4-100131534-ATTAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131534
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131529
    reference: chr 4
allele count: 1
allele frequency: 8.322929671244279e-6
allele num: 120150
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.350+33_350+37delCTTAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-188_263-184delCTTAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+5949_3789+5953delAAGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.350+33_350+37delCTTAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+5949_407+5953delAAGTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.*31+33_*31+37delCTTAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.350+33_350+37delCTTAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+5953_166+5957delAAGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-61+33_-61+37delCTTAA
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17547
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: ATTAAG
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

4-100131545-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131545
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131545
    reference: chr 4
allele count: 3
allele frequency: 2.496546444085682e-5
allele num: 120166
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+5957A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-194T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.350+27T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.350+27T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+5957A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+5961A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-61+27T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.350+27T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.*31+27T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

4-100131554-ATAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131554
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131551
    reference: chr 4
allele count: 4
allele frequency: 3.32723340542339e-5
allele num: 120220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-61+15_-61+17delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+5973_166+5975delTTA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.*31+15_*31+17delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.350+15_350+17delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.350+15_350+17delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+5969_3789+5971delTTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.350+15_350+17delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-206_263-204delATA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+5969_407+5971delTTA
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21236
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17521
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6985
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: ATAT
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

4-100131582-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131582
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131582
    reference: chr 4
allele count: 422
allele frequency: 3.498938710533298e-3
allele num: 120608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.340A>G
  hgvsp: ENSP00000378358.1:p.Ile114Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+5994T>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.340A>G
  hgvsp: ENSP00000237653.7:p.Ile114Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-231A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.340A>G
  hgvsp: ENSP00000378359.2:p.Ile114Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+5998T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+5994T>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-71A>G
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 21442
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile114Val
num of homozygotes: 9
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum

4-100131583-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131583
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131583
    reference: chr 4
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+5995A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.*20T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.339T>C
  hgvsp: ENST00000237653.7:c.339T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.339T>C
  hgvsp: ENST00000394899.2:c.339T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-72T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-232T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.339T>C
  hgvsp: ENST00000394897.1:c.339T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+5999A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+5995A>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys113Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

4-100131607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131607
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131607
    reference: chr 4
allele count: 2
allele frequency: 1.653931394925738e-5
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.315C>T
  hgvsp: ENST00000237653.7:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.315C>T
  hgvsp: ENST00000394897.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6019G>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-96C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.315C>T
  hgvsp: ENST00000394899.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6019G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-256C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.173C>T
  hgvsp: ENSP00000425275.1:p.Ala58Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6023G>A
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6736
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32746
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala58Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-100131616-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131616
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131616
    reference: chr 4
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.306T>C
  hgvsp: ENST00000394899.2:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6028A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.164T>C
  hgvsp: ENSP00000425275.1:p.Val55Ala
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-105T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.306T>C
  hgvsp: ENST00000237653.7:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-265T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6032A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.306T>C
  hgvsp: ENST00000394897.1:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6028A>G
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val55Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-100131618-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131618
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131618
    reference: chr 4
allele count: 102
allele frequency: 8.431563807099046e-4
allele num: 120974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.162T>G
  hgvsp: ENSP00000425275.1:p.Asn54Lys
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.304T>G
  hgvsp: ENSP00000237653.7:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.304T>G
  hgvsp: ENSP00000378358.1:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-107T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6034A>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.304T>G
  hgvsp: ENSP00000378359.2:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-267T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6030A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6030A>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 17610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3853
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8468
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys102Gly
num of homozygotes: 1
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

4-100131644-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131644
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131644
    reference: chr 4
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.136C>T
  hgvsp: ENSP00000425275.1:p.His46Tyr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-133C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.278C>T
  hgvsp: ENSP00000237653.7:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6056G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-293C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6060G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.278C>T
  hgvsp: ENSP00000378358.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6056G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.278C>T
  hgvsp: ENSP00000378359.2:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6673
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr93Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

4-100131648-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131648
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131648
    reference: chr 4
allele count: 3
allele frequency: 2.482580559739164e-5
allele num: 120842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.132A>G
  hgvsp: ENST00000507484.1:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.274A>G
  hgvsp: ENSP00000378359.2:p.Ile92Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6060T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.274A>G
  hgvsp: ENSP00000378358.1:p.Ile92Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.274A>G
  hgvsp: ENSP00000237653.7:p.Ile92Val
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-137A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6064T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-297A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6060T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6672
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile92Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

4-100131665-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131665
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131665
    reference: chr 4
allele count: 1
allele frequency: 8.290499088045101e-6
allele num: 120620
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6077A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6077A>G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-6T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-6T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-6T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-6T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-6T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-314T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6081A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32339
  bin: 6.25e1
  variant carriers: 0
hgvs: c.263-6T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

4-100131670-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131670
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131670
    reference: chr 4
allele count: 1
allele frequency: 8.303303053954863e-6
allele num: 120434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6086A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-11T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-11T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6082A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-11T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-11T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6082A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-11T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-319T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6660
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-100131678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131678
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131678
    reference: chr 4
allele count: 4
allele frequency: 3.338173685176839e-5
allele num: 119826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6094G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-19C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6090G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6090G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-19C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-19C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-327C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-19C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-19C>T
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3775
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

4-100131680-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131680
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131679
    reference: chr 4
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-22delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-22delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6094delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6094delT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-22delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-22delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-22delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6098delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-330delA
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: CT
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/4-100131689-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131689
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131689
    reference: chr 4
allele count: 2
allele frequency: 1.681661481543765e-5
allele num: 118930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6105A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-30T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6101A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-338T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6101A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-30T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-30T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-30T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-30T>G
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19196
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

4-100131689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131689
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131689
    reference: chr 4
allele count: 2
allele frequency: 1.681661481543765e-5
allele num: 118930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-30T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-30T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6105A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6101A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-30T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-30T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-30T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6101A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-338T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15257
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

4-100131705-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131705
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131705
    reference: chr 4
allele count: 1
allele frequency: 8.543065593657628e-6
allele num: 117054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6121T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-46A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6117T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-46A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-354A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-46A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-46A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-46A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6117T>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3535
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/4-100131706-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131706
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131706
    reference: chr 4
allele count: 1
allele frequency: 8.54963920522554e-6
allele num: 116964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-47T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6122A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6118A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-47T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-47T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-355T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6118A>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-47T>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-47T>G
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11803
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5005
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum

4-100131709-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100131709
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100131709
    reference: chr 4
allele count: 1
allele frequency: 8.597713008339781e-6
allele num: 116310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.121-50C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.263-50C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.263-358C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+6121G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-148-50C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+6125G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+6121G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.263-50C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.263-50C>A
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4812
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2812
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ

4-100134712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134712
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134712
    reference: chr 4
allele count: 4
allele frequency: 6.621858755752739e-5
allele num: 60406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9124G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2606C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9124G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9128G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2606C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+51C>T
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

4-100134713-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134713
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134714
    reference: chr 4
allele count: 76677
allele frequency: 6.648717548514645e-1
allele num: 115326
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2604_-149+2605insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9125_3789+9126insT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2604_120+2605insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+49_262+50insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+49_262+50insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+49_262+50insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+49_262+50insA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9129_166+9130insT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9125_407+9126insT
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 5.25e1
  variant carriers: 5588
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 4.25e1
  variant carriers: 5058
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 7.75e1
  variant carriers: 1314
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.25e1
  variant carriers: 1807
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 7.5e0
  variant carriers: 1822
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 9.75e1
  variant carriers: 4931
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 5.75e1
  variant carriers: 4871
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 3006
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.75e1
  variant carriers: 821
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 774
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 7.25e1
  variant carriers: 1894
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.25e1
  variant carriers: 911
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 1672
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 4.75e1
  variant carriers: 5661
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 599
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.75e1
  variant carriers: 4168
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 6.25e1
  variant carriers: 3776
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.75e1
  variant carriers: 2611
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 6.75e1
  variant carriers: 255
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.75e1
  variant carriers: 244
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 3.25e1
  variant carriers: 443
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 8.25e1
  variant carriers: 365
num of homozygotes: 26289
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-100134713-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134713
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134714
    reference: chr 4
allele count: 1
allele frequency: 8.671071571024747e-6
allele num: 115326
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+49_262+50insG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+49_262+50insG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+49_262+50insG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9129_166+9130insC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2604_-149+2605insG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9125_3789+9126insC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9125_407+9126insC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2604_120+2605insG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+49_262+50insG
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

4-100134717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134717
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134717
    reference: chr 4
allele count: 2
allele frequency: 1.727712508638563e-5
allele num: 115760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2601C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+46C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+46C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9129G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9133G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2601C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9129G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+46C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+46C>T
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8941
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

4-100134726-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134726
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134726
    reference: chr 4
allele count: 1
allele frequency: 8.623068432671082e-6
allele num: 115968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+37A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9138T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9142T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+37A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2592A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9138T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+37A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2592A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+37A>G
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26172
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

4-100134738-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134738
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134738
    reference: chr 4
allele count: 2
allele frequency: 1.720282126268708e-5
allele num: 116260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+25G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2580G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+25G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+25G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2580G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+25G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9150C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9154C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9150C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4235
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4269
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

4-100134741-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134741
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134741
    reference: chr 4
allele count: 1
allele frequency: 8.59136052785319e-6
allele num: 116396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2577T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+22T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9153A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+22T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+22T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9153A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+22T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2577T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9157A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

4-100134741-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134741
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134740
    reference: chr 4
allele count: 1
allele frequency: 8.59136052785319e-6
allele num: 116396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+21delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9155delT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2576delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9155delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9159delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2576delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+21delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+21delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+21delA
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: AT
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

4-100134751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134751
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134751
    reference: chr 4
allele count: 1
allele frequency: 8.542627712284299e-6
allele num: 117060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2567C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+12C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+12C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9167G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+12C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9163G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2567C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+12C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9163G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-100134761-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134761
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134761
    reference: chr 4
allele count: 1
allele frequency: 8.462527926342156e-6
allele num: 118168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2557T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9173A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9177A>G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.262+2T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2557T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.262+2T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.262+2T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9173A>G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.262+2T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
hgvs: c.262+2T>C
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

4-100134771-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134771
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134771
    reference: chr 4
allele count: 1
allele frequency: 8.383916294979712e-6
allele num: 119276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.254T>C
  hgvsp: ENSP00000426187.1:p.Val85Ala
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.254T>C
  hgvsp: ENSP00000378359.2:p.Val85Ala
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9187A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.254T>C
  hgvsp: ENSP00000378358.1:p.Val85Ala
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9183A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9183A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.254T>C
  hgvsp: ENSP00000237653.7:p.Val85Ala
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2547T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2547T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10436
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26169
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val85Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

4-100134775-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134775
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134775
    reference: chr 4
allele count: 1
allele frequency: 8.356313194618534e-6
allele num: 119670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2543A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.250A>C
  hgvsp: ENSP00000426187.1:p.Thr84Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9187T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.250A>C
  hgvsp: ENSP00000237653.7:p.Thr84Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.250A>C
  hgvsp: ENSP00000378358.1:p.Thr84Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9191T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9187T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2543A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.250A>C
  hgvsp: ENSP00000378359.2:p.Thr84Pro
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr84Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

4-100134783-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134783
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134780
    reference: chr 4
allele count: 2
allele frequency: 1.661874927292972e-5
allele num: 120346
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.239_241delAAG
  hgvsp: ENSP00000378359.2:p.Glu80del
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.239_241delAAG
  hgvsp: ENSP00000237653.7:p.Glu80del
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.239_241delAAG
  hgvsp: ENSP00000378358.1:p.Glu80del
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9198_407+9200delTCT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9202_166+9204delTCT
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.239_241delAAG
  hgvsp: ENSP00000426187.1:p.Glu80del
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2532_-149+2534delAAG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2532_120+2534delAAG
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9198_3789+9200delTCT
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26168
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu80del
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CCTT
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

4-100134786-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134786
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134786
    reference: chr 4
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.239A>G
  hgvsp: ENSP00000237653.7:p.Glu80Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.239A>G
  hgvsp: ENSP00000378359.2:p.Glu80Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9202T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2532A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.239A>G
  hgvsp: ENSP00000378358.1:p.Glu80Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9198T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.239A>G
  hgvsp: ENSP00000426187.1:p.Glu80Gly
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2532A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9198T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu80Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS

4-100134792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134792
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134792
    reference: chr 4
allele count: 61
allele frequency: 5.050254168529466e-4
allele num: 120786
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.233T>C
  hgvsp: ENSP00000378359.2:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.233T>C
  hgvsp: ENSP00000237653.7:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.233T>C
  hgvsp: ENSP00000378358.1:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9204A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2526T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9204A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9208A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.233T>C
  hgvsp: ENSP00000426187.1:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2526T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26172
  bin: 9.75e1
  variant carriers: 61
hgvs: p.Ile78Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

4-100134802-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134802
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134802
    reference: chr 4
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9218C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.223G>C
  hgvsp: ENSP00000426187.1:p.Val75Leu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.223G>C
  hgvsp: ENSP00000378358.1:p.Val75Leu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.223G>C
  hgvsp: ENSP00000378359.2:p.Val75Leu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.223G>C
  hgvsp: ENSP00000237653.7:p.Val75Leu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9214C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9214C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2516G>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2516G>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4243
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val75Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

4-100134802-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134802
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134802
    reference: chr 4
allele count: 3
allele frequency: 2.477823479855295e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.223G>A
  hgvsp: ENSP00000378358.1:p.Val75Ile
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9214C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9218C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2516G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.223G>A
  hgvsp: ENSP00000237653.7:p.Val75Ile
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2516G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.223G>A
  hgvsp: ENSP00000378359.2:p.Val75Ile
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9214C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.223G>A
  hgvsp: ENSP00000426187.1:p.Val75Ile
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val75Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-100134803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134803
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134803
    reference: chr 4
allele count: 3
allele frequency: 2.477291494632535e-5
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2515C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9215G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.222C>T
  hgvsp: ENST00000237653.7:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9215G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.222C>T
  hgvsp: ENST00000394899.2:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.222C>T
  hgvsp: ENST00000508558.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2515C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9219G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.222C>T
  hgvsp: ENST00000394897.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile74Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

4-100134808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134808
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134808
    reference: chr 4
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2510G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9220C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.217G>A
  hgvsp: ENSP00000378359.2:p.Gly73Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2510G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.217G>A
  hgvsp: ENSP00000378358.1:p.Gly73Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9224C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9220C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.217G>A
  hgvsp: ENSP00000237653.7:p.Gly73Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.217G>A
  hgvsp: ENSP00000426187.1:p.Gly73Arg
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly73Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-100134821-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134821
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134821
    reference: chr 4
allele count: 15
allele frequency: 1.237521656628991e-4
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.204C>T
  hgvsp: ENST00000394899.2:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2497C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.204C>T
  hgvsp: ENST00000394897.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.204C>T
  hgvsp: ENST00000237653.7:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9237G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9233G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.204C>T
  hgvsp: ENST00000508558.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2497C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9233G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4558
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly68Gly
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-100134824-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134824
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134824
    reference: chr 4
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.201G>A
  hgvsp: ENST00000394897.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.201G>A
  hgvsp: ENST00000394899.2:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.201G>A
  hgvsp: ENST00000237653.7:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2494G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9236C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2494G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.201G>A
  hgvsp: ENST00000508558.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9240C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9236C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4689
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8746
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12227
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu67Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

4-100134833-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134833
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134833
    reference: chr 4
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2485C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.192C>T
  hgvsp: ENST00000394899.2:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9249G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9245G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2485C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.192C>T
  hgvsp: ENST00000394897.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.192C>T
  hgvsp: ENST00000237653.7:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9245G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.192C>T
  hgvsp: ENST00000508558.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro64Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

4-100134836-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134836
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134836
    reference: chr 4
allele count: 2
allele frequency: 1.649811096629436e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2482T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.189T>A
  hgvsp: ENSP00000426187.1:p.Tyr63Ter
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.189T>A
  hgvsp: ENSP00000378358.1:p.Tyr63Ter
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9252A>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9248A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9248A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2482T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.189T>A
  hgvsp: ENSP00000237653.7:p.Tyr63Ter
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.189T>A
  hgvsp: ENSP00000378359.2:p.Tyr63Ter
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr63Ter
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-100134841-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134841
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134841
    reference: chr 4
allele count: 2
allele frequency: 1.650301179965344e-5
allele num: 121190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.184T>C
  hgvsp: ENST00000508558.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9253A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9253A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9257A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.184T>C
  hgvsp: ENST00000237653.7:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.184T>C
  hgvsp: ENST00000394897.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2477T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.184T>C
  hgvsp: ENST00000394899.2:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2477T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu62Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS

4-100134845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134845
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134845
    reference: chr 4
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.180C>T
  hgvsp: ENST00000394899.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9257G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.180C>T
  hgvsp: ENST00000508558.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2473C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2473C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9261G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.180C>T
  hgvsp: ENST00000237653.7:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.180C>T
  hgvsp: ENST00000394897.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9257G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp60Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

4-100134850-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134850
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134850
    reference: chr 4
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2468T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9262A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.175T>C
  hgvsp: ENST00000508558.1:c.175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.175T>C
  hgvsp: ENST00000237653.7:c.175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2468T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.175T>C
  hgvsp: ENST00000394899.2:c.175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.175T>C
  hgvsp: ENST00000394897.1:c.175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9262A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9266A>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4563
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu59Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

4-100134853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134853
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134853
    reference: chr 4
allele count: 2
allele frequency: 1.651200422707308e-5
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.172C>T
  hgvsp: ENSP00000237653.7:p.His58Tyr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.172C>T
  hgvsp: ENSP00000378358.1:p.His58Tyr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2465C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.172C>T
  hgvsp: ENSP00000426187.1:p.His58Tyr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2465C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9269G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9265G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.172C>T
  hgvsp: ENSP00000378359.2:p.His58Tyr
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9265G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His58Tyr
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

4-100134865-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134865
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134865
    reference: chr 4
allele count: 3
allele frequency: 2.481184351997353e-5
allele num: 120910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9281A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.160T>C
  hgvsp: ENST00000394897.1:c.160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9277A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.160T>C
  hgvsp: ENST00000508558.1:c.160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2453T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9277A>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.160T>C
  hgvsp: ENST00000394899.2:c.160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2453T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.160T>C
  hgvsp: ENST00000237653.7:c.160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4540
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu54Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

4-100134867-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134867
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134867
    reference: chr 4
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.158T>A
  hgvsp: ENSP00000426187.1:p.Val53Glu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9283A>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.158T>A
  hgvsp: ENSP00000378359.2:p.Val53Glu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2451T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.158T>A
  hgvsp: ENSP00000237653.7:p.Val53Glu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.158T>A
  hgvsp: ENSP00000378358.1:p.Val53Glu
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2451T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9279A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9279A>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val53Glu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

4-100134888-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134888
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134888
    reference: chr 4
allele count: 11
allele frequency: 9.19870883577796e-5
allele num: 119582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.137T>C
  hgvsp: ENSP00000378358.1:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.137T>C
  hgvsp: ENSP00000378359.2:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9300A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9304A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9300A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.137T>C
  hgvsp: ENSP00000237653.7:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2430T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.137T>C
  hgvsp: ENSP00000426187.1:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2430T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26109
  bin: 9.75e1
  variant carriers: 11
hgvs: p.Leu46Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

4-100134892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134892
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134892
    reference: chr 4
allele count: 9
allele frequency: 7.543880236710198e-5
allele num: 119302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.133G>A
  hgvsp: ENSP00000426187.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9304C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2426G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.133G>A
  hgvsp: ENSP00000237653.7:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9308C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9304C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.133G>A
  hgvsp: ENSP00000378359.2:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.133G>A
  hgvsp: ENSP00000378358.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2426G>A
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8928
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly45Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-100134893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134893
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134893
    reference: chr 4
allele count: 13
allele frequency: 1.090329615029774e-4
allele num: 119230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.132C>T
  hgvsp: ENST00000237653.7:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9309G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2425C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2425C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.132C>T
  hgvsp: ENST00000394897.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.132C>T
  hgvsp: ENST00000508558.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9305G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.132C>T
  hgvsp: ENST00000394899.2:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9305G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr44Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

4-100134926-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134926
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134924
    reference: chr 4
allele count: 1
allele frequency: 8.559005785887911e-6
allele num: 116836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-24_121-23delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-24_121-23delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9339_407+9340delTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-24_121-23delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9339_3789+9340delTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-24_121-23delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2390_-149+2391delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2390_120+2391delCA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9343_166+9344delTG
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8789
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26072
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4104
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7342
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: CTG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

4-100134931-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134931
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134930
    reference: chr 4
allele count: 1
allele frequency: 8.5966782435267e-6
allele num: 116324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9349delT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-28delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9345delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-28delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9345delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2386delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-28delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-28delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2386delA
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: GT
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

4-100134936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134936
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134936
    reference: chr 4
allele count: 10
allele frequency: 8.636175210722675e-5
allele num: 115792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-32G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9352C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-32G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-32G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9348C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2382G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2382G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-32G>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9348C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8584
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

4-100134937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134937
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134937
    reference: chr 4
allele count: 4
allele frequency: 3.46092614383609e-5
allele num: 115576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2381C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-33C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9349G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9353G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9349G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2381C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-33C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-33C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-33C>T
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26048
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

4-100134940-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134940
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134940
    reference: chr 4
allele count: 1
allele frequency: 8.670319761392799e-6
allele num: 115336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2378C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-36C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9352G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2378C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-36C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-36C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9352G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-36C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9356G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26037
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

4-100134942-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134942
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134942
    reference: chr 4
allele count: 4
allele frequency: 3.471077248824173e-5
allele num: 115238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9354T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2376A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-38A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9354T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2376A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-38A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9358T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-38A>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-38A>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-100134947-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134947
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134947
    reference: chr 4
allele count: 1
allele frequency: 8.714293183679872e-6
allele num: 114754
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-43T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2371T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9363A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-43T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9359A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-43T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-43T>C
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9359A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2371T>C
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

4-100134947-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134947
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134947
    reference: chr 4
allele count: 1
allele frequency: 8.714293183679872e-6
allele num: 114754
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-43T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9359A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9363A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-43T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-43T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9359A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2371T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-43T>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2371T>A
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26030
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

4-100134948-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134948
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134948
    reference: chr 4
allele count: 1
allele frequency: 8.727069624561465e-6
allele num: 114586
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-44A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-44A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-44A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9360T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9360T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9364T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2370A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-44A>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2370A>T
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4020
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

4-100134948-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100134948
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100134948
    reference: chr 4
allele count: 1
allele frequency: 8.727069624561465e-6
allele num: 114586
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.121-44A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+9364T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+2370A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.121-44A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+9360T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+2370A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+9360T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.121-44A>G
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.121-44A>G
  variant of: http://identifiers.org/hgnc/255
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-100137267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137267
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137267
    reference: chr 4
allele count: 1
allele frequency: 9.472208540143219e-6
allele num: 105572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11679G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11679G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11683G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.265C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+51C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+51C>T
  variant of: http://identifiers.org/hgnc/255
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11654
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

4-100137287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137287
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137287
    reference: chr 4
allele count: 1
allele frequency: 9.261145788957009e-6
allele num: 107978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11699G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.245C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11703G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+31C>T
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11699G>A
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14885
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

4-100137289-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137289
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137289
    reference: chr 4
allele count: 2
allele frequency: 1.861538747929038e-5
allele num: 107438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11705G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+29C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11701G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+29C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.243C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+29C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+29C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11701G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+29C>A
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+29C>A
  variant of: http://identifiers.org/hgnc/255
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7979
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16260
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

4-100137292-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137293
    reference: chr 4
allele count: 354
allele frequency: 1.710640765439258e-2
allele num: 20694
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11731dupT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11727dupT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.239dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+25dupA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11727dupT
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 241
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 487
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44305
  bin: 2.5e0
  variant carriers: 138
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 1.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 1.75e1
  variant carriers: 107
num of homozygotes: 12
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

4-100137292-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137291
    reference: chr 4
allele count: 1060
allele frequency: 5.122257659224896e-2
allele num: 20694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+25delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+25delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.239delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+25delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+25delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+25delA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11727delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11731delT
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11727delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+25delA
  variant of: http://identifiers.org/hgnc/255
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 391
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 774
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.25e1
  variant carriers: 107
num of homozygotes: 19
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: AT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

4-100137292-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137290
    reference: chr 4
allele count: 2257
allele frequency: 1.090654295931188e-1
allele num: 20694
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 407
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 809
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 44305
  bin: 2.5e0
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.75e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 1.75e1
  variant carriers: 139
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 9.25e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 129
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 2.75e1
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 6.75e1
  variant carriers: 116
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.25e1
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 6.25e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 121
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 1.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 9.75e1
  variant carriers: 878
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 107
num of homozygotes: 7
population: Latino
  type: Population
  allele count: 119
  allele frequency: 1.099815157116451e-1
  allele num: 1082
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 88
  allele frequency: 5.506883604505632e-2
  allele num: 1598
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 136
  allele frequency: 1.095008051529791e-1
  allele num: 1242
  num of homozygotes: 2
population: Other
  type: Population
  allele count: 22
  allele frequency: 1.774193548387097e-1
  allele num: 124
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: ATT
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

4-100137292-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137289
    reference: chr 4
allele count: 2914
allele frequency: 1.408137624432202e-1
allele num: 20694
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 1080
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 699
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 768
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 1.25e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 6.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 9.75e1
  variant carriers: 1951
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 2.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 1.75e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 44305
  bin: 2.5e0
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 9.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 6.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 53
num of homozygotes: 7
population: European (Finnish)
  type: Population
  allele count: 200
  allele frequency: 1.610305958132045e-1
  allele num: 1242
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 148
  allele frequency: 1.367837338262477e-1
  allele num: 1082
  num of homozygotes: 0
population: African
  type: Population
  allele count: 166
  allele frequency: 1.013431013431013e-1
  allele num: 1638
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2146
  allele frequency: 1.51382618510158e-1
  allele num: 14176
  num of homozygotes: 6
population: Other
population: East Asian
population: South Asian
reference allele: ATTT
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

4-100137292-ATTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137288
    reference: chr 4
allele count: 1785
allele frequency: 8.625688605392867e-2
allele num: 20694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506454
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506454.1:n.166+11728_166+11731delTTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000426187
  ensembl transcript: ENST00000508558
  gene symbol: ADH6
  hgvsc: ENST00000508558.1:c.120+22_120+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378358
  ensembl transcript: ENST00000394897
  gene symbol: ADH6
  hgvsc: ENST00000394897.1:c.120+22_120+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000384997
  ensembl transcript: ENST00000407820
  gene symbol: ADH6
  hgvsc: ENST00000407820.2:c.-149+22_-149+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172955
  ensembl transcript: ENST00000513262
  gene symbol: ADH6
  hgvsc: ENST00000513262.1:n.236_239delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000425275
  ensembl transcript: ENST00000507484
  gene symbol: ADH6
  hgvsc: ENST00000507484.1:c.120+22_120+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000237653
  ensembl transcript: ENST00000237653
  gene symbol: ADH6
  hgvsc: ENST00000237653.7:c.120+22_120+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172955
  ensembl protein: ENSP00000378359
  ensembl transcript: ENST00000394899
  gene symbol: ADH6
  hgvsc: ENST00000394899.2:c.120+22_120+25delAAAA
  variant of: http://identifiers.org/hgnc/255
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000500358
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000500358.2:n.3789+11724_3789+11727delTTTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000246090
  ensembl transcript: ENST00000506160
  gene symbol: RP11-696N14.1
  hgvsc: ENST00000506160.1:n.407+11724_407+11727delTTTT
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 474
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 306
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 426
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 44305
  bin: 2.5e0
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 27
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: ATTTT
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

4-100137292-ATTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 100137292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 100137287
    reference: chr 4
allele count: 550
allele frequency: 2.65777520054122e-2
allele num: 20694
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 2.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 1.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 3.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 1.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 44305
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 1.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 9.75e1
  variant carriers: 392
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 10
num of homozygotes: 0
reference allele: ATTTTT

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6964
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507886245061673e-5
allele num: 66318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.423e0

QD
type: SiteQuality
SIO_000300: 1.317e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

DP
type: SiteQuality
SIO_000300: 1.999037e6

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3860
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8384
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6960
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.52338590512952e-5
allele num: 66322
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

FS
type: SiteQuality
SIO_000300: 5.448e0

MQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.824e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

DP
type: SiteQuality
SIO_000300: 2.000825e6

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 1183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2707
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31318
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.426595486532395e-4
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.517e-1

DP
type: SiteQuality
SIO_000300: 2.002352e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

QD
type: SiteQuality
SIO_000300: 1.582e1

MQ
type: SiteQuality
SIO_000300: 5.734e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 1.5043e1

GenotypeQuality
all individuals: 1749
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 32279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7095
bin: 9.75e1
variant carriers: 410

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3840
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 397
allele frequency: 3.954971109782825e-2
allele num: 10038
num of homozygotes: 9

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.512499623958364e-5
allele num: 66482
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.834061135371179e-3
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.028789e6

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8452
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32505
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6737
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.003797e6

FS
type: SiteQuality
SIO_000300: 1.234e0

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2698
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

FS
type: SiteQuality
SIO_000300: 3.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.538e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.007533e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
all individuals: 6734
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.008149e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.68e-1

FS
type: SiteQuality
SIO_000300: 5.319e0

VQSLOD
type: SiteQuality
SIO_000300: -7.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 1.677e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.5e-2

GenotypeQuality
all individuals: 1750
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6767
bin: 9.75e1
variant carriers: 101

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.089807296085323e-4
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 86
allele frequency: 9.967547519703291e-3
allele num: 8628
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

DP
type: SiteQuality
SIO_000300: 2.01555e6

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8467
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32810
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.741258741258741e-5
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.215e1

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.271e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

FS
type: SiteQuality
SIO_000300: 9.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.062e0

DP
type: SiteQuality
SIO_000300: 2.005549e6

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819284414796847e-4
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 5.752e0

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 2.004645e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeQuality
all individuals: 3841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6664
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.781173164734808e-5
allele num: 11388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 6.284e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

QD
type: SiteQuality
SIO_000300: 1.511e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.999148e6

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 1.99332e6

FS
type: SiteQuality
SIO_000300: 3.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.444e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 4.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.73e-1

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6658
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.069618524475737e-5
allele num: 65902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.789e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.213e1

FS
type: SiteQuality
SIO_000300: 2.113e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.964659e6

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6649
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2598
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29835
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168497312456181e-4
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.026e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

QD
type: SiteQuality
SIO_000300: 1.466e1

VQSLOD
type: SiteQuality
SIO_000300: -5.052e-1

FS
type: SiteQuality
SIO_000300: 1.3112e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.953677e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.488e0

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6641
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.016942315449778e-4
allele num: 9916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

DP
type: SiteQuality
SIO_000300: 1.885103e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.644e1

GenotypeQuality
all individuals: 1089
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6641
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1735
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3343
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7235
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058478101296795e-5
allele num: 65392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

QD
type: SiteQuality
SIO_000300: 1.644e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

DP
type: SiteQuality
SIO_000300: 1.885103e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
all individuals: 491
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6628
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4678
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556226462074761e-5
allele num: 64258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.7071e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.467e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

FS
type: SiteQuality
SIO_000300: 4.619e0

VQSLOD
type: SiteQuality
SIO_000300: -7.32e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.242e1

GenotypeQuality
all individuals: 1894
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2700
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4068
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557486839236208e-5
allele num: 64206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -5.026e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.701336e6

QD
type: SiteQuality
SIO_000300: 1.708e1

FS
type: SiteQuality
SIO_000300: 1.289e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
all individuals: 1106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6628
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8569
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 8.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.220452848967405e-5
allele num: 16076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63846
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 1.689724e6

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 3.114e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 10513
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10680
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8375
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.639947944281101e-5
allele num: 41494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.256849e6

FS
type: SiteQuality
SIO_000300: 8.132e0

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

VQSLOD
type: SiteQuality
SIO_000300: -2.806e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.54e-2

QD
type: SiteQuality
SIO_000300: 3.371e1

GenotypeQuality
all individuals: 219
bin: 4.25e1
variant carriers: 168

GenotypeQuality
all individuals: 288
bin: 4.75e1
variant carriers: 217

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 447

GenotypeQuality
all individuals: 740
bin: 2.25e1
variant carriers: 455

GenotypeQuality
all individuals: 351
bin: 2.5e0
variant carriers: 18

GenotypeQuality
all individuals: 1104
bin: 6.25e1
variant carriers: 238

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 181

GenotypeQuality
all individuals: 416
bin: 1.75e1
variant carriers: 289

GenotypeQuality
all individuals: 931
bin: 9.25e1
variant carriers: 457

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 373

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 288

GenotypeQuality
all individuals: 50396
bin: 9.75e1
variant carriers: 47390

GenotypeQuality
all individuals: 563
bin: 7.25e1
variant carriers: 222

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 217

African
type: Population
allele count: 8951
allele frequency: 8.670089112746997e-1
allele num: 10324
num of homozygotes: 3882

European (Finnish)
type: Population
allele count: 3803
allele frequency: 5.772616879174256e-1
allele num: 6588
num of homozygotes: 1109

Latino
type: Population
allele count: 8873
allele frequency: 7.726401950539882e-1
allele num: 11484
num of homozygotes: 3439

Other
type: Population
allele count: 537
allele frequency: 6.377672209026128e-1
allele num: 842
num of homozygotes: 175

European (Non-Finnish)
type: Population
allele count: 38364
allele frequency: 5.899793928582413e-1
allele num: 65026
num of homozygotes: 11272

East Asian
type: Population
allele count: 8101
allele frequency: 9.411013011152416e-1
allele num: 8608
num of homozygotes: 3816

South Asian
type: Population
allele count: 8048
allele frequency: 6.46218082543761e-1
allele num: 12454
num of homozygotes: 2596

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 2.936e1

DP
type: SiteQuality
SIO_000300: 3.291774e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 5.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

GenotypeQuality
all individuals: 351
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50396
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537846399901578e-5
allele num: 65026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.291774e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 2.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26176
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4135
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322340919647004e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.691e0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

MQ
type: SiteQuality
SIO_000300: 5.753e1

DP
type: SiteQuality
SIO_000300: 2.450786e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.252e1

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

FS
type: SiteQuality
SIO_000300: 3.588e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 4146
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7281
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65294
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

FS
type: SiteQuality
SIO_000300: 2.592e0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
SIO_000300: 2.453749e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 192
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7752
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26172
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.321262766945218e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 2.460046e6

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 4.439e0

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 7.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.342e0

GenotypeQuality
all individuals: 4161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13018
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
SIO_000300: 9.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.462189e6

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.406e0

MQ
type: SiteQuality
SIO_000300: 5.729e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.48e-1

GenotypeQuality
all individuals: 4313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.406e0

FS
type: SiteQuality
SIO_000300: 6.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.48e-1

DP
type: SiteQuality
SIO_000300: 2.462189e6

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.729e1

QD
type: SiteQuality
SIO_000300: 9.19e0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8537
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26168
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52522725886157e-5
allele num: 65564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.471897e6

MQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

FS
type: SiteQuality
SIO_000300: 7.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.553e-1

QD
type: SiteQuality
SIO_000300: 2.067e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.91e-1

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1619
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26168
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4173
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.62e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.485362e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.906e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4188
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.792e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.148e0

VQSLOD
type: SiteQuality
SIO_000300: -4.191e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

DP
type: SiteQuality
SIO_000300: 2.499409e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 875
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26168
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4192
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4453
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.232e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.422e0

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 1.594e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

DP
type: SiteQuality
SIO_000300: 2.504506e6

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4473
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01331886940276e-5
allele num: 66372
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.486e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 2.513049e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.809e1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.714e1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11456
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15972
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.734e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.675e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 2.514982e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

FS
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11827
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.562008469449486e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.421559191530317e-4
allele num: 66496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

DP
type: SiteQuality
SIO_000300: 2.52164e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.388e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4531
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26140
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 2.522028e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4531
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26140
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.522028e6

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.291e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

GenotypeQuality
all individuals: 4323
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26140
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00390507659958e-5
allele num: 66580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.522346e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.193e0

QD
type: SiteQuality
SIO_000300: 1.232e1

FS
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.241e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.37e-1

DP
type: SiteQuality
SIO_000300: 2.523022e6

MQ
type: SiteQuality
SIO_000300: 5.876e1

QD
type: SiteQuality
SIO_000300: 1.296e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.648e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26139
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2477
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.951307375941881e-4
allele num: 66622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

MQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.524516e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.513e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26132
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 6.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.319e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e0

MQRankSum
type: SiteQuality
SIO_000300: -1.035e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.663e0

DP
type: SiteQuality
SIO_000300: 2.523912e6

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4323
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.743e0

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.697e1

MQ
type: SiteQuality
SIO_000300: 5.747e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.135e0

DP
type: SiteQuality
SIO_000300: 2.523734e6

FS
type: SiteQuality
SIO_000300: 7.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26129
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.419e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 1.126e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 2.523681e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4561
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26130
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.337e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

VQSLOD
type: SiteQuality
SIO_000300: 9.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

DP
type: SiteQuality
SIO_000300: 2.523243e6

FS
type: SiteQuality
SIO_000300: 2.336e0

GenotypeQuality
all individuals: 12130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26128
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

QD
type: SiteQuality
SIO_000300: 1.047e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.105e0

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

DP
type: SiteQuality
SIO_000300: 2.522997e6

FS
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26126
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

FS
type: SiteQuality
SIO_000300: 2.524e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

VQSLOD
type: SiteQuality
SIO_000300: -3.626e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.527e1

DP
type: SiteQuality
SIO_000300: 2.522405e6

GenotypeQuality
all individuals: 4559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26127
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4194
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

FS
type: SiteQuality
SIO_000300: 2.645e0

VQSLOD
type: SiteQuality
SIO_000300: -1.137e0

QD
type: SiteQuality
SIO_000300: 1.187e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 2.522219e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.68e0

GenotypeQuality
all individuals: 393
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26124
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11831
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.153846153846154e-5
allele num: 16250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 4.747e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

DP
type: SiteQuality
SIO_000300: 2.51889e6

QD
type: SiteQuality
SIO_000300: 1.34e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26122
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4532
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 6.366e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.624e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.517782e6

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 11
allele frequency: 1.059118043520123e-3
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 1.826e0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 1.309e1

DP
type: SiteQuality
SIO_000300: 2.49372e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26104
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4343
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9587
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.982029598308668e-4
allele num: 15136
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.538303279680504e-5
allele num: 66104
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

DP
type: SiteQuality
SIO_000300: 2.488326e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

FS
type: SiteQuality
SIO_000300: 1.824e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

QD
type: SiteQuality
SIO_000300: 1.323e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 1930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26100
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9576
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.361696977032711e-4
allele num: 66094
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.633939233116624e-5
allele num: 15074
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.487338e6

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.311e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

GenotypeQuality
all individuals: 4089
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527417137620284e-5
allele num: 65470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

DP
type: SiteQuality
SIO_000300: 2.443233e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.877e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.08e0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

GenotypeQuality
all individuals: 2325
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4079
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26071
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6959
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4217
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529987760097919e-5
allele num: 65360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.434546e6

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 1.447e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.138e0

MQ
type: SiteQuality
SIO_000300: 6.032e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.59e-1

GenotypeQuality
all individuals: 258
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26056
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.806690003889537e-4
allele num: 10284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.861635220125786e-5
allele num: 12720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533083951677194e-5
allele num: 65228
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 6.293e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 2.428933e6

GenotypeQuality
all individuals: 4050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6723
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.136098668466589e-5
allele num: 65188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

QD
type: SiteQuality
SIO_000300: 9.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

FS
type: SiteQuality
SIO_000300: 4.966e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

DP
type: SiteQuality
SIO_000300: 2.426686e6

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535437906891045e-5
allele num: 65128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.421665e6

QD
type: SiteQuality
SIO_000300: 1.185e1

MQ
type: SiteQuality
SIO_000300: 5.86e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.336e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 4.038e0

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.063e0

GenotypeQuality
all individuals: 6405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26038
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3914
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.895597974289053e-4
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.41881e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 2.621e0

QD
type: SiteQuality
SIO_000300: 1.504e1

MQRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

GenotypeQuality
all individuals: 439
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4028
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538982424820709e-5
allele num: 64978
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

QD
type: SiteQuality
SIO_000300: 1.298e1

FS
type: SiteQuality
SIO_000300: 2.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 2.411061e6

GenotypeQuality
all individuals: 2745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3862
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.327781479013991e-5
allele num: 12008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64978
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.298e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

VQSLOD
type: SiteQuality
SIO_000300: -1.68e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 2.411061e6

GenotypeQuality
all individuals: 650
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4230
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26029
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.408578e6

FS
type: SiteQuality
SIO_000300: 3.25e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

GenotypeQuality
all individuals: 2261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26029
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4230
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 3.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 2.408578e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

GenotypeQuality
all individuals: 1486
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4769
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3759
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2558
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4553
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5458
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.727473742399115e-5
allele num: 57888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.415002e6

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0

VQSLOD
type: SiteQuality
SIO_000300: -1.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

MQ
type: SiteQuality
SIO_000300: 5.822e1

QD
type: SiteQuality
SIO_000300: 1.439e1

GenotypeQuality
all individuals: 874
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 557
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6517
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5280
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.034327518289252e-5
allele num: 14216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.671e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.149e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

DP
type: SiteQuality
SIO_000300: 1.559049e6

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

GenotypeQuality
all individuals: 1276
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5504
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10740
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.413827230312456e-4
allele num: 14146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58964
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.028e0

FS
type: SiteQuality
SIO_000300: 3.291e0

QD
type: SiteQuality
SIO_000300: 1.234e1

MQRankSum
type: SiteQuality
SIO_000300: -1.243e0

VQSLOD
type: SiteQuality
SIO_000300: -1.848e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.547e0

MQ
type: SiteQuality
SIO_000300: 5.353e1

DP
type: SiteQuality
SIO_000300: 1.599888e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.02e-1

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 473
bin: 4.25e1
variant carriers: 41

GenotypeQuality
all individuals: 503
bin: 3.75e1
variant carriers: 69

GenotypeQuality
all individuals: 1060
bin: 2.25e1
variant carriers: 85

GenotypeQuality
all individuals: 724
bin: 2.75e1
variant carriers: 100

GenotypeQuality
all individuals: 319
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 691
bin: 3.25e1
variant carriers: 89

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 22

GenotypeQuality
all individuals: 415
bin: 4.75e1
variant carriers: 35

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 270
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 271
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 405
bin: 6.25e1
variant carriers: 15

GenotypeQuality
all individuals: 259
bin: 9.25e1
variant carriers: 11

GenotypeQuality
all individuals: 4790
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 450
bin: 5.25e1
variant carriers: 30

Latino
type: Population
allele count: 17
allele frequency: 1.571164510166359e-2
allele num: 1082
num of homozygotes: 2

Other
type: Population
allele count: 2
allele frequency: 1.612903225806452e-2
allele num: 124
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 203
allele frequency: 1.431997742663657e-2
allele num: 14176
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 25
allele frequency: 2.012882447665056e-2
allele num: 1242
num of homozygotes: 0

African
type: Population
allele count: 51
allele frequency: 3.113553113553114e-2
allele num: 1638
num of homozygotes: 1

East Asian
type: Population
allele count: 28
allele frequency: 3.357314148681055e-2
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 28
allele frequency: 1.752190237797246e-2
allele num: 1598
num of homozygotes: 4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

QD
type: SiteQuality
SIO_000300: 5.43e0

MQ
type: SiteQuality
SIO_000300: 5.533e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.878498e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 1.1033e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.707e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

GenotypeQuality
all individuals: 691
bin: 3.25e1
variant carriers: 124

GenotypeQuality
all individuals: 724
bin: 2.75e1
variant carriers: 128

GenotypeQuality
all individuals: 1060
bin: 2.25e1
variant carriers: 114

GenotypeQuality
all individuals: 44305
bin: 2.5e0
variant carriers: 173

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 22

GenotypeQuality
all individuals: 906
bin: 1.75e1
variant carriers: 138

GenotypeQuality
all individuals: 271
bin: 7.25e1
variant carriers: 35

GenotypeQuality
all individuals: 1469
bin: 7.5e0
variant carriers: 154

GenotypeQuality
all individuals: 319
bin: 6.75e1
variant carriers: 63

GenotypeQuality
all individuals: 405
bin: 6.25e1
variant carriers: 74

GenotypeQuality
all individuals: 450
bin: 5.25e1
variant carriers: 107

GenotypeQuality
all individuals: 968
bin: 1.25e1
variant carriers: 143

GenotypeQuality
all individuals: 4790
bin: 9.75e1
variant carriers: 86

GenotypeQuality
all individuals: 270
bin: 7.75e1
variant carriers: 43

GenotypeQuality
all individuals: 259
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 79

European (Non-Finnish)
type: Population
allele count: 866
allele frequency: 6.108916478555305e-2
allele num: 14176
num of homozygotes: 18

African
type: Population
allele count: 52
allele frequency: 3.174603174603174e-2
allele num: 1638
num of homozygotes: 0

South Asian
type: Population
allele count: 32
allele frequency: 2.002503128911139e-2
allele num: 1598
num of homozygotes: 0

Latino
type: Population
allele count: 29
allele frequency: 2.680221811460259e-2
allele num: 1082
num of homozygotes: 0

East Asian
type: Population
allele count: 35
allele frequency: 4.196642685851319e-2
allele num: 834
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 3.225806451612903e-2
allele num: 124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 3.381642512077294e-2
allele num: 1242
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.707e-1

MQ
type: SiteQuality
SIO_000300: 5.533e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

FS
type: SiteQuality
SIO_000300: 1.1033e1

QD
type: SiteQuality
SIO_000300: 5.43e0

DP
type: SiteQuality
SIO_000300: 1.878498e6

European (Non-Finnish)
type: Population
allele count: 1677
allele frequency: 1.18298532731377e-1
allele num: 14176
num of homozygotes: 4

African
type: Population
allele count: 130
allele frequency: 7.936507936507936e-2
allele num: 1638
num of homozygotes: 1

East Asian
type: Population
allele count: 85
allele frequency: 1.019184652278178e-1
allele num: 834
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1033e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.533e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.707e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

DP
type: SiteQuality
SIO_000300: 1.878498e6

QD
type: SiteQuality
SIO_000300: 5.43e0

Other
type: Population
allele count: 16
allele frequency: 1.290322580645161e-1
allele num: 124
num of homozygotes: 0

East Asian
type: Population
allele count: 100
allele frequency: 1.199040767386091e-1
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 138
allele frequency: 8.635794743429287e-2
allele num: 1598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1033e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.707e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 5.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.878498e6

MQ
type: SiteQuality
SIO_000300: 5.533e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

GenotypeQuality
all individuals: 473
bin: 4.25e1
variant carriers: 33

GenotypeQuality
all individuals: 415
bin: 4.75e1
variant carriers: 35

GenotypeQuality
all individuals: 405
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 906
bin: 1.75e1
variant carriers: 52

GenotypeQuality
all individuals: 724
bin: 2.75e1
variant carriers: 36

GenotypeQuality
all individuals: 319
bin: 6.75e1
variant carriers: 33

GenotypeQuality
all individuals: 450
bin: 5.25e1
variant carriers: 38

GenotypeQuality
all individuals: 1469
bin: 7.5e0
variant carriers: 56

GenotypeQuality
all individuals: 259
bin: 9.25e1
variant carriers: 30

GenotypeQuality
all individuals: 968
bin: 1.25e1
variant carriers: 45

GenotypeQuality
all individuals: 1060
bin: 2.25e1
variant carriers: 32

GenotypeQuality
all individuals: 691
bin: 3.25e1
variant carriers: 39

GenotypeQuality
all individuals: 503
bin: 3.75e1
variant carriers: 34

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 30

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 4790
bin: 9.75e1
variant carriers: 1331

South Asian
type: Population
allele count: 97
allele frequency: 6.07008760951189e-2
allele num: 1598
num of homozygotes: 0

Other
type: Population
allele count: 12
allele frequency: 9.677419354838709e-2
allele num: 124
num of homozygotes: 0

Latino
type: Population
allele count: 93
allele frequency: 8.595194085027727e-2
allele num: 1082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 126
allele frequency: 1.014492753623188e-1
allele num: 1242
num of homozygotes: 0

African
type: Population
allele count: 104
allele frequency: 6.349206349206349e-2
allele num: 1638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1303
allele frequency: 9.191591422121896e-2
allele num: 14176
num of homozygotes: 0

East Asian
type: Population
allele count: 50
allele frequency: 5.995203836930456e-2
allele num: 834
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1033e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQ
type: SiteQuality
SIO_000300: 5.533e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.707e-1

DP
type: SiteQuality
SIO_000300: 1.878498e6

QD
type: SiteQuality
SIO_000300: 5.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1