2-202073754-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073754
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073754
    reference: chr 2
allele count: 17
allele frequency: 1.574744798710562e-4
allele num: 107954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-39C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-39C>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11976
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13201
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4961
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6655
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-202073755-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073755
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073755
    reference: chr 2
allele count: 1
allele frequency: 9.198954998712147e-6
allele num: 108708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-38T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-38T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6572
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9555
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12021
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-202073761-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073761
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073758
    reference: chr 2
allele count: 13
allele frequency: 1.190781519070824e-4
allele num: 109172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-31_923-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-31_923-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-31_794-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-31_831-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-31_722-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-31_794-29delCTC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-31_*9-29delCTC
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 9903
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13593
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9805
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10847
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16825
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TCTC
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

2-202073762-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073762
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073762
    reference: chr 2
allele count: 1
allele frequency: 9.407868741415319e-6
allele num: 106294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-31C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-31C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16047
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9052
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

2-202073764-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073765
    reference: chr 2
allele count: 4823
allele frequency: 1.31898484931357e-1
allele num: 36566
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-13dupT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-13dupT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 1043
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 1389
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 1700
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 759
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 333
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 6.25e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 295
genotype quality: GenotypeQuality
  all individuals: 34312
  bin: 2.5e0
  variant carriers: 278
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 306
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.75e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 272
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 259
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 223
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.25e1
  variant carriers: 258
num of homozygotes: 13
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-202073764-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073766
    reference: chr 2
allele count: 362
allele frequency: 9.899907017447902e-3
allele num: 36566
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-14_831-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-14_923-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-14_794-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-14_794-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-14_923-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-14_722-13dupTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-14_*9-13dupTT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34312
  bin: 2.5e0
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 31
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

2-202073764-C-CTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073767
    reference: chr 2
allele count: 70
allele frequency: 1.914346660832467e-3
allele num: 36566
alternate allele: CTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-15_794-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-15_831-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-15_*9-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-15_722-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-15_923-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-15_923-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-15_794-13dupTTT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34312
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 9.75e1
  variant carriers: 43
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

2-202073764-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073763
    reference: chr 2
allele count: 7596
allele frequency: 2.077339605097632e-1
allele num: 36566
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-13delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-13delT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 924
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 920
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 2492
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 2073
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 478
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 1725
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 301
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 5.25e1
  variant carriers: 551
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 540
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.25e1
  variant carriers: 546
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 9.75e1
  variant carriers: 1296
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 315
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 495
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 6.25e1
  variant carriers: 439
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 508
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 456
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.75e1
  variant carriers: 457
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: CT
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

2-202073764-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073762
    reference: chr 2
allele count: 1171
allele frequency: 3.202428485478313e-2
allele num: 36566
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-14_923-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-14_*9-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-14_794-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-14_923-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-14_831-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-14_722-13delTT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-14_794-13delTT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 72
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: CTT
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

2-202073764-CTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073761
    reference: chr 2
allele count: 187
allele frequency: 5.114040365366735e-3
allele num: 36566
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 2.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 1.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 5.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 34312
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 9.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.75e1
  variant carriers: 5
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 3
  allele frequency: 1.431297709923664e-3
  allele num: 2096
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 270
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 42
  allele frequency: 1.129032258064516e-2
  allele num: 3720
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 14
  allele frequency: 5.177514792899409e-3
  allele num: 2704
  num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: CTTT
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

2-202073765-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073765
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073766
    reference: chr 2
allele count: 6
allele frequency: 5.828638041577618e-4
allele num: 10294
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-28_*9-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-28_831-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-28_794-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-28_923-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-28_923-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-28_722-27insC
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-28_794-27insC
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

2-202073766-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073766
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073766
    reference: chr 2
allele count: 22
allele frequency: 5.514890203549583e-4
allele num: 39892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-27T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-27T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3100
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27336
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-202073767-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073767
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073767
    reference: chr 2
allele count: 88
allele frequency: 9.66353333919002e-4
allele num: 91064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-26T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-26T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9179
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11492
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5021
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5242
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9382
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5567
  bin: 2.5e0
  variant carriers: 4
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

2-202073770-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073770
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073770
    reference: chr 2
allele count: 1
allele frequency: 9.180207472688882e-6
allele num: 108930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-23T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-23T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7047
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5609
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

2-202073775-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073775
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073775
    reference: chr 2
allele count: 1
allele frequency: 8.760863470703673e-6
allele num: 114144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-18T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-18T>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11316
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4819
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5158
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

2-202073776-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073776
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073776
    reference: chr 2
allele count: 2
allele frequency: 1.732531748644294e-5
allele num: 115438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-17T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-17T>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6752
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4981
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

2-202073778-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073778
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073778
    reference: chr 2
allele count: 1
allele frequency: 8.542919628212137e-6
allele num: 117056
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-15T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-15T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13668
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

2-202073779-TTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073779
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073777
    reference: chr 2
allele count: 58
allele frequency: 5.001465946915476e-4
allele num: 115966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-12_923-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-12_794-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-12_722-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-12_794-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-12_923-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-12_831-11delGT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-12_*9-11delGT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10201
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8243
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 19158
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5298
  bin: 3.25e1
  variant carriers: 6
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TTG
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

2-202073780-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073780
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073780
    reference: chr 2
allele count: 14
allele frequency: 1.349657765352357e-4
allele num: 103730
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-13T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-13T>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 9.75e1
  variant carriers: 13
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

2-202073780-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073780
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073779
    reference: chr 2
allele count: 1855
allele frequency: 1.788296539091873e-2
allele num: 103730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-12delG
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-12delG
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 5.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 4.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 1.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 1.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 2.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 3.75e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 3.25e1
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 4.25e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 2.75e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 5.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 3668
  bin: 4.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 1.75e1
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 5.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 9.75e1
  variant carriers: 1118
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 2.5e0
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 5.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 1.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 7.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 8.25e1
  variant carriers: 24
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: TG
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-202073781-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073781
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073781
    reference: chr 2
allele count: 38069
allele frequency: 4.601595551794996e-1
allele num: 82730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-12G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-12G>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 293
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.75e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 2.75e1
  variant carriers: 7297
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 2.25e1
  variant carriers: 5592
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 4.25e1
  variant carriers: 3824
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 2303
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 1.75e1
  variant carriers: 2873
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 5.25e1
  variant carriers: 1440
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 3.75e1
  variant carriers: 5528
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.25e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.75e1
  variant carriers: 870
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 1124
genotype depth: GenotypeDepth
  all individuals: 9801
  bin: 3.25e1
  variant carriers: 7146
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 570
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 6.25e1
  variant carriers: 586
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 1.75e1
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 6.75e1
  variant carriers: 604
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 540
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 490
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.75e1
  variant carriers: 582
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 496
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.25e1
  variant carriers: 613
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 3.75e1
  variant carriers: 563
genotype quality: GenotypeQuality
  all individuals: 11490
  bin: 2.5e0
  variant carriers: 340
num of homozygotes: 12
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

2-202073781-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073781
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073781
    reference: chr 2
allele count: 10
allele frequency: 1.20875135984528e-4
allele num: 82730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-12G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-12G>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9801
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

2-202073782-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073782
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073782
    reference: chr 2
allele count: 1
allele frequency: 9.299730307821074e-6
allele num: 107530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-11T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-11T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5361
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5221
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-202073785-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073785
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073785
    reference: chr 2
allele count: 3
allele frequency: 2.515301416953132e-5
allele num: 119270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-8T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-8T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
hgvs: c.923-8T>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

2-202073786-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073786
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073786
    reference: chr 2
allele count: 1
allele frequency: 8.5966782435267e-6
allele num: 116324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-7T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-7T>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
hgvs: c.923-7T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

2-202073786-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073786
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073787
    reference: chr 2
allele count: 1
allele frequency: 8.5966782435267e-6
allele num: 116324
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-4dupA
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-4dupA
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
hgvs: c.923-4dupA
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

2-202073787-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073787
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073787
    reference: chr 2
allele count: 283
allele frequency: 2.530038621084251e-3
allele num: 111856
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-6A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-6A>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 11373
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 15981
  bin: 3.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10922
  bin: 2.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 9.75e1
  variant carriers: 209
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2695
  bin: 2.5e0
  variant carriers: 5
hgvs: c.923-6A>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

2-202073788-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073788
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073788
    reference: chr 2
allele count: 1
allele frequency: 8.380824673147837e-6
allele num: 119320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-5A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-5A>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11837
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 2.75e1
  variant carriers: 0
hgvs: c.923-5A>T
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-202073790-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
allele count: 141
allele frequency: 1.246199533338047e-3
allele num: 113144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-3C>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-3C>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 3.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16992
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 0
hgvs: c.923-3C>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

2-202073790-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
allele count: 1
allele frequency: 8.838294562681185e-6
allele num: 113144
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-3C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-3C>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4244
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9001
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 4.25e1
  variant carriers: 0
hgvs: c.923-3C>G
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

2-202073790-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073790
    reference: chr 2
allele count: 2155
allele frequency: 1.904652478257795e-2
allele num: 113144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.794-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.923-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*9-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.722-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.831-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.923-3C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.794-3C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 4.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 4.25e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 3.75e1
  variant carriers: 266
genotype depth: GenotypeDepth
  all individuals: 16992
  bin: 3.25e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 2.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 1.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 8.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 26433
  bin: 6.25e1
  variant carriers: 17
hgvs: c.923-3C>T
num of homozygotes: 207
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

2-202073794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073794
    reference: chr 2
allele count: 1
allele frequency: 8.320436656515735e-6
allele num: 120186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.924G>A
  hgvsp: ENST00000272879.5:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.924G>A
  hgvsp: ENST00000286186.6:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.723G>A
  hgvsp: ENST00000313728.7:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.832G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.795G>A
  hgvsp: ENST00000448480.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.795G>A
  hgvsp: ENST00000346817.5:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11907
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
hgvs: c.924G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum

2-202073794-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073794
    reference: chr 2
allele count: 1
allele frequency: 8.320436656515735e-6
allele num: 120186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.795G>C
  hgvsp: ENSP00000396835.1:p.Glu265Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.795G>C
  hgvsp: ENSP00000237865.7:p.Glu265Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*10G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.924G>C
  hgvsp: ENSP00000286186.6:p.Glu308Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.832G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.924G>C
  hgvsp: ENSP00000272879.5:p.Glu308Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.723G>C
  hgvsp: ENSP00000314599.7:p.Glu241Asp
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11907
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu308Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

2-202073798-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073798
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073798
    reference: chr 2
allele count: 1
allele frequency: 8.308408109006315e-6
allele num: 120360
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.928C>T
  hgvsp: ENST00000286186.6:c.928C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.727C>T
  hgvsp: ENST00000313728.7:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.928C>T
  hgvsp: ENST00000272879.5:c.928C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.836C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.799C>T
  hgvsp: ENST00000448480.1:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.799C>T
  hgvsp: ENST00000346817.5:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu310Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

2-202073800-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073800
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073800
    reference: chr 2
allele count: 13
allele frequency: 1.079644547795034e-4
allele num: 120410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.801G>T
  hgvsp: ENST00000448480.1:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.930G>T
  hgvsp: ENST00000286186.6:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.801G>T
  hgvsp: ENST00000346817.5:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.930G>T
  hgvsp: ENST00000272879.5:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.838G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.729G>T
  hgvsp: ENST00000313728.7:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*16G>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10651
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18380
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34369
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu310Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

2-202073822-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073822
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073822
    reference: chr 2
allele count: 513
allele frequency: 4.350038158229458e-3
allele num: 117930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.823G>T
  hgvsp: ENSP00000237865.7:p.Gly275Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*38G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.751G>T
  hgvsp: ENSP00000314599.7:p.Gly251Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.860G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.823G>T
  hgvsp: ENSP00000396835.1:p.Gly275Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.952G>T
  hgvsp: ENSP00000286186.6:p.Gly318Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.952G>T
  hgvsp: ENSP00000272879.5:p.Gly318Trp
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 14091
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 4.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 3.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 34033
  bin: 6.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 2699
  bin: 9.75e1
  variant carriers: 184
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 9.25e1
  variant carriers: 17
hgvs: p.Gly318Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

2-202073823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073823
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073823
    reference: chr 2
allele count: 44
allele frequency: 3.641841447466437e-4
allele num: 120818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*39G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.953G>A
  hgvsp: ENSP00000286186.6:p.Gly318Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.752G>A
  hgvsp: ENSP00000314599.7:p.Gly251Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.824G>A
  hgvsp: ENSP00000396835.1:p.Gly275Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.861G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.824G>A
  hgvsp: ENSP00000237865.7:p.Gly275Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.953G>A
  hgvsp: ENSP00000272879.5:p.Gly318Glu
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 9.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly318Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

2-202073825-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073825
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073825
    reference: chr 2
allele count: 2
allele frequency: 1.655300271469245e-5
allele num: 120824
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.955T>G
  hgvsp: ENSP00000272879.5:p.Phe319Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.955T>G
  hgvsp: ENSP00000286186.6:p.Phe319Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.863T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.826T>G
  hgvsp: ENSP00000396835.1:p.Phe276Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.754T>G
  hgvsp: ENSP00000314599.7:p.Phe252Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.826T>G
  hgvsp: ENSP00000237865.7:p.Phe276Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*41T>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18778
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12112
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe319Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

2-202073826-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073826
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073826
    reference: chr 2
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.864T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.956T>C
  hgvsp: ENSP00000272879.5:p.Phe319Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.827T>C
  hgvsp: ENSP00000237865.7:p.Phe276Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.827T>C
  hgvsp: ENSP00000396835.1:p.Phe276Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.956T>C
  hgvsp: ENSP00000286186.6:p.Phe319Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.755T>C
  hgvsp: ENSP00000314599.7:p.Phe252Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*42T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe319Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

2-202073832-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073832
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073832
    reference: chr 2
allele count: 1
allele frequency: 8.265009256810368e-6
allele num: 120992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.962T>G
  hgvsp: ENSP00000272879.5:p.Val321Gly
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.833T>G
  hgvsp: ENSP00000237865.7:p.Val278Gly
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.962T>G
  hgvsp: ENSP00000286186.6:p.Val321Gly
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.761T>G
  hgvsp: ENSP00000314599.7:p.Val254Gly
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*48T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.833T>G
  hgvsp: ENSP00000396835.1:p.Val278Gly
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.870T>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val321Gly
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum

2-202073836-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073836
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073836
    reference: chr 2
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*52T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.874T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.837T>C
  hgvsp: ENST00000346817.5:c.837T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.837T>C
  hgvsp: ENST00000448480.1:c.837T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.966T>C
  hgvsp: ENST00000286186.6:c.966T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.966T>C
  hgvsp: ENST00000272879.5:c.966T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.765T>C
  hgvsp: ENST00000313728.7:c.765T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14867
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His322His
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

2-202073843-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073843
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073843
    reference: chr 2
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.881A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.973A>G
  hgvsp: ENSP00000286186.6:p.Asn325Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.844A>G
  hgvsp: ENSP00000396835.1:p.Asn282Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.772A>G
  hgvsp: ENSP00000314599.7:p.Asn258Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*59A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.973A>G
  hgvsp: ENSP00000272879.5:p.Asn325Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.844A>G
  hgvsp: ENSP00000237865.7:p.Asn282Asp
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3050
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35863
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn325Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

2-202073844-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073844
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073844
    reference: chr 2
allele count: 4
allele frequency: 3.299676631690094e-5
allele num: 121224
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*60A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.773A>G
  hgvsp: ENSP00000314599.7:p.Asn258Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.974A>G
  hgvsp: ENSP00000272879.5:p.Asn325Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.845A>G
  hgvsp: ENSP00000396835.1:p.Asn282Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.974A>G
  hgvsp: ENSP00000286186.6:p.Asn325Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.882A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.845A>G
  hgvsp: ENSP00000237865.7:p.Asn282Ser
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn325Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

2-202073848-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073848
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073848
    reference: chr 2
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.849T>C
  hgvsp: ENST00000448480.1:c.849T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.978T>C
  hgvsp: ENST00000286186.6:c.978T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*64T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.777T>C
  hgvsp: ENST00000313728.7:c.777T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.978T>C
  hgvsp: ENST00000272879.5:c.978T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.886T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.849T>C
  hgvsp: ENST00000346817.5:c.849T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn326Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

2-202073853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073853
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073853
    reference: chr 2
allele count: 2
allele frequency: 1.649076517150396e-5
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.854C>T
  hgvsp: ENSP00000396835.1:p.Thr285Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*69C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.782C>T
  hgvsp: ENSP00000314599.7:p.Thr261Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.983C>T
  hgvsp: ENSP00000272879.5:p.Thr328Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.983C>T
  hgvsp: ENSP00000286186.6:p.Thr328Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.854C>T
  hgvsp: ENSP00000237865.7:p.Thr285Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.891C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr328Met
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

2-202073859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073859
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073859
    reference: chr 2
allele count: 10
allele frequency: 8.242664029014178e-5
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.788T>C
  hgvsp: ENSP00000314599.7:p.Val263Ala
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.860T>C
  hgvsp: ENSP00000396835.1:p.Val287Ala
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.860T>C
  hgvsp: ENSP00000237865.7:p.Val287Ala
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.989T>C
  hgvsp: ENSP00000286186.6:p.Val330Ala
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.989T>C
  hgvsp: ENSP00000272879.5:p.Val330Ala
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*75T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.897T>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10771
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35534
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val330Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

2-202073866-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073866
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073866
    reference: chr 2
allele count: 4
allele frequency: 3.298316209575012e-5
allele num: 121274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.904G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.795G>C
  hgvsp: ENSP00000314599.7:p.Met265Ile
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.996G>C
  hgvsp: ENSP00000286186.6:p.Met332Ile
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*82G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.867G>C
  hgvsp: ENSP00000237865.7:p.Met289Ile
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.996G>C
  hgvsp: ENSP00000272879.5:p.Met332Ile
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.867G>C
  hgvsp: ENSP00000396835.1:p.Met289Ile
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14684
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18690
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met332Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

2-202073869-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073869
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073869
    reference: chr 2
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*85G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.999G>C
  hgvsp: ENSP00000272879.5:p.Glu333Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.798G>C
  hgvsp: ENSP00000314599.7:p.Glu266Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.999G>C
  hgvsp: ENSP00000286186.6:p.Glu333Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.870G>C
  hgvsp: ENSP00000237865.7:p.Glu290Asp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.907G>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.870G>C
  hgvsp: ENSP00000396835.1:p.Glu290Asp
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35420
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu333Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

2-202073871-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073871
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073871
    reference: chr 2
allele count: 2
allele frequency: 1.649130908011478e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1001T>A
  hgvsp: ENSP00000286186.6:p.Met334Lys
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.872T>A
  hgvsp: ENSP00000237865.7:p.Met291Lys
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.872T>A
  hgvsp: ENSP00000396835.1:p.Met291Lys
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.909T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.800T>A
  hgvsp: ENSP00000314599.7:p.Met267Lys
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1001T>A
  hgvsp: ENSP00000272879.5:p.Met334Lys
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*87T>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met334Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

2-202073876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073876
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073876
    reference: chr 2
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.914C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.877C>T
  hgvsp: ENST00000346817.5:c.877C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.805C>T
  hgvsp: ENST00000313728.7:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1006C>T
  hgvsp: ENST00000272879.5:c.1006C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.877C>T
  hgvsp: ENST00000448480.1:c.877C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1006C>T
  hgvsp: ENST00000286186.6:c.1006C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*92C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu336Leu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

2-202073884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073884
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073884
    reference: chr 2
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1014G>A
  hgvsp: ENST00000272879.5:c.1014G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*100G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.813G>A
  hgvsp: ENST00000313728.7:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.885G>A
  hgvsp: ENST00000346817.5:c.885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1014G>A
  hgvsp: ENST00000286186.6:c.1014G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.922G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.885G>A
  hgvsp: ENST00000448480.1:c.885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys338Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

2-202073885-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073885
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073885
    reference: chr 2
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.886C>G
  hgvsp: ENSP00000237865.7:p.Gln296Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.886C>G
  hgvsp: ENSP00000396835.1:p.Gln296Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*101C>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1015C>G
  hgvsp: ENSP00000272879.5:p.Gln339Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1015C>G
  hgvsp: ENSP00000286186.6:p.Gln339Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.814C>G
  hgvsp: ENSP00000314599.7:p.Gln272Glu
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.923C>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln339Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

2-202073885-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073885
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073885
    reference: chr 2
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1015C>T
  hgvsp: ENSP00000286186.6:p.Gln339Ter
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.814C>T
  hgvsp: ENSP00000314599.7:p.Gln272Ter
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1015C>T
  hgvsp: ENSP00000272879.5:p.Gln339Ter
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.886C>T
  hgvsp: ENSP00000396835.1:p.Gln296Ter
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.886C>T
  hgvsp: ENSP00000237865.7:p.Gln296Ter
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.923C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*101C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12026
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln339Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

2-202073893-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073893
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073893
    reference: chr 2
allele count: 15
allele frequency: 1.236705416769726e-4
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1023C>T
  hgvsp: ENST00000286186.6:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.931C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.894C>T
  hgvsp: ENST00000448480.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.894C>T
  hgvsp: ENST00000346817.5:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.822C>T
  hgvsp: ENST00000313728.7:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1023C>T
  hgvsp: ENST00000272879.5:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*109C>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys341Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

http://identifiers.org/exac.variant/2-202073894-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073894
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073894
    reference: chr 2
allele count: 2
allele frequency: 1.648478454386601e-5
allele num: 121324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.932A>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.823A>C
  hgvsp: ENSP00000314599.7:p.Asn275His
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1024A>C
  hgvsp: ENSP00000286186.6:p.Asn342His
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.895A>C
  hgvsp: ENSP00000396835.1:p.Asn299His
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1024A>C
  hgvsp: ENSP00000272879.5:p.Asn342His
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.895A>C
  hgvsp: ENSP00000237865.7:p.Asn299His
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*110A>C
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12052
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn342His
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

2-202073908-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073908
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073908
    reference: chr 2
allele count: 4
allele frequency: 3.296522169111587e-5
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1038C>T
  hgvsp: ENST00000272879.5:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.837C>T
  hgvsp: ENST00000313728.7:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.946C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.909C>T
  hgvsp: ENST00000346817.5:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*124C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.909C>T
  hgvsp: ENST00000448480.1:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1038C>T
  hgvsp: ENST00000286186.6:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14807
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35843
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala346Ala
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

2-202073914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073914
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073914
    reference: chr 2
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1044G>A
  hgvsp: ENST00000286186.6:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.915G>A
  hgvsp: ENST00000346817.5:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1044G>A
  hgvsp: ENST00000272879.5:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.843G>A
  hgvsp: ENST00000313728.7:c.843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.915G>A
  hgvsp: ENST00000448480.1:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*130G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.952G>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12080
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly348Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-202073915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073915
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073915
    reference: chr 2
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.916G>A
  hgvsp: ENSP00000396835.1:p.Asp306Asn
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*131G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.844G>A
  hgvsp: ENSP00000314599.7:p.Asp282Asn
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1045G>A
  hgvsp: ENSP00000286186.6:p.Asp349Asn
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.916G>A
  hgvsp: ENSP00000237865.7:p.Asp306Asn
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1045G>A
  hgvsp: ENSP00000272879.5:p.Asp349Asn
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.953G>A
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12083
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36017
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp349Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

2-202073918-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073918
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073918
    reference: chr 2
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.919T>A
  hgvsp: ENSP00000237865.7:p.Cys307Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*134T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.956T>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1048T>A
  hgvsp: ENSP00000272879.5:p.Cys350Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1048T>A
  hgvsp: ENSP00000286186.6:p.Cys350Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.919T>A
  hgvsp: ENSP00000396835.1:p.Cys307Ser
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.847T>A
  hgvsp: ENSP00000314599.7:p.Cys283Ser
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys350Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

2-202073919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073919
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073919
    reference: chr 2
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.920G>A
  hgvsp: ENSP00000237865.7:p.Cys307Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1049G>A
  hgvsp: ENSP00000272879.5:p.Cys350Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.957G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1049G>A
  hgvsp: ENSP00000286186.6:p.Cys350Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*135G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.920G>A
  hgvsp: ENSP00000396835.1:p.Cys307Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.848G>A
  hgvsp: ENSP00000314599.7:p.Cys283Tyr
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys350Tyr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-202073923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073923
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073923
    reference: chr 2
allele count: 7
allele frequency: 5.768153202149049e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1053C>T
  hgvsp: ENST00000286186.6:c.1053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.961C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1053C>T
  hgvsp: ENST00000272879.5:c.1053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.924C>T
  hgvsp: ENST00000346817.5:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*139C>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.852C>T
  hgvsp: ENST00000313728.7:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.924C>T
  hgvsp: ENST00000448480.1:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36131
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe351Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-202073924-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073924
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073924
    reference: chr 2
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.925G>A
  hgvsp: ENSP00000237865.7:p.Val309Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.853G>A
  hgvsp: ENSP00000314599.7:p.Val285Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.962G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1054G>A
  hgvsp: ENSP00000272879.5:p.Val352Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1054G>A
  hgvsp: ENSP00000286186.6:p.Val352Met
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*140G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.925G>A
  hgvsp: ENSP00000396835.1:p.Val309Met
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val352Met
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

2-202073931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073931
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073931
    reference: chr 2
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*147G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1061G>A
  hgvsp: ENSP00000286186.6:p.Cys354Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1061G>A
  hgvsp: ENSP00000272879.5:p.Cys354Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.860G>A
  hgvsp: ENSP00000314599.7:p.Cys287Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.932G>A
  hgvsp: ENSP00000396835.1:p.Cys311Tyr
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.969G>A
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.932G>A
  hgvsp: ENSP00000237865.7:p.Cys311Tyr
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12128
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys354Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

2-202073932-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073932
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073932
    reference: chr 2
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.861T>G
  hgvsp: ENSP00000314599.7:p.Cys287Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.933T>G
  hgvsp: ENSP00000237865.7:p.Cys311Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*148T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.933T>G
  hgvsp: ENSP00000396835.1:p.Cys311Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1062T>G
  hgvsp: ENSP00000272879.5:p.Cys354Trp
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.970T>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1062T>G
  hgvsp: ENSP00000286186.6:p.Cys354Trp
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys354Trp
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

2-202073933-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073933
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073933
    reference: chr 2
allele count: 3
allele frequency: 2.471902705909495e-5
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1063A>G
  hgvsp: ENSP00000286186.6:p.Ile355Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*149A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.934A>G
  hgvsp: ENSP00000396835.1:p.Ile312Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.971A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.862A>G
  hgvsp: ENSP00000314599.7:p.Ile288Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.934A>G
  hgvsp: ENSP00000237865.7:p.Ile312Val
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1063A>G
  hgvsp: ENSP00000272879.5:p.Ile355Val
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12127
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile355Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-202073938-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073938
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073938
    reference: chr 2
allele count: 184
allele frequency: 1.51605035923802e-3
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.939G>T
  hgvsp: ENST00000346817.5:c.939G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1068G>T
  hgvsp: ENST00000286186.6:c.1068G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.939G>T
  hgvsp: ENST00000448480.1:c.939G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1068G>T
  hgvsp: ENST00000272879.5:c.1068G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*154G>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.867G>T
  hgvsp: ENST00000313728.7:c.867G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.976G>T
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14944
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu356Leu
num of homozygotes: 1
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

2-202073943-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073943
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073943
    reference: chr 2
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.944A>G
  hgvsp: ENSP00000396835.1:p.His315Arg
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1073A>G
  hgvsp: ENSP00000286186.6:p.His358Arg
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.872A>G
  hgvsp: ENSP00000314599.7:p.His291Arg
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.944A>G
  hgvsp: ENSP00000237865.7:p.His315Arg
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1073A>G
  hgvsp: ENSP00000272879.5:p.His358Arg
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*159A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.981A>G
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His358Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-202073944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073944
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073944
    reference: chr 2
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1074T>C
  hgvsp: ENST00000272879.5:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.982T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.945T>C
  hgvsp: ENST00000448480.1:c.945T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*160T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.873T>C
  hgvsp: ENST00000313728.7:c.873T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.945T>C
  hgvsp: ENST00000346817.5:c.945T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1074T>C
  hgvsp: ENST00000286186.6:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12133
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His358His
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-202073956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073956
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073956
    reference: chr 2
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1086A>G
  hgvsp: ENST00000272879.5:c.1086A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.885A>G
  hgvsp: ENST00000313728.7:c.885A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.957A>G
  hgvsp: ENST00000448480.1:c.957A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1086A>G
  hgvsp: ENST00000286186.6:c.1086A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*172A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.994A>G
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.957A>G
  hgvsp: ENST00000346817.5:c.957A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly362Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-202073959-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073959
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073959
    reference: chr 2
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.997T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1089T>C
  hgvsp: ENST00000286186.6:c.1089T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*175T>C
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.888T>C
  hgvsp: ENST00000313728.7:c.888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1089T>C
  hgvsp: ENST00000272879.5:c.1089T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.960T>C
  hgvsp: ENST00000448480.1:c.960T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.960T>C
  hgvsp: ENST00000346817.5:c.960T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala363Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

2-202073962-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073962
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073961
    reference: chr 2
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.964delT
  hgvsp: ENSP00000396835.1:p.Tyr322ThrfsTer53
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.964delT
  hgvsp: ENSP00000237865.7:p.Tyr322ThrfsTer53
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*179delT
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1093delT
  hgvsp: ENSP00000272879.5:p.Tyr365ThrfsTer53
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.892delT
  hgvsp: ENSP00000314599.7:p.Tyr298ThrfsTer53
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1093delT
  hgvsp: ENSP00000286186.6:p.Tyr365ThrfsTer53
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.1001delT
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12135
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr365ThrfsTer53
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: CT
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum

2-202073964-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202073964
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 202073964
    reference: chr 2
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000237865
  ensembl transcript: ENST00000346817
  gene symbol: CASP10
  hgvsc: ENST00000346817.5:c.965A>T
  hgvsp: ENSP00000237865.7:p.Tyr322Phe
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000353250
  ensembl transcript: ENST00000360132
  gene symbol: CASP10
  hgvsc: ENST00000360132.3:c.*180A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000003400
  ensembl transcript: ENST00000492363
  gene symbol: CASP10
  hgvsc: ENST00000492363.1:n.1002A>T
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000314599
  ensembl transcript: ENST00000313728
  gene symbol: CASP10
  hgvsc: ENST00000313728.7:c.893A>T
  hgvsp: ENSP00000314599.7:p.Tyr298Phe
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000286186
  ensembl transcript: ENST00000286186
  gene symbol: CASP10
  hgvsc: ENST00000286186.6:c.1094A>T
  hgvsp: ENSP00000286186.6:p.Tyr365Phe
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000272879
  ensembl transcript: ENST00000272879
  gene symbol: CASP10
  hgvsc: ENST00000272879.5:c.1094A>T
  hgvsp: ENSP00000272879.5:p.Tyr365Phe
  variant of: http://identifiers.org/hgnc/1500
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000003400
  ensembl protein: ENSP00000396835
  ensembl transcript: ENST00000448480
  gene symbol: CASP10
  hgvsc: ENST00000448480.1:c.965A>T
  hgvsp: ENSP00000396835.1:p.Tyr322Phe
  variant of: http://identifiers.org/hgnc/1500
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr365Phe
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3766
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5708
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.076630778974034e-3
allele num: 15790
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

QD
type: SiteQuality
SIO_000300: 1.471e1

DP
type: SiteQuality
SIO_000300: 1.265696e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 5.465e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.066e0

GenotypeQuality
all individuals: 2558
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3339
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4900
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59312
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.304375236414071e-5
allele num: 15862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
SIO_000300: 1.832e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

MQ
type: SiteQuality
SIO_000300: 5.777e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.201e0

VQSLOD
type: SiteQuality
SIO_000300: -1.885e0

DP
type: SiteQuality
SIO_000300: 1.275695e6

GenotypeQuality
all individuals: 9428
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4386
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1674
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4492
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 940
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1687
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5767
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1162
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4301
bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 2
allele frequency: 2.346866932644919e-4
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10444
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.049229992426155e-4
allele num: 15844
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.327668613913967e-4
allele num: 7532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.355254328278084e-5
allele num: 59608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.021e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

QD
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

FS
type: SiteQuality
SIO_000300: 1.4929e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQ
type: SiteQuality
SIO_000300: 5.26e1

DP
type: SiteQuality
SIO_000300: 1.353074e6

GenotypeQuality
all individuals: 1129
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1588
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.724732666436702e-5
allele num: 57980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15456
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.377e0

QD
type: SiteQuality
SIO_000300: 2.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

MQ
type: SiteQuality
SIO_000300: 5.607e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.384452e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeQuality
all individuals: 612
bin: 7.25e1
variant carriers: 137

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 98

GenotypeQuality
all individuals: 980
bin: 5.25e1
variant carriers: 191

GenotypeQuality
all individuals: 4308
bin: 9.75e1
variant carriers: 2400

GenotypeQuality
all individuals: 1534
bin: 1.75e1
variant carriers: 285

GenotypeQuality
all individuals: 1289
bin: 3.75e1
variant carriers: 253

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 207

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 107

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 98

GenotypeQuality
all individuals: 819
bin: 5.75e1
variant carriers: 173

European (Non-Finnish)
type: Population
allele count: 3333
allele frequency: 1.444733420026008e-1
allele num: 23070
num of homozygotes: 8

Latino
type: Population
allele count: 406
allele frequency: 1.501479289940828e-1
allele num: 2704
num of homozygotes: 3

East Asian
type: Population
allele count: 167
allele frequency: 9.0465872156013e-2
allele num: 1846
num of homozygotes: 0

South Asian
type: Population
allele count: 371
allele frequency: 9.973118279569892e-2
allele num: 3720
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 294
allele frequency: 1.402671755725191e-1
allele num: 2096
num of homozygotes: 1

African
type: Population
allele count: 207
allele frequency: 7.237762237762238e-2
allele num: 2860
num of homozygotes: 0

Other
type: Population
allele count: 45
allele frequency: 1.666666666666667e-1
allele num: 270
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

QD
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.524211e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 612
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 980
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 935
bin: 6.25e1
variant carriers: 9

GenotypeQuality
all individuals: 819
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1289
bin: 3.75e1
variant carriers: 16

GenotypeQuality
all individuals: 575
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 4308
bin: 9.75e1
variant carriers: 216

GenotypeQuality
all individuals: 785
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1027
bin: 4.75e1
variant carriers: 9

European (Non-Finnish)
type: Population
allele count: 230
allele frequency: 9.969657563935847e-3
allele num: 23070
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 2.222222222222222e-2
allele num: 270
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 2.097902097902098e-3
allele num: 2860
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 5.417118093174431e-3
allele num: 1846
num of homozygotes: 0

South Asian
type: Population
allele count: 47
allele frequency: 1.263440860215054e-2
allele num: 3720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 18
allele frequency: 8.587786259541985e-3
allele num: 2096
num of homozygotes: 0

Latino
type: Population
allele count: 45
allele frequency: 1.664201183431953e-2
allele num: 2704
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

DP
type: SiteQuality
SIO_000300: 1.524211e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 1027
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 819
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2306
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 935
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1550
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 1.344086021505376e-3
allele num: 3720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 9.541984732824427e-4
allele num: 2096
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 1.748251748251748e-3
allele num: 2860
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.703703703703704e-3
allele num: 270
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 2.166847237269772e-3
allele num: 1846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 1.733853489380147e-3
allele num: 23070
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 4.807692307692308e-3
allele num: 2704
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.524e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.42e0

DP
type: SiteQuality
SIO_000300: 1.524211e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 1289
bin: 3.75e1
variant carriers: 532

GenotypeQuality
all individuals: 2331
bin: 7.5e0
variant carriers: 450

GenotypeQuality
all individuals: 1735
bin: 1.25e1
variant carriers: 462

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 285

GenotypeQuality
all individuals: 612
bin: 7.25e1
variant carriers: 325

GenotypeQuality
all individuals: 34312
bin: 2.5e0
variant carriers: 378

GenotypeQuality
all individuals: 1598
bin: 2.75e1
variant carriers: 539

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 240

GenotypeQuality
all individuals: 785
bin: 6.75e1
variant carriers: 429

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 255

African
type: Population
allele count: 568
allele frequency: 1.986013986013986e-1
allele num: 2860
num of homozygotes: 0

Latino
type: Population
allele count: 340
allele frequency: 1.257396449704142e-1
allele num: 2704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5376
allele frequency: 2.330299089726918e-1
allele num: 23070
num of homozygotes: 0

East Asian
type: Population
allele count: 354
allele frequency: 1.917659804983749e-1
allele num: 1846
num of homozygotes: 0

Other
type: Population
allele count: 50
allele frequency: 1.851851851851852e-1
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 443
allele frequency: 1.190860215053763e-1
allele num: 3720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 465
allele frequency: 2.218511450381679e-1
allele num: 2096
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 3.42e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.524211e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

GenotypeQuality
all individuals: 935
bin: 6.25e1
variant carriers: 81

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 44

GenotypeQuality
all individuals: 785
bin: 6.75e1
variant carriers: 63

GenotypeQuality
all individuals: 34312
bin: 2.5e0
variant carriers: 80

GenotypeQuality
all individuals: 819
bin: 5.75e1
variant carriers: 64

GenotypeQuality
all individuals: 575
bin: 7.75e1
variant carriers: 49

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 32

GenotypeQuality
all individuals: 4308
bin: 9.75e1
variant carriers: 186

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 82

GenotypeQuality
all individuals: 612
bin: 7.25e1
variant carriers: 50

Latino
type: Population
allele count: 78
allele frequency: 2.884615384615385e-2
allele num: 2704
num of homozygotes: 0

South Asian
type: Population
allele count: 140
allele frequency: 3.763440860215054e-2
allele num: 3720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 37
allele frequency: 1.765267175572519e-2
allele num: 2096
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 2.222222222222222e-2
allele num: 270
num of homozygotes: 0

African
type: Population
allele count: 147
allele frequency: 5.13986013986014e-2
allele num: 2860
num of homozygotes: 0

East Asian
type: Population
allele count: 64
allele frequency: 3.466955579631636e-2
allele num: 1846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 699
allele frequency: 3.029908972691808e-2
allele num: 23070
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.42e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

DP
type: SiteQuality
SIO_000300: 1.524211e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

East Asian
type: Population
allele count: 10
allele frequency: 5.417118093174431e-3
allele num: 1846
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 8.391608391608392e-3
allele num: 2860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 94
allele frequency: 4.074555700043347e-3
allele num: 23070
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.524211e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQ
type: SiteQuality
SIO_000300: 5.524e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.994e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 3.42e0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 920
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33192
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 1.25e1
variant carriers: 2

South Asian
type: Population
allele count: 3
allele frequency: 1.083815028901734e-3
allele num: 2768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.481389578163772e-3
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.385524372230429e-4
allele num: 1354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.94e-1

FS
type: SiteQuality
SIO_000300: 4.834e0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.405e-1

MQ
type: SiteQuality
SIO_000300: 5.569e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

DP
type: SiteQuality
SIO_000300: 1.221242e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 5524
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2996
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 141
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3543
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 915
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 1
allele frequency: 2.532928064842959e-4
allele num: 3948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.980625931445604e-4
allele num: 20130
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 2.779708130646282e-3
allele num: 2878
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.941770647653001e-4
allele num: 3366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.506311360448808e-4
allele num: 2852
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 6.259780907668231e-4
allele num: 6390
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 2.4e0

QD
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.445e-1

DP
type: SiteQuality
SIO_000300: 1.626883e6

MQ
type: SiteQuality
SIO_000300: 5.536e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 3303
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2973
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2591
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2624
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 877
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1873
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 344
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 6965
bin: 3.25e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.41196333815726e-4
allele num: 8292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.010672703751617e-4
allele num: 49472
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.444043321299639e-4
allele num: 13850
num of homozygotes: 0

African
type: Population
allele count: 79
allele frequency: 1.227089158123641e-2
allele num: 6438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.92e0

MQ
type: SiteQuality
SIO_000300: 5.58e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.157e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

FS
type: SiteQuality
SIO_000300: 7.248e0

VQSLOD
type: SiteQuality
SIO_000300: -2.237e0

DP
type: SiteQuality
SIO_000300: 1.763724e6

GenotypeQuality
all individuals: 895
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5388
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3089
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.011940902651285e-4
allele num: 9882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.549e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.199e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.57e-1

DP
type: SiteQuality
SIO_000300: 1.798794e6

VQSLOD
type: SiteQuality
SIO_000300: -5.044e0

MQ
type: SiteQuality
SIO_000300: 5.814e1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

QD
type: SiteQuality
SIO_000300: 6.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e0

GenotypeQuality
all individuals: 1942
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7156
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 688
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581427712939242e-5
allele num: 63234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e0

MQ
type: SiteQuality
SIO_000300: 5.865e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.829689e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

FS
type: SiteQuality
SIO_000300: 3.596e0

QD
type: SiteQuality
SIO_000300: 2.343e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.876e0

VQSLOD
type: SiteQuality
SIO_000300: -4.649e0

GenotypeQuality
all individuals: 4071
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1311
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13648
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.270648030495553e-4
allele num: 7870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565337173627199e-5
allele num: 63884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 5.639e1

MQRankSum
type: SiteQuality
SIO_000300: -1.139e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.849042e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.038e1

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1351
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64710
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.120700208103807e-5
allele num: 16338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

FS
type: SiteQuality
SIO_000300: 2.8309e1

DP
type: SiteQuality
SIO_000300: 1.900699e6

VQSLOD
type: SiteQuality
SIO_000300: -4.668e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.566e1

QD
type: SiteQuality
SIO_000300: 1.943e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

GenotypeQuality
all individuals: 1278
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 325
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 13141
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 772
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 897
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1008
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 6.75e1
variant carriers: 2

Latino
type: Population
allele count: 4
allele frequency: 3.597769382982551e-4
allele num: 11118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.513194269917064e-4
allele num: 7958
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.21118696322396e-3
allele num: 9082
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.55418415206122e-4
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.067484662576687e-4
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.672169444011836e-4
allele num: 64210
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 5.492e1

DP
type: SiteQuality
SIO_000300: 1.91262e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.201e0

VQSLOD
type: SiteQuality
SIO_000300: -3.204e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 2.5502e1

QD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1914
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3879
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2924
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.751313485113835e-3
allele num: 6852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.427474636687688e-5
allele num: 58352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.268e0

VQSLOD
type: SiteQuality
SIO_000300: -2.096e0

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

FS
type: SiteQuality
SIO_000300: 3.4795e1

MQ
type: SiteQuality
SIO_000300: 5.509e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 2.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

DP
type: SiteQuality
SIO_000300: 1.951009e6

GenotypeQuality
all individuals: 1914
bin: 4.25e1
variant carriers: 75

GenotypeQuality
all individuals: 8224
bin: 6.25e1
variant carriers: 30

GenotypeQuality
all individuals: 3879
bin: 2.75e1
variant carriers: 105

GenotypeQuality
all individuals: 501
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 1813
bin: 7.5e0
variant carriers: 172

GenotypeQuality
all individuals: 10387
bin: 2.25e1
variant carriers: 121

GenotypeQuality
all individuals: 1117
bin: 7.25e1
variant carriers: 31

GenotypeQuality
all individuals: 422
bin: 8.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2924
bin: 6.75e1
variant carriers: 27

GenotypeQuality
all individuals: 3513
bin: 3.75e1
variant carriers: 63

Latino
type: Population
allele count: 168
allele frequency: 1.759162303664922e-2
allele num: 9550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 909
allele frequency: 1.557787222374554e-2
allele num: 58352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 141
allele frequency: 2.530509691313711e-2
allele num: 5572
num of homozygotes: 0

African
type: Population
allele count: 119
allele frequency: 1.478995774297788e-2
allele num: 8046
num of homozygotes: 0

Other
type: Population
allele count: 17
allele frequency: 2.15736040609137e-2
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 308
allele frequency: 2.113932738503775e-2
allele num: 14570
num of homozygotes: 0

East Asian
type: Population
allele count: 193
allele frequency: 2.816695855224752e-2
allele num: 6852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

QD
type: SiteQuality
SIO_000300: 2.93e0

VQSLOD
type: SiteQuality
SIO_000300: -2.096e0

FS
type: SiteQuality
SIO_000300: 3.4795e1

DP
type: SiteQuality
SIO_000300: 1.951009e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.268e0

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.509e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

GenotypeQuality
all individuals: 828
bin: 4.75e1
variant carriers: 589

GenotypeQuality
all individuals: 673
bin: 7.25e1
variant carriers: 589

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 601

GenotypeQuality
all individuals: 29758
bin: 9.75e1
variant carriers: 29601

GenotypeQuality
all individuals: 821
bin: 4.25e1
variant carriers: 552

GenotypeQuality
all individuals: 920
bin: 2.75e1
variant carriers: 496

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 619

GenotypeQuality
all individuals: 669
bin: 9.25e1
variant carriers: 620

GenotypeQuality
all individuals: 876
bin: 3.25e1
variant carriers: 547

GenotypeQuality
all individuals: 683
bin: 7.75e1
variant carriers: 602

Latino
type: Population
allele count: 4049
allele frequency: 4.924592556555583e-1
allele num: 8222
num of homozygotes: 1

East Asian
type: Population
allele count: 3016
allele frequency: 4.872374798061389e-1
allele num: 6190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2061
allele frequency: 4.60455764075067e-1
allele num: 4476
num of homozygotes: 1

Other
type: Population
allele count: 283
allele frequency: 4.716666666666667e-1
allele num: 600
num of homozygotes: 0

African
type: Population
allele count: 3178
allele frequency: 4.588507074790644e-1
allele num: 6926
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 19345
allele frequency: 4.414046456441382e-1
allele num: 43826
num of homozygotes: 7

South Asian
type: Population
allele count: 6137
allele frequency: 4.913530824659728e-1
allele num: 12490
num of homozygotes: 1

DP
type: SiteQuality
SIO_000300: 2.012856e6

QD
type: SiteQuality
SIO_000300: 5.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.005e-1

MQ
type: SiteQuality
SIO_000300: 5.485e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.581e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

FS
type: SiteQuality
SIO_000300: 5.8561e1

MQRankSum
type: SiteQuality
SIO_000300: -1.139e0

GenotypeQuality
all individuals: 740
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11490
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29758
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 669
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 1

South Asian
type: Population
allele count: 10
allele frequency: 8.006405124099279e-4
allele num: 12490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.581e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQ
type: SiteQuality
SIO_000300: 5.485e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.005e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.139e0

FS
type: SiteQuality
SIO_000300: 5.8561e1

DP
type: SiteQuality
SIO_000300: 2.012856e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

GenotypeQuality
all individuals: 2822
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.381978993919292e-4
allele num: 7236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14966
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

VQSLOD
type: SiteQuality
SIO_000300: -1.273e0

DP
type: SiteQuality
SIO_000300: 2.136034e6

FS
type: SiteQuality
SIO_000300: 8.545e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

MQ
type: SiteQuality
SIO_000300: 5.383e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 5.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 1875
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2806
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2627
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037943919555245e-5
allele num: 65834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.527e0

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 5.51e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.263e0

DP
type: SiteQuality
SIO_000300: 2.127445e6

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

GenotypeQuality
all individuals: 25664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64364
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.280618012812461e-5
allele num: 15922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.79e0

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.904e0

FS
type: SiteQuality
SIO_000300: 2.3879e1

MQ
type: SiteQuality
SIO_000300: 5.811e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.51e-1

DP
type: SiteQuality
SIO_000300: 2.136239e6

GenotypeQuality
all individuals: 2410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.280618012812461e-5
allele num: 15922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64364
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.904e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

FS
type: SiteQuality
SIO_000300: 2.3879e1

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

QD
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.51e-1

DP
type: SiteQuality
SIO_000300: 2.136239e6

GenotypeQuality
all individuals: 1591
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2372
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1013
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 8756
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 644
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 2394
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 24935
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2402
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1055
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1620
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 609
bin: 1.75e1
variant carriers: 6

Latino
type: Population
allele count: 34
allele frequency: 3.418459682284335e-3
allele num: 9946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 148
allele frequency: 2.381718699710331e-3
allele num: 62140
num of homozygotes: 0

South Asian
type: Population
allele count: 49
allele frequency: 3.227081138040042e-3
allele num: 15184
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.475247524752475e-3
allele num: 808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 2.023031434796141e-3
allele num: 6426
num of homozygotes: 0

East Asian
type: Population
allele count: 17
allele frequency: 2.076716344979233e-3
allele num: 8186
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.181976871045167e-3
allele num: 9166
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.884e0

VQSLOD
type: SiteQuality
SIO_000300: -3.537e0

FS
type: SiteQuality
SIO_000300: 1.0672e1

MQ
type: SiteQuality
SIO_000300: 5.708e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.71e-2

QD
type: SiteQuality
SIO_000300: 4.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.352e0

MQRankSum
type: SiteQuality
SIO_000300: -4.48e-1

DP
type: SiteQuality
SIO_000300: 2.124175e6

GenotypeQuality
all individuals: 718
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29116
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3154
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.819897689186806e-5
allele num: 11338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.768e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.204e0

QD
type: SiteQuality
SIO_000300: 6.55e0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.806e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

DP
type: SiteQuality
SIO_000300: 2.084521e6

GenotypeQuality
all individuals: 1296
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1020
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4244
bin: 9.75e1
variant carriers: 105

GenotypeQuality
all individuals: 9001
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 523
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 553
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1228
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 26433
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1158
bin: 4.25e1
variant carriers: 5

South Asian
type: Population
allele count: 18
allele frequency: 1.209514850154549e-3
allele num: 14882
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.212415130940834e-3
allele num: 8248
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.099517111064455e-4
allele num: 9526
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.609573672400897e-4
allele num: 10696
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.282051282051282e-3
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 64
allele frequency: 1.008445733013992e-3
allele num: 63464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 40
allele frequency: 7.209805335255948e-3
allele num: 5548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.457e-1

FS
type: SiteQuality
SIO_000300: 8.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.186e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

DP
type: SiteQuality
SIO_000300: 2.051167e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.719526945303051e-5
allele num: 14882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.457e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.186e0

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 2.051167e6

GenotypeQuality
all individuals: 1379
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 2282
bin: 7.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1020
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1623
bin: 2.25e1
variant carriers: 8

GenotypeQuality
all individuals: 9001
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 553
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1352
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 653
bin: 9.25e1
variant carriers: 21

GenotypeQuality
all individuals: 4244
bin: 9.75e1
variant carriers: 1807

GenotypeQuality
all individuals: 2377
bin: 7.25e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

Latino
type: Population
allele count: 111
allele frequency: 1.037771129394166e-2
allele num: 10696
num of homozygotes: 1

Other
type: Population
allele count: 14
allele frequency: 1.794871794871795e-2
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.254380436152779e-4
allele num: 63464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

African
type: Population
allele count: 1996
allele frequency: 2.095318076842326e-1
allele num: 9526
num of homozygotes: 206

South Asian
type: Population
allele count: 7
allele frequency: 4.703668861712136e-4
allele num: 14882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.051167e6

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.186e0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.457e-1

FS
type: SiteQuality
SIO_000300: 8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512447442451375e-5
allele num: 66118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.512e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

MQ
type: SiteQuality
SIO_000300: 5.819e1

DP
type: SiteQuality
SIO_000300: 2.024923e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.308e1

FS
type: SiteQuality
SIO_000300: 5.572e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33584
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512447442451375e-5
allele num: 66118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

FS
type: SiteQuality
SIO_000300: 5.572e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 1.308e1

DP
type: SiteQuality
SIO_000300: 2.024923e6

MQ
type: SiteQuality
SIO_000300: 5.819e1

VQSLOD
type: SiteQuality
SIO_000300: -1.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
all individuals: 12003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.851e1

DP
type: SiteQuality
SIO_000300: 2.028855e6

QD
type: SiteQuality
SIO_000300: 2.621e1

FS
type: SiteQuality
SIO_000300: 5.06e0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.844e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.801e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.813291426153707e-4
allele num: 66178
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

FS
type: SiteQuality
SIO_000300: 7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.95e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 2.030832e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 26

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2900
bin: 7.75e1
variant carriers: 17

GenotypeQuality
all individuals: 506
bin: 2.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1048
bin: 2.5e0
variant carriers: 13

GenotypeQuality
all individuals: 126
bin: 7.5e0
variant carriers: 12

GenotypeQuality
all individuals: 3155
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1460
bin: 8.25e1
variant carriers: 16

GenotypeQuality
all individuals: 11618
bin: 6.75e1
variant carriers: 25

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 26

GenotypeQuality
all individuals: 622
bin: 8.75e1
variant carriers: 17

European (Non-Finnish)
type: Population
allele count: 302
allele frequency: 4.66164485058039e-3
allele num: 64784
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.762705923589204e-4
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 124
allele frequency: 1.262729124236252e-2
allele num: 9820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.529411764705882e-3
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.30393551446183e-3
allele num: 8436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 63
allele frequency: 1.015473887814313e-2
allele num: 6204
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.56e-1

DP
type: SiteQuality
SIO_000300: 2.110188e6

MQ
type: SiteQuality
SIO_000300: 5.876e1

FS
type: SiteQuality
SIO_000300: 4.9976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.923e0

QD
type: SiteQuality
SIO_000300: 9.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.315e1

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 12133
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35467
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 44
allele frequency: 6.627104858872789e-4
allele num: 66394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

FS
type: SiteQuality
SIO_000300: 1.408e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

QD
type: SiteQuality
SIO_000300: 1.111e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.025377e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2966
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2823e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.293e0

DP
type: SiteQuality
SIO_000300: 2.025273e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.865e1

VQSLOD
type: SiteQuality
SIO_000300: -2.286e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.336e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 5.9e-1

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3308
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3072
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-1

MQ
type: SiteQuality
SIO_000300: 5.607e1

DP
type: SiteQuality
SIO_000300: 2.023372e6

VQSLOD
type: SiteQuality
SIO_000300: -1.024e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

FS
type: SiteQuality
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QD
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BaseQRankSum
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SIO_000300: 2.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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SIO_000300: 3.49e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8632
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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DP
type: SiteQuality
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
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South Asian
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allele frequency: 0.0e0
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MQRankSum
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MQ
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BaseQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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DP
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.164e1

ReadPosRankSum
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SIO_000300: -3.64e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 2.42512428761974e-4
allele num: 16494
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.997e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

QD
type: SiteQuality
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DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.768e0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e0

ClippingRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.026391e6

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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South Asian
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allele num: 16496
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East Asian
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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QD
type: SiteQuality
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.500180007200288e-5
allele num: 66664
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele num: 66664
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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African
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South Asian
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Other
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European (Finnish)
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

South Asian
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allele frequency: 1.215214485356665e-4
allele num: 16458
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -6.368e-1

QD
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ClippingRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
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DP
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SIO_000300: 2.022211e6

BaseQRankSum
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SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.000120004800192e-5
allele num: 66664
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 7.79e-1

MQ
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BaseQRankSum
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SIO_000300: -8.27e-1

ClippingRankSum
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SIO_000300: -1.292e0

DP
type: SiteQuality
SIO_000300: 2.022169e6

VQSLOD
type: SiteQuality
SIO_000300: -1.008e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.08e-1

FS
type: SiteQuality
SIO_000300: 3.48e0

QD
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ReadPosRankSum
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MQRankSum
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SIO_000300: -1.278e0

InbreedingCoeff
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SIO_000300: 2.48e-2

ClippingRankSum
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SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 2.022011e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.752e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.767e0

FS
type: SiteQuality
SIO_000300: 5.471e0

InbreedingCoeff
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SIO_000300: 1.71e-2

MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 2.022301e6

QD
type: SiteQuality
SIO_000300: 1.216e1

MQ
type: SiteQuality
SIO_000300: 5.935e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

QD
type: SiteQuality
SIO_000300: 1.216e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.767e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 5.471e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 2.022301e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 15
allele frequency: 1.733302519066328e-3
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.893e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

BaseQRankSum
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SIO_000300: -3.89e0

VQSLOD
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66676
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Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 1.212856276531231e-4
allele num: 16490
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 1.213297743266198e-4
allele num: 16484
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East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Latino
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allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
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DP
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MQRankSum
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FS
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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African
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Latino
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South Asian
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Other
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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East Asian
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African
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European (Finnish)
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
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SIO_000300: -9.55e-1

QD
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SIO_000300: 1.313e1

ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
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MQ
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SIO_000300: 5.899e1

VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.819284414796847e-4
allele num: 16490
num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.497211728728189e-5
allele num: 66708
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

QD
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SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.61e-1

DP
type: SiteQuality
SIO_000300: 2.029396e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.898e1

DP
type: SiteQuality
SIO_000300: 2.028595e6

QD
type: SiteQuality
SIO_000300: 5.88e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

FS
type: SiteQuality
SIO_000300: 1.4902e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.263e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -1.539e0

ReadPosRankSum
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SIO_000300: -1.503e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.184e0

DP
type: SiteQuality
SIO_000300: 2.029155e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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SIO_000300: 5.885e1

ClippingRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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Latino
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South Asian
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allele frequency: 1.818622696411251e-4
allele num: 16496
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QD
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MQRankSum
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MQ
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FS
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 11
allele frequency: 9.500777336327518e-4
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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Other
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African
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allele count: 162
allele frequency: 1.55679415721699e-2
allele num: 10406
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European (Non-Finnish)
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allele count: 10
allele frequency: 1.49907057624273e-4
allele num: 66708
num of homozygotes: 0

FS
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MQ
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SIO_000300: 5.916e1

VQSLOD
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ReadPosRankSum
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QD
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DP
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.66e-2

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele num: 908
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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SIO_000300: 2.029742e6

BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 2.029848e6

MQRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.191e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

FS
type: SiteQuality
SIO_000300: 4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 36364
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.030174e6

QD
type: SiteQuality
SIO_000300: 1.157e1

FS
type: SiteQuality
SIO_000300: 9.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
all individuals: 3255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2908
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.687e0

DP
type: SiteQuality
SIO_000300: 2.030109e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 8.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.162e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.475e0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3055
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.92e-1

FS
type: SiteQuality
SIO_000300: 5.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.068e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

DP
type: SiteQuality
SIO_000300: 2.03062e6

QD
type: SiteQuality
SIO_000300: 1.584e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1