http://identifiers.org/exac.variant/1-110212204-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212204
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212204
    reference: chr 1
allele count: 1
allele frequency: 1.02942084783101e-5
allele num: 97142
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.36C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.426C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-54C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+11C>A
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9875
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-110212205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212205
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212205
    reference: chr 1
allele count: 1
allele frequency: 1.030587847308105e-5
allele num: 97032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.427C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.37C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-53C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+12C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+12C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-110212206-A-ACCCCACTCCCAGTCTCCCCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212206
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212227
    reference: chr 1
allele count: 54
allele frequency: 5.622305978385357e-4
allele num: 96046
alternate allele: ACCCCACTCCCAGTCTCCCCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21428
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9726
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11205
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3991
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

1-110212209-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212209
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212209
    reference: chr 1
allele count: 1
allele frequency: 1.062202583276682e-5
allele num: 94144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.431C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-49C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.41C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+16C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/1-110212210-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212210
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212210
    reference: chr 1
allele count: 1
allele frequency: 1.077307592863915e-5
allele num: 92824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.42C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-48C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.432C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+17C>A
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 24265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3149
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

1-110212210-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212210
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212210
    reference: chr 1
allele count: 1
allele frequency: 1.077307592863915e-5
allele num: 92824
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-48C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.42C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+17C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.432C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+17C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-110212210-CACTCCCAGTCTCCCCTTCCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212210
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212189
    reference: chr 1
allele count: 39
allele frequency: 4.201499612169267e-4
allele num: 92824
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24265
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: CACTCCCAGTCTCCCCTTCCCT
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

1-110212211-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212211
    reference: chr 1
allele count: 1
allele frequency: 1.090369853454292e-5
allele num: 91712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-47A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.43A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.433A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+18A>T
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24396
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-110212215-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212215
    reference: chr 1
allele count: 220
allele frequency: 2.468747895953498e-3
allele num: 89114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.437C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-43C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.47C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+22C>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+22C>A
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 2.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 25347
  bin: 1.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 13580
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 1.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 3
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

1-110212228-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212228
    reference: chr 1
allele count: 1
allele frequency: 1.289457396327625e-5
allele num: 77552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.60C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-30C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+35C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.450C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+35C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-110212231-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110212231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110212231
    reference: chr 1
allele count: 4
allele frequency: 5.485463521667581e-5
allele num: 72920
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.63T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.354+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000464206
  gene symbol: GSTM2
  hgvsc: ENST00000464206.1:n.322-27T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000476040
  gene symbol: GSTM2
  hgvsc: ENST00000476040.2:n.453T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.360+38T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.48+38T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23563
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18151
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7352
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

1-110213859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213859
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213859
    reference: chr 1
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.579T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-77T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

1-110213863-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213863
    reference: chr 1
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.583C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-73C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-46C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-46C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8669
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

1-110213863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213863
    reference: chr 1
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.583C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-73C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-110213886-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213886
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213886
    reference: chr 1
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.606T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-50T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-23T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5718
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4534
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-110213887-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213887
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213887
    reference: chr 1
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.607T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-49T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-22T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-22T>G
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

1-110213890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213890
    reference: chr 1
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.610C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-46C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361-19C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361-19C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

1-110213909-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213909
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213909
    reference: chr 1
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.361G>A
  hgvsp: ENSP00000435910.2:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.49G>A
  hgvsp: ENSP00000404662.2:p.Glu17Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.355G>A
  hgvsp: ENSP00000358842.3:p.Glu119Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.361G>A
  hgvsp: ENSP00000358844.2:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.361G>A
  hgvsp: ENSP00000241337.4:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.578G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.361G>A
  hgvsp: ENSP00000358846.2:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.361G>A
  hgvsp: ENSP00000416883.1:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.629G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-27G>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu121Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-110213917-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213917
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213917
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.57G>T
  hgvsp: ENST00000414179.2:c.57G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.637G>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.369G>T
  hgvsp: ENST00000442650.1:c.369G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.363G>T
  hgvsp: ENST00000369827.3:c.363G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.586G>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-19G>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.369G>T
  hgvsp: ENST00000241337.4:c.369G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.369G>T
  hgvsp: ENST00000460717.3:c.369G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.369G>T
  hgvsp: ENST00000369831.2:c.369G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.369G>T
  hgvsp: ENST00000369829.2:c.369G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu123Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-110213918-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213918
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213918
    reference: chr 1
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.638A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.370A>C
  hgvsp: ENSP00000435910.2:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.370A>C
  hgvsp: ENSP00000358844.2:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.370A>C
  hgvsp: ENSP00000416883.1:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.370A>C
  hgvsp: ENSP00000358846.2:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.587A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.370A>C
  hgvsp: ENSP00000241337.4:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.58A>C
  hgvsp: ENSP00000404662.2:p.Lys20Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.364A>C
  hgvsp: ENSP00000358842.3:p.Lys122Gln
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-18A>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys124Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-110213925-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213925
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213925
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.594A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.377A>C
  hgvsp: ENSP00000358846.2:p.Glu126Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.377A>C
  hgvsp: ENSP00000416883.1:p.Glu126Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.361-11A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.371A>C
  hgvsp: ENSP00000358842.3:p.Glu124Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.645A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.65A>C
  hgvsp: ENSP00000404662.2:p.Glu22Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.377A>C
  hgvsp: ENSP00000358844.2:p.Glu126Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.377A>C
  hgvsp: ENSP00000435910.2:p.Glu126Ala
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.377A>C
  hgvsp: ENSP00000241337.4:p.Glu126Ala
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu126Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

1-110213939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213939
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213939
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.391C>T
  hgvsp: ENSP00000241337.4:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.79C>T
  hgvsp: ENSP00000404662.2:p.Leu27Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.659C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.391C>T
  hgvsp: ENSP00000358846.2:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.608C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.364C>T
  hgvsp: ENSP00000435157.2:p.Leu122Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.385C>T
  hgvsp: ENSP00000358842.3:p.Leu129Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.391C>T
  hgvsp: ENSP00000358844.2:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.391C>T
  hgvsp: ENSP00000435910.2:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.391C>T
  hgvsp: ENSP00000416883.1:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5741
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3965
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu131Phe
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-110213943-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213943
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213943
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.395C>G
  hgvsp: ENSP00000416883.1:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.368C>G
  hgvsp: ENSP00000435157.2:p.Pro123Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.395C>G
  hgvsp: ENSP00000241337.4:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.395C>G
  hgvsp: ENSP00000358846.2:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.83C>G
  hgvsp: ENSP00000404662.2:p.Pro28Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.395C>G
  hgvsp: ENSP00000358844.2:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.612C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.395C>G
  hgvsp: ENSP00000435910.2:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.663C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.389C>G
  hgvsp: ENSP00000358842.3:p.Pro130Arg
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro132Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-110213956-G-GCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213956
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213958
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: GCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.384_385dupCT
  hgvsp: ENSP00000435157.2:p.Tyr129SerfsTer?
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.411_412dupCT
  hgvsp: ENSP00000358844.2:p.Tyr138SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.679_680dupCT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.411_412dupCT
  hgvsp: ENSP00000358846.2:p.Tyr138SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.411_412dupCT
  hgvsp: ENSP00000435910.2:p.Tyr138SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.99_100dupCT
  hgvsp: ENSP00000404662.2:p.Tyr34SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.411_412dupCT
  hgvsp: ENSP00000241337.4:p.Tyr138SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.405_406dupCT
  hgvsp: ENSP00000358842.3:p.Tyr136SerfsTer25
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.411_412dupCT
  hgvsp: ENSP00000416883.1:p.Tyr138SerfsTer45
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.628_629dupCT
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8936
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr138SerfsTer45
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

1-110213961-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213961
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213961
    reference: chr 1
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.386A>G
  hgvsp: ENSP00000435157.2:p.Tyr129Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.413A>G
  hgvsp: ENSP00000358844.2:p.Tyr138Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.681A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.413A>G
  hgvsp: ENSP00000416883.1:p.Tyr138Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.413A>G
  hgvsp: ENSP00000358846.2:p.Tyr138Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.101A>G
  hgvsp: ENSP00000404662.2:p.Tyr34Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.630A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.407A>G
  hgvsp: ENSP00000358842.3:p.Tyr136Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.413A>G
  hgvsp: ENSP00000435910.2:p.Tyr138Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.413A>G
  hgvsp: ENSP00000241337.4:p.Tyr138Cys
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr138Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-110213976-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213976
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213976
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.422G>A
  hgvsp: ENSP00000358842.3:p.Gly141Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.428G>A
  hgvsp: ENSP00000358844.2:p.Gly143Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.428G>A
  hgvsp: ENSP00000416883.1:p.Gly143Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.696G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.116G>A
  hgvsp: ENSP00000404662.2:p.Gly39Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.401G>A
  hgvsp: ENSP00000435157.2:p.Gly134Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.428G>A
  hgvsp: ENSP00000435910.2:p.Gly143Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.428G>A
  hgvsp: ENSP00000358846.2:p.Gly143Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.645G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.428G>A
  hgvsp: ENSP00000241337.4:p.Gly143Glu
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15705
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly143Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-110213981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213981
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213981
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.701C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.427C>T
  hgvsp: ENSP00000358842.3:p.Gln143Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.406C>T
  hgvsp: ENSP00000435157.2:p.Gln136Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.650C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.433C>T
  hgvsp: ENSP00000416883.1:p.Gln145Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.121C>T
  hgvsp: ENSP00000404662.2:p.Gln41Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.433C>T
  hgvsp: ENSP00000435910.2:p.Gln145Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.433C>T
  hgvsp: ENSP00000241337.4:p.Gln145Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.433C>T
  hgvsp: ENSP00000358844.2:p.Gln145Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.433C>T
  hgvsp: ENSP00000358846.2:p.Gln145Ter
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln145Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-110213987-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213987
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213987
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.433T>C
  hgvsp: ENSP00000358842.3:p.Trp145Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.656T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.439T>C
  hgvsp: ENSP00000358846.2:p.Trp147Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.707T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.439T>C
  hgvsp: ENSP00000358844.2:p.Trp147Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.439T>C
  hgvsp: ENSP00000435910.2:p.Trp147Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.439T>C
  hgvsp: ENSP00000416883.1:p.Trp147Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.439T>C
  hgvsp: ENSP00000241337.4:p.Trp147Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.127T>C
  hgvsp: ENSP00000404662.2:p.Trp43Arg
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.412T>C
  hgvsp: ENSP00000435157.2:p.Trp138Arg
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp147Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

1-110213999-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110213999
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110213999
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.451G>C
  hgvsp: ENSP00000358844.2:p.Asp151His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.445G>C
  hgvsp: ENSP00000358842.3:p.Asp149His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.719G>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.139G>C
  hgvsp: ENSP00000404662.2:p.Asp47His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.451G>C
  hgvsp: ENSP00000241337.4:p.Asp151His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.451G>C
  hgvsp: ENSP00000358846.2:p.Asp151His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.451G>C
  hgvsp: ENSP00000435910.2:p.Asp151His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.451G>C
  hgvsp: ENSP00000416883.1:p.Asp151His
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.668G>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.424G>C
  hgvsp: ENSP00000435157.2:p.Asp142His
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12840
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp151His
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-110214015-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214015
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214015
    reference: chr 1
allele count: 18
allele frequency: 1.482701812191104e-4
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+11C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+11C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16188
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 5718
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

1-110214016-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214016
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214016
    reference: chr 1
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+12G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+12G>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

1-110214019-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214019
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214019
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+15T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+15T>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15102
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

1-110214021-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214021
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214020
    reference: chr 1
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+18delT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+18delT
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5717
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: AT
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-110214026-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214026
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214026
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+22G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+22G>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15067
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-110214027-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214027
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214027
    reference: chr 1
allele count: 61
allele frequency: 5.024960047448803e-4
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+23A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+23A>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9850
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15061
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-110214038-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214038
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214038
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+34T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+34T>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16133
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15478
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

1-110214039-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214039
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214039
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+35T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+35T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-110214043-ATAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214043
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214040
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+41_724+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+41_450+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+41_429+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+41_456+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+41_456+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+41_144+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+41_673+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+41_456+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+41_456+43delACT
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+41_456+43delACT
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: ATAC
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-110214045-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214045
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214045
    reference: chr 1
allele count: 5
allele frequency: 4.11936265221045e-5
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.456+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.456+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.673+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.724+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.144+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.456+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.429+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.456+41A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.456+41A>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12814
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6289
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8856
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-110214056-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214056
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214056
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+52T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-39T>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-39T>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-110214057-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214057
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214057
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-38A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+53A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-38A>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15030
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

1-110214058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214058
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214058
    reference: chr 1
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+54T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-37T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-37T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-110214073-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214073
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214073
    reference: chr 1
allele count: 9
allele frequency: 7.413753336189001e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+69A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-22A>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-22A>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-110214086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214086
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214086
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-9C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+82C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16116
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

1-110214091-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214091
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.457-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.457-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.430-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.457-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.145-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.457-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+87C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.674-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.457-4C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.725-4C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 8.75e1
  variant carriers: 0
hgvs: c.457-4C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

1-110214097-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214097
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214097
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.727C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.459C>G
  hgvsp: ENSP00000358846.2:p.Ile153Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.676C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.432C>G
  hgvsp: ENSP00000435157.2:p.Ile144Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.459C>G
  hgvsp: ENSP00000416883.1:p.Ile153Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.459C>G
  hgvsp: ENSP00000358844.2:p.Ile153Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.459C>G
  hgvsp: ENSP00000241337.4:p.Ile153Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.459C>G
  hgvsp: ENSP00000435910.2:p.Ile153Met
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+93C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.147C>G
  hgvsp: ENSP00000404662.2:p.Ile49Met
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile153Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-110214103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214103
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214103
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+99T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.465T>C
  hgvsp: ENST00000460717.3:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.682T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.153T>C
  hgvsp: ENST00000414179.2:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.733T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.465T>C
  hgvsp: ENST00000369829.2:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.465T>C
  hgvsp: ENST00000241337.4:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.465T>C
  hgvsp: ENST00000442650.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.465T>C
  hgvsp: ENST00000369831.2:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435157
  ensembl transcript: ENST00000467579
  gene symbol: GSTM2
  hgvsc: ENST00000467579.3:c.438T>C
  hgvsp: ENST00000467579.3:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15908
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe155Phe
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

1-110214115-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214115
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214115
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.477C>T
  hgvsp: ENST00000369829.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.477C>T
  hgvsp: ENST00000369831.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+111C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.477C>T
  hgvsp: ENST00000442650.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.477C>T
  hgvsp: ENST00000460717.3:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.165C>T
  hgvsp: ENST00000414179.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.694C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.477C>T
  hgvsp: ENST00000241337.4:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.745C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16116
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile159Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-110214116-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214116
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214116
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+112G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.166G>A
  hgvsp: ENSP00000404662.2:p.Ala56Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.478G>A
  hgvsp: ENSP00000435910.2:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.478G>A
  hgvsp: ENSP00000358846.2:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.478G>A
  hgvsp: ENSP00000241337.4:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.746G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.478G>A
  hgvsp: ENSP00000416883.1:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.695G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.478G>A
  hgvsp: ENSP00000358844.2:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala160Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

1-110214120-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214120
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214120
    reference: chr 1
allele count: 14
allele frequency: 1.153136531365314e-4
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.482A>G
  hgvsp: ENSP00000358844.2:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.699A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.482A>G
  hgvsp: ENSP00000358846.2:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.482A>G
  hgvsp: ENSP00000435910.2:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.482A>G
  hgvsp: ENSP00000241337.4:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.170A>G
  hgvsp: ENSP00000404662.2:p.Tyr57Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.482A>G
  hgvsp: ENSP00000416883.1:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+116A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.750A>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5695
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr161Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-110214121-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214121
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214121
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.171T>C
  hgvsp: ENST00000414179.2:c.171T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.483T>C
  hgvsp: ENST00000369831.2:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.483T>C
  hgvsp: ENST00000460717.3:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.751T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.700T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.483T>C
  hgvsp: ENST00000369829.2:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.483T>C
  hgvsp: ENST00000241337.4:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+117T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.483T>C
  hgvsp: ENST00000442650.1:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr161Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-110214122-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214122
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214122
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.484G>T
  hgvsp: ENSP00000435910.2:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.484G>T
  hgvsp: ENSP00000416883.1:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.484G>T
  hgvsp: ENSP00000358844.2:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.484G>T
  hgvsp: ENSP00000358846.2:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+118G>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.172G>T
  hgvsp: ENSP00000404662.2:p.Asp58Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.484G>T
  hgvsp: ENSP00000241337.4:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.752G>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.701G>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp162Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-110214124-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214124
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214124
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+120T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.486T>C
  hgvsp: ENST00000241337.4:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.754T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.486T>C
  hgvsp: ENST00000460717.3:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.703T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.486T>C
  hgvsp: ENST00000369829.2:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.486T>C
  hgvsp: ENST00000442650.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.174T>C
  hgvsp: ENST00000414179.2:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.486T>C
  hgvsp: ENST00000369831.2:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp162Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

1-110214130-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214130
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214130
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.492T>C
  hgvsp: ENST00000442650.1:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.492T>C
  hgvsp: ENST00000241337.4:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.492T>C
  hgvsp: ENST00000369831.2:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.180T>C
  hgvsp: ENST00000414179.2:c.180T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.760T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+126T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.492T>C
  hgvsp: ENST00000460717.3:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.492T>C
  hgvsp: ENST00000369829.2:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.709T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15915
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu164Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-110214142-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214142
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214142
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.504A>G
  hgvsp: ENST00000369829.2:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.504A>G
  hgvsp: ENST00000460717.3:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.504A>G
  hgvsp: ENST00000369831.2:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.192A>G
  hgvsp: ENST00000414179.2:c.192A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.504A>G
  hgvsp: ENST00000442650.1:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+138A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.504A>G
  hgvsp: ENST00000241337.4:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.721A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.772A>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln168Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

1-110214144-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214144
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214144
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.506T>A
  hgvsp: ENSP00000358844.2:p.Val169Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.723T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.506T>A
  hgvsp: ENSP00000416883.1:p.Val169Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.506T>A
  hgvsp: ENSP00000241337.4:p.Val169Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.774T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+140T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.194T>A
  hgvsp: ENSP00000404662.2:p.Val65Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.506T>A
  hgvsp: ENSP00000358846.2:p.Val169Glu
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.506T>A
  hgvsp: ENSP00000435910.2:p.Val169Glu
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16104
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val169Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-110214155-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214155
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+151A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.517A>G
  hgvsp: ENSP00000358844.2:p.Ser173Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.734A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.517A>G
  hgvsp: ENSP00000241337.4:p.Ser173Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.205A>G
  hgvsp: ENSP00000404662.2:p.Ser69Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.517A>G
  hgvsp: ENSP00000358846.2:p.Ser173Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.517A>G
  hgvsp: ENSP00000435910.2:p.Ser173Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.517A>G
  hgvsp: ENSP00000416883.1:p.Ser173Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.785A>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15919
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser173Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-110214167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214167
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214167
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.529G>A
  hgvsp: ENSP00000435910.2:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.529G>A
  hgvsp: ENSP00000416883.1:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.217G>A
  hgvsp: ENSP00000404662.2:p.Ala73Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+163G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.797G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.529G>A
  hgvsp: ENSP00000358846.2:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.529G>A
  hgvsp: ENSP00000358844.2:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.746G>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.529G>A
  hgvsp: ENSP00000241337.4:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5697
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala177Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-110214172-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214172
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214172
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.534C>T
  hgvsp: ENST00000241337.4:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+168C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.802C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.534C>T
  hgvsp: ENST00000442650.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.222C>T
  hgvsp: ENST00000414179.2:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.534C>T
  hgvsp: ENST00000369829.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.534C>T
  hgvsp: ENST00000369831.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.534C>T
  hgvsp: ENST00000460717.3:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.751C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe178Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

1-110214195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214195
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214195
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.245C>G
  hgvsp: ENSP00000404662.2:p.Ser82Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.557C>G
  hgvsp: ENSP00000358844.2:p.Ser186Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.825C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.557C>G
  hgvsp: ENSP00000416883.1:p.Ser186Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.557C>G
  hgvsp: ENSP00000435910.2:p.Ser186Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.557C>G
  hgvsp: ENSP00000358846.2:p.Ser186Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+191C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.557C>G
  hgvsp: ENSP00000241337.4:p.Ser186Cys
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.774C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8929
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4545
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser186Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-110214196-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214196
    reference: chr 1
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.558C>G
  hgvsp: ENST00000460717.3:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.246C>G
  hgvsp: ENST00000414179.2:c.246C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.558C>G
  hgvsp: ENST00000442650.1:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.558C>G
  hgvsp: ENST00000369829.2:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.826C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.558C>G
  hgvsp: ENST00000369831.2:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.558C>G
  hgvsp: ENST00000241337.4:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+192C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.775C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser186Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-110214197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214197
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214197
    reference: chr 1
allele count: 5
allele frequency: 4.11834475487612e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.559C>T
  hgvsp: ENSP00000241337.4:p.Arg187Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.247C>T
  hgvsp: ENSP00000404662.2:p.Arg83Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.559C>T
  hgvsp: ENSP00000358846.2:p.Arg187Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.559C>T
  hgvsp: ENSP00000435910.2:p.Arg187Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.559C>T
  hgvsp: ENSP00000358844.2:p.Arg187Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.559C>T
  hgvsp: ENSP00000416883.1:p.Arg187Ter
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.827C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+193C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.776C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12993
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16103
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Arg187Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

1-110214199-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214199
    reference: chr 1
allele count: 47
allele frequency: 3.871307843104954e-4
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+195A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.561A>T
  hgvsp: ENST00000369831.2:c.561A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.249A>T
  hgvsp: ENST00000414179.2:c.249A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.561A>T
  hgvsp: ENST00000442650.1:c.561A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.561A>T
  hgvsp: ENST00000369829.2:c.561A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.829A>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.561A>T
  hgvsp: ENST00000241337.4:c.561A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.561A>T
  hgvsp: ENST00000460717.3:c.561A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.778A>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg187Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

1-110214204-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214204
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214204
    reference: chr 1
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.566A>G
  hgvsp: ENSP00000435910.2:p.Glu189Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.566A>G
  hgvsp: ENSP00000241337.4:p.Glu189Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+200A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.566A>G
  hgvsp: ENSP00000358844.2:p.Glu189Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.566A>G
  hgvsp: ENSP00000358846.2:p.Glu189Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.834A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.566A>G
  hgvsp: ENSP00000416883.1:p.Glu189Gly
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.783A>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.254A>G
  hgvsp: ENSP00000404662.2:p.Glu85Gly
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu189Gly
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-110214215-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214215
    reference: chr 1
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.567+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.567+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+211C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.255+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.567+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.784+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.835+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.567+10C>G
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.567+10C>G
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-110214223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214223
    reference: chr 1
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.567+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.567+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.567+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.835+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.567+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.567+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.255+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.784+18C>T
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+219C>T
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8857
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16072
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4539
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-110214226-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214226
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214226
    reference: chr 1
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.567+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.835+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.255+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.567+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.784+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.567+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.567+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.567+21T>A
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+222T>A
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

1-110214228-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214228
    reference: chr 1
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  hgvsc: ENST00000369829.2:c.567+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  hgvsc: ENST00000369827.3:c.450+224T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  hgvsc: ENST00000442650.1:c.567+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  hgvsc: ENST00000472225.2:n.784+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  hgvsc: ENST00000241337.4:c.567+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  hgvsc: ENST00000369831.2:c.567+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  hgvsc: ENST00000496578.3:n.835+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  hgvsc: ENST00000414179.2:c.255+23T>C
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  hgvsc: ENST00000460717.3:c.567+23T>C
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-110214232-T-TGTCTCTAAAATGGGGGAGATAATTCTACCACCCTGTAGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110214232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 110214272
    reference: chr 1
allele count: 1
allele frequency: 8.262687356435807e-6
allele num: 121026
alternate allele: TGTCTCTAAAATGGGGGAGATAATTCTACCACCCTGTAGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358842
  ensembl transcript: ENST00000369827
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000472225
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000241337
  ensembl transcript: ENST00000241337
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000416883
  ensembl transcript: ENST00000442650
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000404662
  ensembl transcript: ENST00000414179
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl transcript: ENST00000496578
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000435910
  ensembl transcript: ENST00000460717
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358846
  ensembl transcript: ENST00000369831
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213366
  ensembl protein: ENSP00000358844
  ensembl transcript: ENST00000369829
  gene symbol: GSTM2
  variant of: http://identifiers.org/hgnc/4634
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 12624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 25697
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 789
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3105
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 832
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4400
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.122082585278277e-4
allele num: 8912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13158
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 4.872e0

DP
type: SiteQuality
SIO_000300: 1.203733e6

VQSLOD
type: SiteQuality
SIO_000300: -8.82e-1

QD
type: SiteQuality
SIO_000300: 6.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.362e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

GenotypeQuality
all individuals: 299
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54128
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.448016217781639e-4
allele num: 6906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 8.33e0

VQSLOD
type: SiteQuality
SIO_000300: -9.506e-1

FS
type: SiteQuality
SIO_000300: 1.589e0

DP
type: SiteQuality
SIO_000300: 1.200624e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeQuality
all individuals: 247
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 294
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 506
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13204
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 872
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 25972
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 637
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 9.75e1
variant carriers: 63

Latino
type: Population
allele count: 3
allele frequency: 3.396739130434783e-4
allele num: 8832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.864349901189455e-5
allele num: 53638
num of homozygotes: 0

African
type: Population
allele count: 50
allele frequency: 6.099048548426446e-3
allele num: 8198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6808
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

FS
type: SiteQuality
SIO_000300: 4.478e0

VQSLOD
type: SiteQuality
SIO_000300: -6.882e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 1.194125e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

QD
type: SiteQuality
SIO_000300: 2.2e0

GenotypeQuality
all individuals: 393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28095
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4560
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3093
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.9014298752662e-5
allele num: 52592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.841e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

FS
type: SiteQuality
SIO_000300: 2.557e0

DP
type: SiteQuality
SIO_000300: 1.135562e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

QD
type: SiteQuality
SIO_000300: 1.419e1

VQSLOD
type: SiteQuality
SIO_000300: -1.556e0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28599
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4827
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.92856591838309e-5
allele num: 51852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 1.842e0

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.566e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

DP
type: SiteQuality
SIO_000300: 1.108363e6

VQSLOD
type: SiteQuality
SIO_000300: -8.550000000000001e-2

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4827
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28599
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51852
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.932730445819452e-5
allele num: 12606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 1.108363e6

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

FS
type: SiteQuality
SIO_000300: 1.842e0

VQSLOD
type: SiteQuality
SIO_000300: -8.550000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.566e1

QD
type: SiteQuality
SIO_000300: 2.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28599
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4827
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 9.75e1
variant carriers: 55

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.349996142868163e-4
allele num: 51852
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.445086705202312e-3
allele num: 692
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.370229912301493e-4
allele num: 8438
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 4.128440366972477e-3
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.58654608916389e-4
allele num: 12606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.550000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

MQ
type: SiteQuality
SIO_000300: 5.566e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 1.108363e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

FS
type: SiteQuality
SIO_000300: 1.842e0

QD
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

GenotypeQuality
all individuals: 5034
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.95076274823456e-5
allele num: 51262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12438
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.102737e6

QD
type: SiteQuality
SIO_000300: 1.551e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 3

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 211

GenotypeQuality
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GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 145
allele frequency: 2.904996594141924e-3
allele num: 49914
num of homozygotes: 2

Latino
type: Population
allele count: 7
allele frequency: 8.76533934385174e-4
allele num: 7986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.470272686633885e-4
allele num: 4474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

South Asian
type: Population
allele count: 66
allele frequency: 5.439261579034119e-3
allele num: 12134
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.05173e6

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

GenotypeQuality
all individuals: 5557
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5119
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 402
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variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.472754050073638e-4
allele num: 6790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43944
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.38539e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

GenotypeQuality
all individuals: 2767
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5468
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variant carriers: 0

GenotypeQuality
all individuals: 684
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 138
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variant carriers: 0

GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
all individuals: 5763
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 297
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variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.223693715386467e-5
allele num: 41530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.680672268907563e-4
allele num: 5950
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.15275e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 5.69e0

VQSLOD
type: SiteQuality
SIO_000300: -9.933e-1

GenotypeQuality
all individuals: 3391
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5652
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GenotypeQuality
all individuals: 429
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.041e1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

FS
type: SiteQuality
SIO_000300: 1.588e0

DP
type: SiteQuality
SIO_000300: 2.344139e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16200
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.376e1

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.164e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 2.345691e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 7.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 2.345691e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.164e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3400
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GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
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African
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European (Non-Finnish)
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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East Asian
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Other
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Latino
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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MQ
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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East Asian
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African
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QD
type: SiteQuality
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MQ
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FS
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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Other
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South Asian
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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East Asian
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Other
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Latino
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ReadPosRankSum
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FS
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QD
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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African
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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MQ
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BaseQRankSum
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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East Asian
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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FS
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DP
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VQSLOD
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QD
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BaseQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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Other
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African
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East Asian
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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MQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

South Asian
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Latino
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Other
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East Asian
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European (Finnish)
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allele num: 6614
num of homozygotes: 0

African
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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South Asian
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East Asian
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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MQRankSum
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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MQ
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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QD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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SIO_000300: -8.070000000000001e-1

ReadPosRankSum
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SIO_000300: 9.419999999999999e-1

MQRankSum
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SIO_000300: -3.3e-2

FS
type: SiteQuality
SIO_000300: 1.733e0

VQSLOD
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DP
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SIO_000300: 2.359567e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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SIO_000300: -1.687e0

ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
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South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
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SIO_000300: -6.596e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.358172e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.637e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.694248808703209e-4
allele num: 66734
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 21
allele frequency: 1.814411612234318e-3
allele num: 11574
num of homozygotes: 0

South Asian
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MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
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SIO_000300: 2.1e-3

VQSLOD
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ClippingRankSum
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MQ
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DP
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QD
type: SiteQuality
SIO_000300: 1.372e1

ReadPosRankSum
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SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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South Asian
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Latino
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
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Other
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num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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QD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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African
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Other
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European (Finnish)
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num of homozygotes: 0

DP
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MQ
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 4.804920238324044e-4
allele num: 10406
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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MQ
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SIO_000300: 5.963e1

FS
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InbreedingCoeff
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SIO_000300: 3.3e-3

QD
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ClippingRankSum
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SIO_000300: -5.2e-1

ReadPosRankSum
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SIO_000300: 4.8e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele num: 8640
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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DP
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MQ
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10406
num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66732
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Other
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MQRankSum
type: SiteQuality
SIO_000300: 4.55e-1

FS
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66730
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele num: 10406
num of homozygotes: 0

South Asian
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Other
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MQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
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SIO_000300: 5.966e1

BaseQRankSum
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SIO_000300: 3.65e-1

DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

African
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Other
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allele num: 908
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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BaseQRankSum
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SIO_000300: 4.34e0

QD
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MQ
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SIO_000300: 5.971e1

DP
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
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Other
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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African
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

Other
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5691
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 3.886e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
SIO_000300: 2.358336e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.507e1

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

DP
type: SiteQuality
SIO_000300: 2.358412e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.358397e6

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

FS
type: SiteQuality
SIO_000300: 4.685e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.001e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.073e0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 14

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 13
allele frequency: 1.249279261964251e-3
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.359474e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

FS
type: SiteQuality
SIO_000300: 1.144e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.446e1

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.484e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.117e1

VQSLOD
type: SiteQuality
SIO_000300: -3.242e0

FS
type: SiteQuality
SIO_000300: 2.1406e1

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

DP
type: SiteQuality
SIO_000300: 2.358242e6

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15915
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.874e0

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.358516e6

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.863e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

GenotypeQuality
all individuals: 16105
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2188
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.358423e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 1.528e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.358306e6

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.865e1

ClippingRankSum
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SIO_000300: -1.286e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
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European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
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African
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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African
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Other
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South Asian
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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MQRankSum
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InbreedingCoeff
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DP
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QD
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele num: 10406
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Other
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 66736
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Other
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East Asian
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South Asian
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Latino
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VQSLOD
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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African
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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Latino
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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Other
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East Asian
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FS
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VQSLOD
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SIO_000300: 5.02e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.360595e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-3

GenotypeQuality
all individuals: 5696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16081
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15911
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.357936e6

FS
type: SiteQuality
SIO_000300: 2.069e0

QD
type: SiteQuality
SIO_000300: 1.408e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8906
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16076
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

FS
type: SiteQuality
SIO_000300: 2.101e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.132e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

DP
type: SiteQuality
SIO_000300: 2.356073e6

QD
type: SiteQuality
SIO_000300: 1.517e1

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15407
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3924
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.625e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.445e0

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e0

MQRankSum
type: SiteQuality
SIO_000300: -1.014e0

VQSLOD
type: SiteQuality
SIO_000300: -2.521e-1

DP
type: SiteQuality
SIO_000300: 2.349584e6

GenotypeQuality
all individuals: 2169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16066
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3361
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5489
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.545e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

FS
type: SiteQuality
SIO_000300: 7.043e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 2.331432e6

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

QD
type: SiteQuality
SIO_000300: 1.315e1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16064
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14843
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.330063e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14728
bin: 6.25e1
variant carriers: 0