206813e-5
allele num: 65760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.318e0

DP
type: SiteQuality
SIO_000300: 1.81972e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.62e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 3.009e1

GenotypeQuality
all individuals: 22515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4911
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11258
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4229
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variant carriers: 0

GenotypeQuality
all individuals: 8110
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.835589941972921e-4
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507886245061673e-5
allele num: 66318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.405e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e-1

QD
type: SiteQuality
SIO_000300: 1.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.571e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.83412e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-1

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 148

GenotypeQuality
all individuals: 3244
bin: 6.75e1
variant carriers: 127

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 30

GenotypeQuality
all individuals: 40444
bin: 9.75e1
variant carriers: 39622

GenotypeQuality
all individuals: 12744
bin: 6.25e1
variant carriers: 86

GenotypeQuality
all individuals: 976
bin: 7.75e1
variant carriers: 168

GenotypeQuality
all individuals: 637
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variant carriers: 169

GenotypeQuality
all individuals: 461
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variant carriers: 235

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 31

South Asian
type: Population
allele count: 9330
allele frequency: 5.653860138165071e-1
allele num: 16502
num of homozygotes: 2693

East Asian
type: Population
allele count: 4465
allele frequency: 5.207604385351061e-1
allele num: 8574
num of homozygotes: 1186

Other
type: Population
allele count: 417
allele frequency: 4.623059866962306e-1
allele num: 902
num of homozygotes: 103

African
type: Population
allele count: 1461
allele frequency: 1.412686134210017e-1
allele num: 10342
num of homozygotes: 99

European (Finnish)
type: Population
allele count: 2909
allele frequency: 4.418286755771568e-1
allele num: 6584
num of homozygotes: 640

European (Non-Finnish)
type: Population
allele count: 28112
allele frequency: 4.227622714148219e-1
allele num: 66496
num of homozygotes: 5911

Latino
type: Population
allele count: 7057
allele frequency: 6.115251299826689e-1
allele num: 11540
num of homozygotes: 2186

BaseQRankSum
type: SiteQuality
SIO_000300: -3.055e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

QD
type: SiteQuality
SIO_000300: 2.04e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.49e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.933132e6

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
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variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2974
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 103
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variant carriers: 0

GenotypeQuality
all individuals: 10692
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GenotypeQuality
all individuals: 3632
bin: 9.75e1
variant carriers: 81

GenotypeQuality
all individuals: 3075
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 4.335260115606936e-3
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.250427581240436e-4
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.791058605513088e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.26832222895215e-4
allele num: 16510
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.404e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

DP
type: SiteQuality
SIO_000300: 1.820597e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2950
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 10728
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998500749625187e-5
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.102e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

DP
type: SiteQuality
SIO_000300: 1.819421e6

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.402e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.349e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 564
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GenotypeQuality
all individuals: 37338
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 718
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3067
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.820029e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.976e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.762e0

QD
type: SiteQuality
SIO_000300: 2.624e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 1550
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GenotypeQuality
all individuals: 10733
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variant carriers: 0

GenotypeQuality
all individuals: 566
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GenotypeQuality
all individuals: 3527
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variant carriers: 2

GenotypeQuality
all individuals: 37417
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e-1

DP
type: SiteQuality
SIO_000300: 1.820347e6

QD
type: SiteQuality
SIO_000300: 1.434e1

GenotypeQuality
all individuals: 3067
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 715
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.820811e6

FS
type: SiteQuality
SIO_000300: 2.683e0

VQSLOD
type: SiteQuality
SIO_000300: -2.498e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.354e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.62e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10752
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3510
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

DP
type: SiteQuality
SIO_000300: 1.820939e6

QD
type: SiteQuality
SIO_000300: 1.361e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10759
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
all individuals: 3499
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variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.024e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e0

QD
type: SiteQuality
SIO_000300: 2.587e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

FS
type: SiteQuality
SIO_000300: 1.0953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

DP
type: SiteQuality
SIO_000300: 1.821003e6

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2936
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
SIO_000300: 9.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.82e-1

DP
type: SiteQuality
SIO_000300: 1.821193e6

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.616e0

FS
type: SiteQuality
SIO_000300: 2.979e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2933
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GenotypeQuality
all individuals: 3062
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11576
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South Asian
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allele num: 16510
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BaseQRankSum
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SIO_000300: -4.422e0

DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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FS
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SIO_000300: 1.871e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -2.622e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 14
allele frequency: 1.34563629373318e-3
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.822189e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.87e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 1.821119e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.96e0

DP
type: SiteQuality
SIO_000300: 1.821221e6

ReadPosRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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African
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allele count: 6
allele frequency: 5.768121515093252e-4
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
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VQSLOD
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
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East Asian
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Other
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allele frequency: 0.0e0
allele num: 906
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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South Asian
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ReadPosRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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South Asian
type: Population
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Other
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allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 1.820862e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.961e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.359e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 706
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
all individuals: 1543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.098258445490243e-4
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.820971e6

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

FS
type: SiteQuality
SIO_000300: 1.124e0

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3060
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GenotypeQuality
all individuals: 706
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

FS
type: SiteQuality
SIO_000300: 2.214e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 1.820026e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1537
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.348e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.099e0

DP
type: SiteQuality
SIO_000300: 1.819853e6

QD
type: SiteQuality
SIO_000300: 1.33e1

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37597
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GenotypeQuality
all individuals: 705
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

FS
type: SiteQuality
SIO_000300: 1.185e0

DP
type: SiteQuality
SIO_000300: 1.818887e6

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.178e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 37345
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variant carriers: 0

GenotypeQuality
all individuals: 250
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3483
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variant carriers: 144

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2856
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GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 140
allele frequency: 8.514779223938694e-3
allele num: 16442
num of homozygotes: 1

Latino
type: Population
allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.251e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

FS
type: SiteQuality
SIO_000300: 6.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.428e0

DP
type: SiteQuality
SIO_000300: 1.8126e6

GenotypeQuality
all individuals: 337
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variant carriers: 0

GenotypeQuality
all individuals: 265
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3302
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variant carriers: 1

GenotypeQuality
all individuals: 664
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.267e1

FS
type: SiteQuality
SIO_000300: 2.658e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.767e0

DP
type: SiteQuality
SIO_000300: 1.770131e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 118
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508068164681044e-5
allele num: 66310
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.012e0

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2549
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GenotypeQuality
all individuals: 772
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 31
allele frequency: 3.604651162790698e-3
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.476e0

FS
type: SiteQuality
SIO_000300: 1.106e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.008e1

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3287
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9427
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.25312656328164e-5
allele num: 15992
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.553e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.731469e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.53e-1

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515335192144502e-5
allele num: 65992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15982
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 1.71948e6

QD
type: SiteQuality
SIO_000300: 7.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.48e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517680983457277e-5
allele num: 65890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.764e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

DP
type: SiteQuality
SIO_000300: 1.698738e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.779e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.994e0

QD
type: SiteQuality
SIO_000300: 7.13e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947798987144527e-4
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 3.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.15e0

QD
type: SiteQuality
SIO_000300: 1.105e1

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.663586e6

GenotypeQuality
all individuals: 1282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30704
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.041270034366351e-5
allele num: 65762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.637e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.15e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.105e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.663586e6

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7906
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.044603440401888e-5
allele num: 65690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.028e1

DP
type: SiteQuality
SIO_000300: 1.627764e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeQuality
all individuals: 4250
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
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variant carriers: 0

GenotypeQuality
all individuals: 5533
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 443
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5068
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.777082518576456e-5
allele num: 10228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.561e0

QD
type: SiteQuality
SIO_000300: 1.475e1

FS
type: SiteQuality
SIO_000300: 1.701e0

MQRankSum
type: SiteQuality
SIO_000300: 2.83e0

VQSLOD
type: SiteQuality
SIO_000300: -2.348e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.64e-1

DP
type: SiteQuality
SIO_000300: 1.508935e6

MQ
type: SiteQuality
SIO_000300: 5.851e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.14e-1

GenotypeQuality
all individuals: 109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536239899222663e-5
allele num: 65094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.50337e6

QD
type: SiteQuality
SIO_000300: 1.048e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.031e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

FS
type: SiteQuality
SIO_000300: 3.074e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3269
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15432
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.868393047179851e-5
allele num: 11276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e0

FS
type: SiteQuality
SIO_000300: 3.074e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.031e0

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 1.50337e6

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
all individuals: 1793
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 249
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GenotypeQuality
all individuals: 1088
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1754
bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540499738115044e-5
allele num: 64914
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.271823059808926e-4
allele num: 15282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.968891514077574e-4
allele num: 10158
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.1838e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

DP
type: SiteQuality
SIO_000300: 1.485655e6

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

QD
type: SiteQuality
SIO_000300: 1.343e1

VQSLOD
type: SiteQuality
SIO_000300: -1.19e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 57

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 419
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GenotypeQuality
all individuals: 3785
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.574803149606299e-4
allele num: 6350
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 8.510506607247857e-4
allele num: 64626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.46963e6

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

QD
type: SiteQuality
SIO_000300: 1.501e1

GenotypeQuality
all individuals: 361
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5943
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2505
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.430021e6

VQSLOD
type: SiteQuality
SIO_000300: -8.249e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: 8.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.033e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.833e0

GenotypeQuality
all individuals: 1500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7005
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7022
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.888950124001103e-5
allele num: 14516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.077e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.934e0

DP
type: SiteQuality
SIO_000300: 1.386167e6

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3685
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4147
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.426535087719298e-5
allele num: 29184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.54e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.92543e5

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

QD
type: SiteQuality
SIO_000300: 1.845e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1225
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3677
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 468
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5289
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1056
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29228
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 4.127682993946065e-3
allele num: 3634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1970
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.53e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 5.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 6.95169e5

QD
type: SiteQuality
SIO_000300: 1.299e1

MQ
type: SiteQuality
SIO_000300: 6.0e1