2-74691640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691640
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691640
    reference: chr 2
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+383G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.562G>A
  hgvsp: ENSP00000233616.4:p.Val188Met
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.562G>A
  hgvsp: ENSP00000386493.1:p.Val188Met
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.205G>A
  hgvsp: ENSP00000396298.1:p.Val69Met
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.244G>A
  hgvsp: ENSP00000410992.1:p.Val82Met
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+801G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.244G>A
  hgvsp: ENSP00000388201.2:p.Val82Met
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.715G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7018
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val188Met
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

2-74691643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691643
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691643
    reference: chr 2
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.202A>G
  hgvsp: ENSP00000396298.1:p.Arg68Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.712A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.559A>G
  hgvsp: ENSP00000233616.4:p.Arg187Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.241A>G
  hgvsp: ENSP00000410992.1:p.Arg81Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.559A>G
  hgvsp: ENSP00000386493.1:p.Arg187Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+798A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+380A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.241A>G
  hgvsp: ENSP00000388201.2:p.Arg81Gly
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47562
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg187Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-74691648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691648
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691648
    reference: chr 2
allele count: 1
allele frequency: 8.319882856049386e-6
allele num: 120194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.197G>A
  hgvsp: ENSP00000396298.1:p.Ser66Asn
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.707G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+375G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.236G>A
  hgvsp: ENSP00000388201.2:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.554G>A
  hgvsp: ENSP00000386493.1:p.Ser185Asn
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.554G>A
  hgvsp: ENSP00000233616.4:p.Ser185Asn
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.236G>A
  hgvsp: ENSP00000410992.1:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+793G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser185Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

2-74691650-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691650
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691650
    reference: chr 2
allele count: 3
allele frequency: 2.495508085446197e-5
allele num: 120216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.705G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+791G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.552G>C
  hgvsp: ENSP00000386493.1:p.Trp184Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.195G>C
  hgvsp: ENSP00000396298.1:p.Trp65Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.234G>C
  hgvsp: ENSP00000410992.1:p.Trp78Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.234G>C
  hgvsp: ENSP00000388201.2:p.Trp78Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+373G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.552G>C
  hgvsp: ENSP00000233616.4:p.Trp184Cys
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47478
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Trp184Cys
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

2-74691653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691653
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691653
    reference: chr 2
allele count: 3
allele frequency: 2.494926981803666e-5
allele num: 120244
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.549C>T
  hgvsp: ENST00000233616.4:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.231C>T
  hgvsp: ENST00000448666.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.192C>T
  hgvsp: ENST00000414701.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.549C>T
  hgvsp: ENST00000409065.1:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.231C>T
  hgvsp: ENST00000452063.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+788C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+370C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.702C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp183Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-74691656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691656
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691656
    reference: chr 2
allele count: 1
allele frequency: 8.314625426124552e-6
allele num: 120270
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.546G>A
  hgvsp: ENST00000233616.4:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.699G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+785G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+367G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.189G>A
  hgvsp: ENST00000414701.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.228G>A
  hgvsp: ENST00000448666.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.546G>A
  hgvsp: ENST00000409065.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.228G>A
  hgvsp: ENST00000452063.2:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly182Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

2-74691661-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691661
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691661
    reference: chr 2
allele count: 1
allele frequency: 8.312275568559649e-6
allele num: 120304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.541G>A
  hgvsp: ENSP00000386493.1:p.Gly181Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+780G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.184G>A
  hgvsp: ENSP00000396298.1:p.Gly62Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.223G>A
  hgvsp: ENSP00000388201.2:p.Gly75Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+362G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.223G>A
  hgvsp: ENSP00000410992.1:p.Gly75Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.541G>A
  hgvsp: ENSP00000233616.4:p.Gly181Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.694G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly181Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

2-74691681-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691681
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691681
    reference: chr 2
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.203A>G
  hgvsp: ENSP00000410992.1:p.Lys68Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.164A>G
  hgvsp: ENSP00000396298.1:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.203A>G
  hgvsp: ENSP00000388201.2:p.Lys68Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.674A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.521A>G
  hgvsp: ENSP00000233616.4:p.Lys174Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.521A>G
  hgvsp: ENSP00000386493.1:p.Lys174Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+760A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+342A>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys174Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-74691685-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691685
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691685
    reference: chr 2
allele count: 1
allele frequency: 8.306061763875276e-6
allele num: 120394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.517G>C
  hgvsp: ENSP00000386493.1:p.Val173Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.199G>C
  hgvsp: ENSP00000410992.1:p.Val67Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.517G>C
  hgvsp: ENSP00000233616.4:p.Val173Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+338G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.199G>C
  hgvsp: ENSP00000388201.2:p.Val67Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+756G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.670G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.160G>C
  hgvsp: ENSP00000396298.1:p.Val54Leu
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val173Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-74691697-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691697
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691697
    reference: chr 2
allele count: 2
allele frequency: 1.661212352775055e-5
allele num: 120394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+744A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.187A>G
  hgvsp: ENSP00000410992.1:p.Thr63Ala
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.187A>G
  hgvsp: ENSP00000388201.2:p.Thr63Ala
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.505A>G
  hgvsp: ENSP00000233616.4:p.Thr169Ala
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+326A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.148A>G
  hgvsp: ENSP00000396298.1:p.Thr50Ala
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.658A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.505A>G
  hgvsp: ENSP00000386493.1:p.Thr169Ala
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr169Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-74691698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691698
    reference: chr 2
allele count: 1
allele frequency: 8.305785810395521e-6
allele num: 120398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.186C>T
  hgvsp: ENST00000448666.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.147C>T
  hgvsp: ENST00000414701.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.504C>T
  hgvsp: ENST00000233616.4:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+743C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.504C>T
  hgvsp: ENST00000409065.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.186C>T
  hgvsp: ENST00000452063.2:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+325C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.657C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7027
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu168Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

2-74691698-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691698
    reference: chr 2
allele count: 1
allele frequency: 8.305785810395521e-6
allele num: 120398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.186C>G
  hgvsp: ENST00000448666.1:c.186C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.186C>G
  hgvsp: ENST00000452063.2:c.186C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+743C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+325C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.504C>G
  hgvsp: ENST00000409065.1:c.504C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.504C>G
  hgvsp: ENST00000233616.4:c.504C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.657C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.147C>G
  hgvsp: ENST00000414701.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu168Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

2-74691703-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691703
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691703
    reference: chr 2
allele count: 35
allele frequency: 2.907073324695173e-4
allele num: 120396
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.181A>C
  hgvsp: ENST00000448666.1:c.181A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.499A>C
  hgvsp: ENST00000233616.4:c.499A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.181A>C
  hgvsp: ENST00000452063.2:c.181A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.652A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+320A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+738A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.499A>C
  hgvsp: ENST00000409065.1:c.499A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.142A>C
  hgvsp: ENST00000414701.1:c.142A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47658
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg167Arg
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

2-74691708-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691708
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691707
    reference: chr 2
allele count: 1
allele frequency: 8.305785810395521e-6
allele num: 120398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.175delG
  hgvsp: ENSP00000410992.1:p.Ala59ProfsTer2
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.646delG
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.493delG
  hgvsp: ENSP00000386493.1:p.Ala165ProfsTer2
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.175delG
  hgvsp: ENSP00000388201.2:p.Ala59ProfsTer2
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.493delG
  hgvsp: ENSP00000233616.4:p.Ala165ProfsTer2
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+314delG
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.136delG
  hgvsp: ENSP00000396298.1:p.Ala46ProfsTer2
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+732delG
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7007
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala165ProfsTer2
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GC
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-74691709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691709
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691709
    reference: chr 2
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.136G>A
  hgvsp: ENSP00000396298.1:p.Ala46Thr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.646G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.493G>A
  hgvsp: ENSP00000233616.4:p.Ala165Thr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+314G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+732G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.493G>A
  hgvsp: ENSP00000386493.1:p.Ala165Thr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.175G>A
  hgvsp: ENSP00000410992.1:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.175G>A
  hgvsp: ENSP00000388201.2:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala165Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

2-74691720-ATG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691720
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691718
    reference: chr 2
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.162_163delCA
  hgvsp: ENSP00000388201.2:p.Ile55ProfsTer10
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.123_124delCA
  hgvsp: ENSP00000396298.1:p.Ile42ProfsTer10
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+719_97+720delCA
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.480_481delCA
  hgvsp: ENSP00000233616.4:p.Ile161ProfsTer10
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.162_163delCA
  hgvsp: ENSP00000410992.1:p.Ile55ProfsTer10
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.480_481delCA
  hgvsp: ENSP00000386493.1:p.Ile161ProfsTer10
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.633_634delCA
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+301_352+302delCA
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile161ProfsTer10
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: ATG
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-74691721-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691721
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691721
    reference: chr 2
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.163A>G
  hgvsp: ENSP00000388201.2:p.Ile55Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.634A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.124A>G
  hgvsp: ENSP00000396298.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+302A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.481A>G
  hgvsp: ENSP00000233616.4:p.Ile161Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.163A>G
  hgvsp: ENSP00000410992.1:p.Ile55Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.481A>G
  hgvsp: ENSP00000386493.1:p.Ile161Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+720A>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile161Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

2-74691725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691725
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691725
    reference: chr 2
allele count: 1
allele frequency: 8.308684236764266e-6
allele num: 120356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.630A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.159A>G
  hgvsp: ENST00000448666.1:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.159A>G
  hgvsp: ENST00000452063.2:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.477A>G
  hgvsp: ENST00000233616.4:c.477A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+298A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+716A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.477A>G
  hgvsp: ENST00000409065.1:c.477A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.120A>G
  hgvsp: ENST00000414701.1:c.120A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln159Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

2-74691726-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691726
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691726
    reference: chr 2
allele count: 5
allele frequency: 4.154411153763065e-5
allele num: 120354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.119A>T
  hgvsp: ENSP00000396298.1:p.Gln40Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.629A>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+715A>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.476A>T
  hgvsp: ENSP00000386493.1:p.Gln159Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.158A>T
  hgvsp: ENSP00000410992.1:p.Gln53Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.158A>T
  hgvsp: ENSP00000388201.2:p.Gln53Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+297A>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.476A>T
  hgvsp: ENSP00000233616.4:p.Gln159Leu
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln159Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-74691742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691742
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691742
    reference: chr 2
allele count: 1
allele frequency: 8.314210648840998e-6
allele num: 120276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.103C>T
  hgvsp: ENSP00000396298.1:p.Leu35Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.142C>T
  hgvsp: ENSP00000388201.2:p.Leu48Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+281C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.142C>T
  hgvsp: ENSP00000410992.1:p.Leu48Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.460C>T
  hgvsp: ENSP00000386493.1:p.Leu154Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.460C>T
  hgvsp: ENSP00000233616.4:p.Leu154Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+699C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.613C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu154Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

2-74691743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691743
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691743
    reference: chr 2
allele count: 1
allele frequency: 8.314072398942449e-6
allele num: 120278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.459C>T
  hgvsp: ENST00000409065.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.459C>T
  hgvsp: ENST00000233616.4:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.141C>T
  hgvsp: ENST00000452063.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.612C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.141C>T
  hgvsp: ENST00000448666.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.102C>T
  hgvsp: ENST00000414701.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+280C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+698C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6457
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6982
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly153Gly
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

2-74691746-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691746
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691746
    reference: chr 2
allele count: 3
allele frequency: 2.495466569066197e-5
allele num: 120218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.138C>G
  hgvsp: ENSP00000410992.1:p.Asp46Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.99C>G
  hgvsp: ENSP00000396298.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.609C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.456C>G
  hgvsp: ENSP00000233616.4:p.Asp152Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+277C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.456C>G
  hgvsp: ENSP00000386493.1:p.Asp152Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.138C>G
  hgvsp: ENSP00000388201.2:p.Asp46Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+695C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp152Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

2-74691752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691752
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691752
    reference: chr 2
allele count: 2
allele frequency: 1.664115023630433e-5
allele num: 120184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.603C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.132C>T
  hgvsp: ENST00000448666.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+271C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+689C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.132C>T
  hgvsp: ENST00000452063.2:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.93C>T
  hgvsp: ENST00000414701.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.450C>T
  hgvsp: ENST00000409065.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.450C>T
  hgvsp: ENST00000233616.4:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe150Phe
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

2-74691752-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691752
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691752
    reference: chr 2
allele count: 2
allele frequency: 1.664115023630433e-5
allele num: 120184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+271C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.450C>G
  hgvsp: ENSP00000386493.1:p.Phe150Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.603C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.132C>G
  hgvsp: ENSP00000410992.1:p.Phe44Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.93C>G
  hgvsp: ENSP00000396298.1:p.Phe31Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.450C>G
  hgvsp: ENSP00000233616.4:p.Phe150Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.132C>G
  hgvsp: ENSP00000388201.2:p.Phe44Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+689C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe150Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-74691754-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691754
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691754
    reference: chr 2
allele count: 6
allele frequency: 4.994672349493873e-5
allele num: 120128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.448T>G
  hgvsp: ENSP00000386493.1:p.Phe150Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.130T>G
  hgvsp: ENSP00000410992.1:p.Phe44Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.91T>G
  hgvsp: ENSP00000396298.1:p.Phe31Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.130T>G
  hgvsp: ENSP00000388201.2:p.Phe44Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.448T>G
  hgvsp: ENSP00000233616.4:p.Phe150Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+687T>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.601T>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+269T>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26408
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe150Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

2-74691756-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691756
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691756
    reference: chr 2
allele count: 394
allele frequency: 3.368327462982594e-3
allele num: 116972
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.446A>G
  hgvsp: ENSP00000233616.4:p.Glu149Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.128A>G
  hgvsp: ENSP00000410992.1:p.Glu43Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+685A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.446A>G
  hgvsp: ENSP00000386493.1:p.Glu149Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+267A>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.89A>G
  hgvsp: ENSP00000396298.1:p.Glu30Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.128A>G
  hgvsp: ENSP00000388201.2:p.Glu43Gly
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.599A>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 25688
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 24107
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 6608
  bin: 6.75e1
  variant carriers: 10
hgvs: p.Glu149Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

2-74691758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691758
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691758
    reference: chr 2
allele count: 2
allele frequency: 1.663146340246478e-5
allele num: 120254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+683G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.444G>A
  hgvsp: ENSP00000386493.1:p.Trp148Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.87G>A
  hgvsp: ENSP00000396298.1:p.Trp29Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.126G>A
  hgvsp: ENSP00000410992.1:p.Trp42Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+265G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.444G>A
  hgvsp: ENSP00000233616.4:p.Trp148Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.126G>A
  hgvsp: ENSP00000388201.2:p.Trp42Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.597G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp148Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

2-74691764-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691764
    reference: chr 2
allele count: 8
allele frequency: 6.655906284839509e-5
allele num: 120194
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.438T>C
  hgvsp: ENST00000233616.4:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.120T>C
  hgvsp: ENST00000452063.2:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.591T>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.438T>C
  hgvsp: ENST00000409065.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.120T>C
  hgvsp: ENST00000448666.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.81T>C
  hgvsp: ENST00000414701.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+677T>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+259T>C
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47897
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr146Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-74691766-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691766
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691766
    reference: chr 2
allele count: 4
allele frequency: 3.328340822100183e-5
allele num: 120180
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.436T>G
  hgvsp: ENSP00000233616.4:p.Tyr146Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+257T>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.436T>G
  hgvsp: ENSP00000386493.1:p.Tyr146Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.79T>G
  hgvsp: ENSP00000396298.1:p.Tyr27Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.118T>G
  hgvsp: ENSP00000388201.2:p.Tyr40Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+675T>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.118T>G
  hgvsp: ENSP00000410992.1:p.Tyr40Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.589T>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47934
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr146Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/2-74691771-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691771
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691771
    reference: chr 2
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.431G>T
  hgvsp: ENSP00000386493.1:p.Gly144Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.113G>T
  hgvsp: ENSP00000410992.1:p.Gly38Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.584G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.431G>T
  hgvsp: ENSP00000233616.4:p.Gly144Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.74G>T
  hgvsp: ENSP00000396298.1:p.Gly25Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.113G>T
  hgvsp: ENSP00000388201.2:p.Gly38Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+670G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+252G>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly144Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum

2-74691779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691779
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691779
    reference: chr 2
allele count: 2
allele frequency: 1.666305633779348e-5
allele num: 120026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.105C>T
  hgvsp: ENST00000452063.2:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.423C>T
  hgvsp: ENST00000409065.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.423C>T
  hgvsp: ENST00000233616.4:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+244C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+662C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.66C>T
  hgvsp: ENST00000414701.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.576C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.105C>T
  hgvsp: ENST00000448666.1:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7057
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp141Asp
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-74691784-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691784
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691784
    reference: chr 2
allele count: 2
allele frequency: 1.667444807576869e-5
allele num: 119944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.100G>C
  hgvsp: ENSP00000410992.1:p.Gly34Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.100G>C
  hgvsp: ENSP00000388201.2:p.Gly34Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.418G>C
  hgvsp: ENSP00000386493.1:p.Gly140Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.61G>C
  hgvsp: ENSP00000396298.1:p.Gly21Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.418G>C
  hgvsp: ENSP00000233616.4:p.Gly140Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.571G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+657G>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+239G>C
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly140Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

2-74691786-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691786
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691786
    reference: chr 2
allele count: 1
allele frequency: 8.340005337603416e-6
allele num: 119904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.98A>T
  hgvsp: ENSP00000410992.1:p.Gln33Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.416A>T
  hgvsp: ENSP00000386493.1:p.Gln139Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.98A>T
  hgvsp: ENSP00000388201.2:p.Gln33Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.416A>T
  hgvsp: ENSP00000233616.4:p.Gln139Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.59A>T
  hgvsp: ENSP00000396298.1:p.Gln20Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+655A>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.569A>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+237A>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln139Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-74691788-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691788
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691788
    reference: chr 2
allele count: 1
allele frequency: 8.340561820244212e-6
allele num: 119896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.96G>A
  hgvsp: ENST00000452063.2:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.414G>A
  hgvsp: ENST00000233616.4:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.57G>A
  hgvsp: ENST00000414701.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.414G>A
  hgvsp: ENST00000409065.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.96G>A
  hgvsp: ENST00000448666.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+653G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.567G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+235G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu138Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-74691792-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691792
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691792
    reference: chr 2
allele count: 1
allele frequency: 8.345434212942099e-6
allele num: 119826
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.410G>T
  hgvsp: ENSP00000233616.4:p.Cys137Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.53G>T
  hgvsp: ENSP00000396298.1:p.Cys18Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.92G>T
  hgvsp: ENSP00000388201.2:p.Cys31Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.563G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+231G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.410G>T
  hgvsp: ENSP00000386493.1:p.Cys137Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.92G>T
  hgvsp: ENSP00000410992.1:p.Cys31Phe
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+649G>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys137Phe
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

2-74691792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691792
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691792
    reference: chr 2
allele count: 1
allele frequency: 8.345434212942099e-6
allele num: 119826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.410G>A
  hgvsp: ENSP00000386493.1:p.Cys137Tyr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.410G>A
  hgvsp: ENSP00000233616.4:p.Cys137Tyr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+649G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.92G>A
  hgvsp: ENSP00000410992.1:p.Cys31Tyr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+231G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.563G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.53G>A
  hgvsp: ENSP00000396298.1:p.Cys18Tyr
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.92G>A
  hgvsp: ENSP00000388201.2:p.Cys31Tyr
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7001
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys137Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-74691794-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691794
    reference: chr 2
allele count: 1
allele frequency: 8.347802858287698e-6
allele num: 119792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.408G>A
  hgvsp: ENST00000409065.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.408G>A
  hgvsp: ENST00000233616.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.90G>A
  hgvsp: ENST00000448666.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.51G>A
  hgvsp: ENST00000414701.1:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+229G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.90G>A
  hgvsp: ENST00000452063.2:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.561G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+647G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6995
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr136Thr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

2-74691799-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691799
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691799
    reference: chr 2
allele count: 2
allele frequency: 1.671569938486226e-5
allele num: 119648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+224C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.403C>G
  hgvsp: ENSP00000386493.1:p.His135Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+642C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.85C>G
  hgvsp: ENSP00000388201.2:p.His29Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.403C>G
  hgvsp: ENSP00000233616.4:p.His135Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.85C>G
  hgvsp: ENSP00000410992.1:p.His29Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.556C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.46C>G
  hgvsp: ENSP00000396298.1:p.His16Asp
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.75e1
  variant carriers: 2
hgvs: p.His135Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

2-74691801-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691801
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691801
    reference: chr 2
allele count: 1
allele frequency: 8.360225391676559e-6
allele num: 119614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+640G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.401G>A
  hgvsp: ENSP00000233616.4:p.Arg134Lys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.83G>A
  hgvsp: ENSP00000410992.1:p.Arg28Lys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+222G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.44G>A
  hgvsp: ENSP00000396298.1:p.Arg15Lys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.83G>A
  hgvsp: ENSP00000388201.2:p.Arg28Lys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.401G>A
  hgvsp: ENSP00000386493.1:p.Arg134Lys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.554G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg134Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-74691805-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691805
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691805
    reference: chr 2
allele count: 5
allele frequency: 4.184450581638631e-5
allele num: 119490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.79C>A
  hgvsp: ENSP00000388201.2:p.Leu27Ile
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.397C>A
  hgvsp: ENSP00000386493.1:p.Leu133Ile
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.79C>A
  hgvsp: ENSP00000410992.1:p.Leu27Ile
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.40C>A
  hgvsp: ENSP00000396298.1:p.Leu14Ile
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+218C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+636C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.550C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.397C>A
  hgvsp: ENSP00000233616.4:p.Leu133Ile
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu133Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

2-74691806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691806
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691806
    reference: chr 2
allele count: 5
allele frequency: 4.188236082491498e-5
allele num: 119382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.549G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.396G>A
  hgvsp: ENST00000233616.4:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.78G>A
  hgvsp: ENST00000452063.2:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.39G>A
  hgvsp: ENST00000414701.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.396G>A
  hgvsp: ENST00000409065.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.78G>A
  hgvsp: ENST00000448666.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+635G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+217G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys132Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

2-74691813-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691813
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691813
    reference: chr 2
allele count: 1
allele frequency: 8.40180806909647e-6
allele num: 119022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+210C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.32C>G
  hgvsp: ENSP00000396298.1:p.Thr11Ser
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.71C>G
  hgvsp: ENSP00000388201.2:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.71C>G
  hgvsp: ENSP00000410992.1:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.389C>G
  hgvsp: ENSP00000233616.4:p.Thr130Ser
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.542C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.389C>G
  hgvsp: ENSP00000386493.1:p.Thr130Ser
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+628C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr130Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-74691816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691816
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691816
    reference: chr 2
allele count: 6
allele frequency: 5.046681806712087e-5
allele num: 118890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.386G>A
  hgvsp: ENSP00000386493.1:p.Gly129Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.68G>A
  hgvsp: ENSP00000388201.2:p.Gly23Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.386G>A
  hgvsp: ENSP00000233616.4:p.Gly129Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.539G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.68G>A
  hgvsp: ENSP00000410992.1:p.Gly23Glu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+207G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+625G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.29G>A
  hgvsp: ENSP00000396298.1:p.Gly10Glu
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46260
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly129Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-74691817-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691817
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691817
    reference: chr 2
allele count: 3
allele frequency: 2.52465748813411e-5
allele num: 118828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.385G>T
  hgvsp: ENSP00000386493.1:p.Gly129Trp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.28G>T
  hgvsp: ENSP00000396298.1:p.Gly10Trp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.385G>T
  hgvsp: ENSP00000233616.4:p.Gly129Trp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.538G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.67G>T
  hgvsp: ENSP00000410992.1:p.Gly23Trp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+206G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.67G>T
  hgvsp: ENSP00000388201.2:p.Gly23Trp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+624G>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly129Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

2-74691819-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691819
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691819
    reference: chr 2
allele count: 1
allele frequency: 8.424599831508003e-6
allele num: 118700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.65C>T
  hgvsp: ENSP00000410992.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.65C>T
  hgvsp: ENSP00000388201.2:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.383C>T
  hgvsp: ENSP00000386493.1:p.Pro128Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+622C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.536C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.26C>T
  hgvsp: ENSP00000396298.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.383C>T
  hgvsp: ENSP00000233616.4:p.Pro128Leu
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+204C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro128Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-74691821-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691821
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691821
    reference: chr 2
allele count: 3
allele frequency: 2.529084471421345e-5
allele num: 118620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+620C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.381C>G
  hgvsp: ENST00000233616.4:c.381C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.63C>G
  hgvsp: ENST00000448666.1:c.63C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.534C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.381C>G
  hgvsp: ENST00000409065.1:c.381C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.24C>G
  hgvsp: ENST00000414701.1:c.24C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.63C>G
  hgvsp: ENST00000452063.2:c.63C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+202C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24891
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6385
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr127Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

2-74691824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691824
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691824
    reference: chr 2
allele count: 1
allele frequency: 8.452656669991378e-6
allele num: 118306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+199C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.60C>T
  hgvsp: ENST00000448666.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.378C>T
  hgvsp: ENST00000233616.4:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.531C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+617C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.21C>T
  hgvsp: ENST00000414701.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.60C>T
  hgvsp: ENST00000452063.2:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.378C>T
  hgvsp: ENST00000409065.1:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45777
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr126Thr
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-74691827-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691827
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691827
    reference: chr 2
allele count: 9
allele frequency: 7.651629797146792e-5
allele num: 117622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.18C>G
  hgvsp: ENST00000414701.1:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.375C>G
  hgvsp: ENST00000409065.1:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+196C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+614C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.57C>G
  hgvsp: ENST00000452063.2:c.57C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.57C>G
  hgvsp: ENST00000448666.1:c.57C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.375C>G
  hgvsp: ENST00000233616.4:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.528C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23992
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly125Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

2-74691828-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691828
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691828
    reference: chr 2
allele count: 1
allele frequency: 8.50210001870462e-6
allele num: 117618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.527G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.17G>A
  hgvsp: ENSP00000396298.1:p.Gly6Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.56G>A
  hgvsp: ENSP00000388201.2:p.Gly19Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+195G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.374G>A
  hgvsp: ENSP00000233616.4:p.Gly125Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.56G>A
  hgvsp: ENSP00000410992.1:p.Gly19Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.374G>A
  hgvsp: ENSP00000386493.1:p.Gly125Asp
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+613G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly125Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-74691832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691832
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691832
    reference: chr 2
allele count: 2
allele frequency: 1.703084285641296e-5
allele num: 117434
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.52C>T
  hgvsp: ENSP00000388201.2:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.370C>T
  hgvsp: ENSP00000386493.1:p.Gln124Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.523C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.370C>T
  hgvsp: ENSP00000233616.4:p.Gln124Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+191C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.52C>T
  hgvsp: ENSP00000410992.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: stop_gained
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.13C>T
  hgvsp: ENSP00000396298.1:p.Gln5Ter
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+609C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln124Ter
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

2-74691837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691837
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691837
    reference: chr 2
allele count: 1
allele frequency: 8.577506347354697e-6
allele num: 116584
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.365C>T
  hgvsp: ENSP00000233616.4:p.Ala122Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.365C>T
  hgvsp: ENSP00000386493.1:p.Ala122Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+186C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.47C>T
  hgvsp: ENSP00000410992.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.518C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.8C>T
  hgvsp: ENSP00000396298.1:p.Ala3Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.47C>T
  hgvsp: ENSP00000388201.2:p.Ala16Val
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+604C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala122Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/2-74691839-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691839
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691839
    reference: chr 2
allele count: 2
allele frequency: 1.72458394412348e-5
allele num: 115970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.6G>T
  hgvsp: ENSP00000396298.1:p.Trp2Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+602G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+184G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.363G>T
  hgvsp: ENSP00000233616.4:p.Trp121Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.516G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.45G>T
  hgvsp: ENSP00000410992.1:p.Trp15Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.363G>T
  hgvsp: ENSP00000386493.1:p.Trp121Cys
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.45G>T
  hgvsp: ENSP00000388201.2:p.Trp15Cys
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Trp121Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS

2-74691841-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691841
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691841
    reference: chr 2
allele count: 1
allele frequency: 8.619797951936006e-6
allele num: 116012
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.361T>A
  hgvsp: ENSP00000233616.4:p.Trp121Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.43T>A
  hgvsp: ENSP00000388201.2:p.Trp15Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.43T>A
  hgvsp: ENSP00000410992.1:p.Trp15Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+600T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.4T>A
  hgvsp: ENSP00000396298.1:p.Trp2Arg
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+182T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.514T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.361T>A
  hgvsp: ENSP00000386493.1:p.Trp121Arg
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp121Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

2-74691856-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691856
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691856
    reference: chr 2
allele count: 1
allele frequency: 8.892524943532467e-6
allele num: 112454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-7C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-7C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-7C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-7C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-7C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+585C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+167C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-7C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20253
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
hgvs: c.353-7C>T
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

2-74691868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691868
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691868
    reference: chr 2
allele count: 1
allele frequency: 9.132586896564322e-6
allele num: 109498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+155G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+573G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

2-74691870-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691870
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691870
    reference: chr 2
allele count: 1
allele frequency: 9.16254352208173e-6
allele num: 109140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+571A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-21A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+153A>C
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14863
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

2-74691879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691879
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691879
    reference: chr 2
allele count: 1
allele frequency: 9.372949667260288e-6
allele num: 106690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-30C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+562C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-30C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-30C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+144C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-30C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-30C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-30C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5820
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-74691881-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691881
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691881
    reference: chr 2
allele count: 1
allele frequency: 9.440196356084207e-6
allele num: 105930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+560C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-32C>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+142C>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7427
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/2-74691882-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691882
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691882
    reference: chr 2
allele count: 1
allele frequency: 9.501007106753316e-6
allele num: 105252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-33G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-33G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-33G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-33G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+559G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-33G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+141G>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-33G>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

2-74691882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691882
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691882
    reference: chr 2
allele count: 1
allele frequency: 9.501007106753316e-6
allele num: 105252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-33G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-33G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-33G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-33G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+559G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-33G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+141G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-33G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19576
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7717
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

2-74691884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691884
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691884
    reference: chr 2
allele count: 4
allele frequency: 3.815774411416797e-5
allele num: 104828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+139C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-35C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+557C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13442
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19608
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-74691893-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691893
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691893
    reference: chr 2
allele count: 1
allele frequency: 9.981434531770907e-6
allele num: 100186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+130A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.35-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.35-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.353-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.506-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.353-44A>C
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+548A>C
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6531
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-74691979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691979
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691979
    reference: chr 2
allele count: 43
allele frequency: 7.013080210066217e-4
allele num: 61314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-130G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+44G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+462G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23375
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6956
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17447
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22992
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

2-74691981-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691981
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691981
    reference: chr 2
allele count: 1
allele frequency: 1.628664495114006e-5
allele num: 61400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+42C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-132C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+42C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+42C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+42C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+460C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+42C>G
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+42C>G
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4813
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

2-74691988-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691988
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691988
    reference: chr 2
allele count: 1
allele frequency: 1.63907556138338e-5
allele num: 61010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+35T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+35T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+453T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-139T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+35T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+35T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+35T>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+35T>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16978
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4748
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

2-74691989-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691989
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691989
    reference: chr 2
allele count: 1
allele frequency: 1.641928280572704e-5
allele num: 60904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+34C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+34C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+34C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-140C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+34C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+34C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+452C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+34C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5690
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

2-74691994-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74691994
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74691994
    reference: chr 2
allele count: 2
allele frequency: 3.203998590240621e-5
allele num: 62422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-145G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+29G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+447G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16441
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3577
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8125
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

2-74692002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74692002
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74692002
    reference: chr 2
allele count: 1
allele frequency: 1.581878005568211e-5
allele num: 63216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+21G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+439G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-153G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-74692004-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74692004
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74692004
    reference: chr 2
allele count: 2
allele frequency: 3.158559696778269e-5
allele num: 63320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+437G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+19G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-155G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+19G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

2-74692005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74692005
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74692005
    reference: chr 2
allele count: 5
allele frequency: 7.889919838414442e-5
allele num: 63372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+18C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+18C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+18C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-156C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+436C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+18C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+18C>T
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+18C>T
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11915
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 171
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

2-74692007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74692007
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74692007
    reference: chr 2
allele count: 3
allele frequency: 4.683694498220196e-5
allele num: 64052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000388201
  ensembl transcript: ENST00000452063
  gene symbol: MOGS
  hgvsc: ENST00000452063.2:c.34+16G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000439971
  ensembl transcript: ENST00000535045
  gene symbol: MOGS
  hgvsc: ENST00000535045.1:c.352+16G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000410992
  ensembl transcript: ENST00000448666
  gene symbol: MOGS
  hgvsc: ENST00000448666.1:c.34+16G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000396298
  ensembl transcript: ENST00000414701
  gene symbol: MOGS
  hgvsc: ENST00000414701.1:c.-5-158G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000233616
  ensembl transcript: ENST00000233616
  gene symbol: MOGS
  hgvsc: ENST00000233616.4:c.352+16G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl protein: ENSP00000386493
  ensembl transcript: ENST00000409065
  gene symbol: MOGS
  hgvsc: ENST00000409065.1:c.352+16G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000462443
  gene symbol: MOGS
  hgvsc: ENST00000462443.1:n.97+434G>A
  variant of: http://identifiers.org/hgnc/24862
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115275
  ensembl transcript: ENST00000486036
  gene symbol: MOGS
  hgvsc: ENST00000486036.1:n.505+16G>A
  variant of: http://identifiers.org/hgnc/24862
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 47554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.843e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.978e0

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

DP
type: SiteQuality
SIO_000300: 1.539879e6

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508659706716553e-5
allele num: 66284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.187e0

FS
type: SiteQuality
SIO_000300: 7.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.94e-1

DP
type: SiteQuality
SIO_000300: 1.540379e6

QD
type: SiteQuality
SIO_000300: 1.393e1

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6997
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47400
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507613447911955e-5
allele num: 66330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.541309e6

QD
type: SiteQuality
SIO_000300: 1.232e1

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

FS
type: SiteQuality
SIO_000300: 1.627e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.369e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.516e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6998
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 93
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 1.541707e6

FS
type: SiteQuality
SIO_000300: 6.22e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

QD
type: SiteQuality
SIO_000300: 1.399e1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47549
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817520901490367e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.013e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

FS
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.541757e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.205e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6999
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50665943470138e-5
allele num: 66372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

DP
type: SiteQuality
SIO_000300: 1.542001e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.075e0

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 1.774e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.881e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

QD
type: SiteQuality
SIO_000300: 9.43e0

DP
type: SiteQuality
SIO_000300: 1.542422e6

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47651
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.36e-1

FS
type: SiteQuality
SIO_000300: 2.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.543524e6

VQSLOD
type: SiteQuality
SIO_000300: 5.23e-1

QD
type: SiteQuality
SIO_000300: 1.15e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7025
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.185e0

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

DP
type: SiteQuality
SIO_000300: 1.543663e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.256e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7025
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1463
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009872381411028e-5
allele num: 66448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

FS
type: SiteQuality
SIO_000300: 1.3734e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

DP
type: SiteQuality
SIO_000300: 1.544029e6

GenotypeQuality
all individuals: 1706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504800312998465e-5
allele num: 66454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.309e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.715e-1

DP
type: SiteQuality
SIO_000300: 1.544104e6

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47688
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7027
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504800312998465e-5
allele num: 66454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: -2.715e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.309e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.544104e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 707
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variant carriers: 35

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.084302325581395e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025430680885972e-4
allele num: 9752
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.914433880726015e-4
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.655479637600457e-4
allele num: 66446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

DP
type: SiteQuality
SIO_000300: 1.547327e6

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 1702
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variant carriers: 0

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.138e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.023e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e-1

DP
type: SiteQuality
SIO_000300: 1.543639e6

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 742
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variant carriers: 0

GenotypeQuality
all individuals: 7011
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 55
bin: 3.75e1
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GenotypeQuality
all individuals: 1453
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505072092953252e-5
allele num: 66442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.452e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

QD
type: SiteQuality
SIO_000300: 1.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.736e0

DP
type: SiteQuality
SIO_000300: 1.543584e6

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 674
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variant carriers: 1

GenotypeQuality
all individuals: 7014
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505434618974498e-5
allele num: 66426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.542908e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.663e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 6
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505434618974498e-5
allele num: 66426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 4.553e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 7.2e0

DP
type: SiteQuality
SIO_000300: 1.542803e6

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47528
bin: 6.25e1
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GenotypeQuality
all individuals: 307
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
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GenotypeQuality
all individuals: 7010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026483268322726e-4
allele num: 9742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.542163e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 7.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.078e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 7.25e1
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GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.528306432185015e-5
allele num: 66416
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.54256e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506841058405159e-5
allele num: 66364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 1.539092e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

DP
type: SiteQuality
SIO_000300: 1.539101e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.189e0

FS
type: SiteQuality
SIO_000300: 3.955e0

VQSLOD
type: SiteQuality
SIO_000300: -7.916e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

QD
type: SiteQuality
SIO_000300: 1.163e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

GenotypeQuality
all individuals: 226
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522976721746472e-5
allele num: 66328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.540168e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.344e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508159140952553e-5
allele num: 66306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.540101e6

MQ
type: SiteQuality
SIO_000300: 5.893e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.765e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46998
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

DP
type: SiteQuality
SIO_000300: 1.540101e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.765e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.033060357901122e-4
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.060156571899464e-4
allele num: 9708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018594542381067e-5
allele num: 66256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.0932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.542e0

DP
type: SiteQuality
SIO_000300: 1.540255e6

VQSLOD
type: SiteQuality
SIO_000300: -3.95e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 7.9e-1

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 229

GenotypeQuality
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GenotypeQuality
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variant carriers: 15

Other
type: Population
allele count: 7
allele frequency: 8.373205741626795e-3
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 223
allele frequency: 3.466931998383135e-3
allele num: 64322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 109
allele frequency: 1.789819376026273e-2
allele num: 6090
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.956521739130435e-4
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 40
allele frequency: 4.348771472059143e-3
allele num: 9198
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.867167331612298e-4
allele num: 8522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.03595e2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.27e0

VQSLOD
type: SiteQuality
SIO_000300: -2.026e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.548e0

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

DP
type: SiteQuality
SIO_000300: 1.649534e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.16e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 114
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.059308072487644e-4
allele num: 9712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.541188e6

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.734e0

QD
type: SiteQuality
SIO_000300: 1.32e1

GenotypeQuality
all individuals: 1664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.055101422948834e-4
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.03172688340672e-5
allele num: 66316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

FS
type: SiteQuality
SIO_000300: 1.804e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.540804e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.032818532818533e-5
allele num: 66304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.565e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.52e-1

DP
type: SiteQuality
SIO_000300: 1.54022e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509388395822013e-5
allele num: 66252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.164e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 8.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.53871e6

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510619656182966e-5
allele num: 66198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.108e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 1.537221e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.186e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.462e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 7045
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024071610015725e-5
allele num: 66136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.572e0

VQSLOD
type: SiteQuality
SIO_000300: -5.18e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.415e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 1.536127e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512538947877908e-5
allele num: 66114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e0

FS
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

QD
type: SiteQuality
SIO_000300: 1.295e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

DP
type: SiteQuality
SIO_000300: 1.534945e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512630464377553e-5
allele num: 66110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513500423780119e-5
allele num: 66072
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 195
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513500423780119e-5
allele num: 66072
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.85e-1

DP
type: SiteQuality
SIO_000300: 1.533667e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

FS
type: SiteQuality
SIO_000300: 3.942e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e0

QD
type: SiteQuality
SIO_000300: 1.064e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e-1

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.532659e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

QD
type: SiteQuality
SIO_000300: 1.693e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeQuality
all individuals: 1320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 6970
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.031313468125739e-5
allele num: 65978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 1.529966e6

QD
type: SiteQuality
SIO_000300: 1.213e1

MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038205980066445e-4
allele num: 9632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.568e-1

FS
type: SiteQuality
SIO_000300: 6.542e0

MQRankSum
type: SiteQuality
SIO_000300: -1.428e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.991e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

QD
type: SiteQuality
SIO_000300: 1.144e1

DP
type: SiteQuality
SIO_000300: 1.528783e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.461e0

GenotypeQuality
all individuals: 587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.522533495736906e-4
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.069250144144691e-5
allele num: 65906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.167e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.318e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

DP
type: SiteQuality
SIO_000300: 1.525553e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.403e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.593245049204227e-5
allele num: 65848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 1.523141e6

MQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

FS
type: SiteQuality
SIO_000300: 2.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.779e0

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.15839389087326e-5
allele num: 16238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.254e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

DP
type: SiteQuality
SIO_000300: 1.514328e6

VQSLOD
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.976744186046512e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.253e0

MQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

DP
type: SiteQuality
SIO_000300: 1.511985e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 3.574e0

VQSLOD
type: SiteQuality
SIO_000300: 9.389999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 357
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variant carriers: 3

GenotypeQuality
all individuals: 1810
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65566
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.489183531053733e-4
allele num: 8598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.266e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.61e0

MQRankSum
type: SiteQuality
SIO_000300: -8.87e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.510309e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

GenotypeQuality
all individuals: 139
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 100
bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1273
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GenotypeQuality
all individuals: 1911
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GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 6772
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GenotypeQuality
all individuals: 321
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
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GenotypeQuality
all individuals: 325
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65492
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.185e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

FS
type: SiteQuality
SIO_000300: 1.935e0

DP
type: SiteQuality
SIO_000300: 1.507912e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.26e-1

GenotypeQuality
all individuals: 61
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.049097775912715e-4
allele num: 9532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.05548765582987e-5
allele num: 65456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.505401e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.31e0

VQSLOD
type: SiteQuality
SIO_000300: 2.17e-1

QD
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SIO_000300: 8.57e0

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.195e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 1.499052e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.077121930202499e-4
allele num: 64988
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.157407407407407e-3
allele num: 864
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 1.13e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.11e-1

DP
type: SiteQuality
SIO_000300: 1.486859e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64998
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.295643414756988e-5
allele num: 15884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.446e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

FS
type: SiteQuality
SIO_000300: 7.007e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

DP
type: SiteQuality
SIO_000300: 1.48604e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.081094404732561e-5
allele num: 64912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15852
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.25e1

FS
type: SiteQuality
SIO_000300: 1.293e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.482005e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.326e0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550291454793501e-5
allele num: 64504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.335e0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.578e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 1.463451e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 7.73e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6242
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.756543123133673e-4
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64160
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.744e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.307e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557438325442313e-5
allele num: 64208
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

QD
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9271
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603283524658501e-5
allele num: 62372
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.204e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.184e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.034e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.505e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.335324869305452e-5
allele num: 10712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14500
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.794e0

MQRankSum
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BaseQRankSum
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SIO_000300: 2.72e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

QD
type: SiteQuality
SIO_000300: 1.532e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.386146048432514e-5
allele num: 10654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5856
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 1.04e1

QD
type: SiteQuality
SIO_000300: 1.513e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e-1

BaseQRankSum
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SIO_000300: 3.44e0

VQSLOD
type: SiteQuality
SIO_000300: -8.353e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

DP
type: SiteQuality
SIO_000300: 1.186692e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59336
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.563886763580719e-5
allele num: 10456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14138
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.084176e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

QD
type: SiteQuality
SIO_000300: 1.151e1

MQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.407e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.72e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69715895590781e-5
allele num: 58922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.693e0

DP
type: SiteQuality
SIO_000300: 1.066235e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.425e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.19e-1

FS
type: SiteQuality
SIO_000300: 3.139e0

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58558
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.320655044902272e-4
allele num: 7572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 1.055258e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 2.741e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.178411501296253e-4
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.741e0

DP
type: SiteQuality
SIO_000300: 1.055258e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58302
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.202535292422933e-5
allele num: 13884
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.992547245142401e-4
allele num: 7514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5620
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.039356e6

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
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SIO_000300: -1.092e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.788780767029193e-5
allele num: 55904
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.79646e5

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 7.687e0

ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4584
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.865165320038966e-5
allele num: 34902
num of homozygotes: 0

East Asian
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allele frequency: 9.47653429602888e-3
allele num: 4432
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 3.88e0

ClippingRankSum
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SIO_000300: 0.0e0

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1816
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.859593937660852e-5
allele num: 34970
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

ClippingRankSum
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MQRankSum
type: SiteQuality
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DP
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SIO_000300: 6.79205e5

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.453e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -3.865e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4796
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34708
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1764
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.769441187964049e-5
allele num: 10236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.261e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 2.18435998252512e-4
allele num: 4578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.139e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 6.82544e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 4.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.057e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.184100418410042e-4
allele num: 4780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1958
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

DP
type: SiteQuality
SIO_000300: 7.16135e5

BaseQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.257e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35802
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.043318348998774e-4
allele num: 4894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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allele num: 10454
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VQSLOD
type: SiteQuality
SIO_000300: -2.021e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.56264e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.077e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.789244672542675e-5
allele num: 35852
num of homozygotes: 0

African
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 5.025125628140704e-4
allele num: 1990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 480
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -9.900000000000001e-3

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4940
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 4622
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African
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South Asian
type: Population
allele count: 3
allele frequency: 2.856054836252856e-4
allele num: 10504
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European (Non-Finnish)
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allele count: 2
allele frequency: 5.580668564093978e-5
allele num: 35838
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1988
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Other
type: Population
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VQSLOD
type: SiteQuality
SIO_000300: -1.222e0

FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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