2-224862981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224862981
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224862981
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.374C>T
  hgvsp: ENSP00000415786.2:p.Ala125Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.338C>T
  hgvsp: ENSP00000258405.4:p.Ala113Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.338C>T
  hgvsp: ENSP00000408452.1:p.Ala113Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.338C>T
  hgvsp: ENSP00000386969.3:p.Ala113Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.338C>T
  hgvsp: ENSP00000386412.1:p.Ala113Val
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28721
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11157
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3571
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala125Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

2-224862983-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224862983
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224862983
    reference: chr 2
allele count: 7
allele frequency: 5.775577557755776e-5
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.336C>A
  hgvsp: ENSP00000386969.3:p.Asn112Lys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.372C>A
  hgvsp: ENSP00000415786.2:p.Asn124Lys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.336C>A
  hgvsp: ENSP00000258405.4:p.Asn112Lys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.336C>A
  hgvsp: ENSP00000386412.1:p.Asn112Lys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.336C>A
  hgvsp: ENSP00000408452.1:p.Asn112Lys
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9794
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11025
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28654
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn124Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

2-224862990-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224862990
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224862990
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.365T>C
  hgvsp: ENSP00000415786.2:p.Val122Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.329T>C
  hgvsp: ENSP00000386969.3:p.Val110Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.329T>C
  hgvsp: ENSP00000408452.1:p.Val110Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.329T>C
  hgvsp: ENSP00000386412.1:p.Val110Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.329T>C
  hgvsp: ENSP00000258405.4:p.Val110Ala
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17318
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2052
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genotype quality: GenotypeQuality
  all individuals: 3562
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genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val122Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

2-224863000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863000
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863000
    reference: chr 2
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.319A>G
  hgvsp: ENSP00000258405.4:p.Ile107Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.319A>G
  hgvsp: ENSP00000386969.3:p.Ile107Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.319A>G
  hgvsp: ENSP00000386412.1:p.Ile107Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.319A>G
  hgvsp: ENSP00000408452.1:p.Ile107Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.355A>G
  hgvsp: ENSP00000415786.2:p.Ile119Val
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile119Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

2-224863019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863019
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863019
    reference: chr 2
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.300C>T
  hgvsp: ENST00000432738.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.336C>T
  hgvsp: ENST00000447280.2:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.300C>T
  hgvsp: ENST00000258405.4:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.300C>T
  hgvsp: ENST00000409304.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.300C>T
  hgvsp: ENST00000409840.3:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11079
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val112Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

2-224863021-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863021
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863021
    reference: chr 2
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.298G>A
  hgvsp: ENSP00000408452.1:p.Val100Ile
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.298G>A
  hgvsp: ENSP00000258405.4:p.Val100Ile
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.334G>A
  hgvsp: ENSP00000415786.2:p.Val112Ile
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.298G>A
  hgvsp: ENSP00000386412.1:p.Val100Ile
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.298G>A
  hgvsp: ENSP00000386969.3:p.Val100Ile
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val112Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

2-224863022-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863022
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863022
    reference: chr 2
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.297C>A
  hgvsp: ENST00000409304.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.333C>A
  hgvsp: ENST00000447280.2:c.333C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.297C>A
  hgvsp: ENST00000432738.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.297C>A
  hgvsp: ENST00000258405.4:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.297C>A
  hgvsp: ENST00000409840.3:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8197
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile111Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

2-224863029-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863029
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863029
    reference: chr 2
allele count: 9
allele frequency: 7.418519922847392e-5
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.290A>G
  hgvsp: ENSP00000258405.4:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.290A>G
  hgvsp: ENSP00000386969.3:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.290A>G
  hgvsp: ENSP00000386412.1:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.326A>G
  hgvsp: ENSP00000415786.2:p.Lys109Arg
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.290A>G
  hgvsp: ENSP00000408452.1:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys109Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

2-224863056-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863056
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863056
    reference: chr 2
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.263T>C
  hgvsp: ENSP00000408452.1:p.Val88Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.263T>C
  hgvsp: ENSP00000386412.1:p.Val88Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.263T>C
  hgvsp: ENSP00000258405.4:p.Val88Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.263T>C
  hgvsp: ENSP00000386969.3:p.Val88Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.299T>C
  hgvsp: ENSP00000415786.2:p.Val100Ala
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8112
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val100Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-224863063-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863063
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863063
    reference: chr 2
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-4T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-4T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-4T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-4T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-4T>G
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8090
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28213
  bin: 6.25e1
  variant carriers: 0
hgvs: c.296-4T>G
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-224863086-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863086
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863086
    reference: chr 2
allele count: 1
allele frequency: 8.323899580475461e-6
allele num: 120136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-27T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-27T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-27T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-27T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-27T>G
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9076
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7530
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-224863090-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863090
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863090
    reference: chr 2
allele count: 5
allele frequency: 4.179204279505182e-5
allele num: 119640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-31G>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-31G>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-31G>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-31G>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-31G>C
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

2-224863090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863090
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863090
    reference: chr 2
allele count: 24491
allele frequency: 2.047057840187228e-1
allele num: 119640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-31G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-31G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-31G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-31G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-31G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 2.25e1
  variant carriers: 1369
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 1.75e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 1.25e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.75e1
  variant carriers: 400
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.75e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.25e1
  variant carriers: 308
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 4.75e1
  variant carriers: 2279
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 708
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.75e1
  variant carriers: 1005
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.25e1
  variant carriers: 3196
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 3.75e1
  variant carriers: 3402
genotype depth: GenotypeDepth
  all individuals: 14678
  bin: 2.75e1
  variant carriers: 2320
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.25e1
  variant carriers: 1452
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 582
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 2906
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 7.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.25e1
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 43
num of homozygotes: 2986
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

2-224863093-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863093
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863093
    reference: chr 2
allele count: 101
allele frequency: 8.484828119224437e-4
allele num: 119036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-34G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-34G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-34G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-34G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-34G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12744
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18258
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 9.75e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

2-224863095-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863095
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863095
    reference: chr 2
allele count: 2
allele frequency: 1.682566924099406e-5
allele num: 118866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-36T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-36T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-36T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-36T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-36T>C
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9832
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17263
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-224863099-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863099
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863099
    reference: chr 2
allele count: 2
allele frequency: 1.688419133165617e-5
allele num: 118454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-40C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-40C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-40C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-40C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-40C>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22389
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-224863103-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224863103
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224863103
    reference: chr 2
allele count: 4
allele frequency: 3.395989336593483e-5
allele num: 117786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.260-44G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.260-44G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.260-44G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.296-44G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.260-44G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13840
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6775
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18220
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

2-224866320-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866320
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866320
    reference: chr 2
allele count: 1
allele frequency: 8.740494712000699e-6
allele num: 114410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+39T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.512T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+39T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+39T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+39T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+39T>C
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

2-224866327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866327
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866327
    reference: chr 2
allele count: 1
allele frequency: 8.694744896184747e-6
allele num: 115012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+32C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+32C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+32C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+32C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+32C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.505C>T
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
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genotype quality: GenotypeQuality
  all individuals: 1600
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3617
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1985
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

2-224866329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866329
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866329
    reference: chr 2
allele count: 1
allele frequency: 8.683872312341519e-6
allele num: 115156
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+30G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+30G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+30G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+30G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.503G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+30G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10476
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7719
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3622
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

2-224866332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866332
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866332
    reference: chr 2
allele count: 17
allele frequency: 1.472703016442296e-4
allele num: 115434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+27G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.500G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+27G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+27G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+27G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+27G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18580
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3642
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 33147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

2-224866333-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866333
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866333
    reference: chr 2
allele count: 10
allele frequency: 8.641249870381252e-5
allele num: 115724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.499C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+26C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+26C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+26C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+26C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+26C>A
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18978
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16943
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10721
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

2-224866334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866334
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866334
    reference: chr 2
allele count: 1
allele frequency: 8.618757864616552e-6
allele num: 116026
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+25G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+25G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+25G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+25G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+25G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.498G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-224866336-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866336
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866336
    reference: chr 2
allele count: 2
allele frequency: 1.715089356155456e-5
allele num: 116612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+23T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+23T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+23T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.496T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+23T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+23T>G
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17230
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

2-224866339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866339
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866339
    reference: chr 2
allele count: 1
allele frequency: 8.535627710061798e-6
allele num: 117156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+20C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+20C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+20C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+20C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+20C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.493C>T
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

2-224866343-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866343
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866343
    reference: chr 2
allele count: 2
allele frequency: 1.695547492285259e-5
allele num: 117956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.489T>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+16T>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+16T>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+16T>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+16T>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+16T>A
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21070
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

2-224866345-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866345
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866345
    reference: chr 2
allele count: 28
allele frequency: 2.366423826507328e-4
allele num: 118322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.487A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.259+14A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.259+14A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.259+14A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.259+14A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.295+14A>G
  variant of: http://identifiers.org/hgnc/8951
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21326
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17793
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37105
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

2-224866366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866366
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866366
    reference: chr 2
allele count: 2
allele frequency: 1.657605092162843e-5
allele num: 120656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.252C>T
  hgvsp: ENST00000409304.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.288C>T
  hgvsp: ENST00000447280.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.466C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.252C>T
  hgvsp: ENST00000409840.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.252C>T
  hgvsp: ENST00000454956.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.252C>T
  hgvsp: ENST00000258405.4:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.252C>T
  hgvsp: ENST00000432738.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18892
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly96Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-224866368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866368
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866368
    reference: chr 2
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.250G>A
  hgvsp: ENSP00000386412.1:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.286G>A
  hgvsp: ENSP00000415786.2:p.Gly96Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.250G>A
  hgvsp: ENSP00000386969.3:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.250G>A
  hgvsp: ENSP00000399655.1:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.250G>A
  hgvsp: ENSP00000408452.1:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.250G>A
  hgvsp: ENSP00000258405.4:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.464G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly96Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

2-224866369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866369
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866369
    reference: chr 2
allele count: 3
allele frequency: 2.482827112472068e-5
allele num: 120830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.249C>T
  hgvsp: ENST00000409304.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.285C>T
  hgvsp: ENST00000447280.2:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.249C>T
  hgvsp: ENST00000409840.3:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.249C>T
  hgvsp: ENST00000432738.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.463C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.249C>T
  hgvsp: ENST00000454956.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.249C>T
  hgvsp: ENST00000258405.4:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr95Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

2-224866372-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866372
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866371
    reference: chr 2
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.245delG
  hgvsp: ENSP00000386969.3:p.Arg82AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.281delG
  hgvsp: ENSP00000415786.2:p.Arg94AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.245delG
  hgvsp: ENSP00000386412.1:p.Arg82AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.459delG
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.245delG
  hgvsp: ENSP00000399655.1:p.Arg82AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.245delG
  hgvsp: ENSP00000408452.1:p.Arg82AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.245delG
  hgvsp: ENSP00000258405.4:p.Arg82AsnfsTer4
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg94AsnfsTer4
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: TC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

2-224866380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866380
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866380
    reference: chr 2
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.238G>A
  hgvsp: ENSP00000399655.1:p.Val80Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.238G>A
  hgvsp: ENSP00000386969.3:p.Val80Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.274G>A
  hgvsp: ENSP00000415786.2:p.Val92Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.238G>A
  hgvsp: ENSP00000386412.1:p.Val80Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.238G>A
  hgvsp: ENSP00000408452.1:p.Val80Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.452G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.238G>A
  hgvsp: ENSP00000258405.4:p.Val80Met
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19195
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val92Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

2-224866386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866386
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866386
    reference: chr 2
allele count: 3
allele frequency: 2.476309967973058e-5
allele num: 121148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.232G>A
  hgvsp: ENSP00000399655.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.232G>A
  hgvsp: ENSP00000386969.3:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.446G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.232G>A
  hgvsp: ENSP00000258405.4:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.232G>A
  hgvsp: ENSP00000386412.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.232G>A
  hgvsp: ENSP00000408452.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.268G>A
  hgvsp: ENSP00000415786.2:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8730
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala90Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-224866387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866387
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866387
    reference: chr 2
allele count: 17770
allele frequency: 1.466389397765345e-1
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.231C>T
  hgvsp: ENST00000454956.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.231C>T
  hgvsp: ENST00000409304.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.445C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.231C>T
  hgvsp: ENST00000258405.4:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.267C>T
  hgvsp: ENST00000447280.2:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.231C>T
  hgvsp: ENST00000432738.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.231C>T
  hgvsp: ENST00000409840.3:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.75e1
  variant carriers: 1701
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 5.25e1
  variant carriers: 1654
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.25e1
  variant carriers: 1288
genotype depth: GenotypeDepth
  all individuals: 15530
  bin: 2.75e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 815
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.25e1
  variant carriers: 434
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 9.75e1
  variant carriers: 1406
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 6.25e1
  variant carriers: 1654
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 3.75e1
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 15684
  bin: 2.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 9.25e1
  variant carriers: 492
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 4.75e1
  variant carriers: 1372
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 1057
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 8.75e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 7.75e1
  variant carriers: 1077
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 1547
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 6
hgvs: p.Leu89Leu
num of homozygotes: 1500
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

2-224866395-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866395
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866395
    reference: chr 2
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.223A>T
  hgvsp: ENSP00000386412.1:p.Lys75Ter
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.437A>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.223A>T
  hgvsp: ENSP00000386969.3:p.Lys75Ter
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.223A>T
  hgvsp: ENSP00000399655.1:p.Lys75Ter
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.223A>T
  hgvsp: ENSP00000258405.4:p.Lys75Ter
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.223A>T
  hgvsp: ENSP00000408452.1:p.Lys75Ter
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.259A>T
  hgvsp: ENSP00000415786.2:p.Lys87Ter
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys87Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-224866407-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866407
    reference: chr 2
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.211G>T
  hgvsp: ENSP00000386412.1:p.Gly71Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.211G>T
  hgvsp: ENSP00000408452.1:p.Gly71Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.211G>T
  hgvsp: ENSP00000386969.3:p.Gly71Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.247G>T
  hgvsp: ENSP00000415786.2:p.Gly83Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.211G>T
  hgvsp: ENSP00000258405.4:p.Gly71Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.425G>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.211G>T
  hgvsp: ENSP00000399655.1:p.Gly71Cys
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6820
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly83Cys
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

2-224866407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866407
    reference: chr 2
allele count: 6
allele frequency: 4.945353840067256e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.211G>A
  hgvsp: ENSP00000408452.1:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.211G>A
  hgvsp: ENSP00000386412.1:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.211G>A
  hgvsp: ENSP00000399655.1:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.211G>A
  hgvsp: ENSP00000258405.4:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.211G>A
  hgvsp: ENSP00000386969.3:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.247G>A
  hgvsp: ENSP00000415786.2:p.Gly83Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.425G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly83Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

2-224866408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866408
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866408
    reference: chr 2
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.424C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.246C>T
  hgvsp: ENST00000447280.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.210C>T
  hgvsp: ENST00000409840.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.210C>T
  hgvsp: ENST00000454956.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.210C>T
  hgvsp: ENST00000432738.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.210C>T
  hgvsp: ENST00000409304.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.210C>T
  hgvsp: ENST00000258405.4:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp82Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-224866410-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866410
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866410
    reference: chr 2
allele count: 2
allele frequency: 1.648261084555794e-5
allele num: 121340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.244G>T
  hgvsp: ENSP00000415786.2:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.422G>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.208G>T
  hgvsp: ENSP00000258405.4:p.Asp70Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.208G>T
  hgvsp: ENSP00000386412.1:p.Asp70Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.208G>T
  hgvsp: ENSP00000408452.1:p.Asp70Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.208G>T
  hgvsp: ENSP00000399655.1:p.Asp70Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.208G>T
  hgvsp: ENSP00000386969.3:p.Asp70Tyr
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33814
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp82Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

2-224866411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866411
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866411
    reference: chr 2
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.207G>A
  hgvsp: ENST00000258405.4:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.207G>A
  hgvsp: ENST00000432738.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.207G>A
  hgvsp: ENST00000454956.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.243G>A
  hgvsp: ENST00000447280.2:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.207G>A
  hgvsp: ENST00000409840.3:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.207G>A
  hgvsp: ENST00000409304.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.421G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33831
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala81Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

2-224866412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866412
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866412
    reference: chr 2
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.206C>T
  hgvsp: ENSP00000399655.1:p.Ala69Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.206C>T
  hgvsp: ENSP00000408452.1:p.Ala69Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.206C>T
  hgvsp: ENSP00000258405.4:p.Ala69Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.242C>T
  hgvsp: ENSP00000415786.2:p.Ala81Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.206C>T
  hgvsp: ENSP00000386969.3:p.Ala69Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.206C>T
  hgvsp: ENSP00000386412.1:p.Ala69Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.420C>T
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15297
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala81Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-224866413-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866413
    reference: chr 2
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.205G>T
  hgvsp: ENSP00000386412.1:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.419G>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.205G>T
  hgvsp: ENSP00000386969.3:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.205G>T
  hgvsp: ENSP00000408452.1:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.205G>T
  hgvsp: ENSP00000258405.4:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.205G>T
  hgvsp: ENSP00000399655.1:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.241G>T
  hgvsp: ENSP00000415786.2:p.Ala81Ser
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6832
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala81Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

2-224866413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866413
    reference: chr 2
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.241G>A
  hgvsp: ENSP00000415786.2:p.Ala81Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.205G>A
  hgvsp: ENSP00000386969.3:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.205G>A
  hgvsp: ENSP00000258405.4:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.205G>A
  hgvsp: ENSP00000408452.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.205G>A
  hgvsp: ENSP00000399655.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.205G>A
  hgvsp: ENSP00000386412.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.419G>A
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala81Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

2-224866427-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866427
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866427
    reference: chr 2
allele count: 912
allele frequency: 7.514955750753968e-3
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.191T>C
  hgvsp: ENSP00000258405.4:p.Met64Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.191T>C
  hgvsp: ENSP00000408452.1:p.Met64Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.191T>C
  hgvsp: ENSP00000399655.1:p.Met64Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.227T>C
  hgvsp: ENSP00000415786.2:p.Met76Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.191T>C
  hgvsp: ENSP00000386412.1:p.Met64Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.191T>C
  hgvsp: ENSP00000386969.3:p.Met64Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.405T>C
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 7.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 6.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 6.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 15388
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 8.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 5.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 9.75e1
  variant carriers: 206
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met76Thr
num of homozygotes: 6
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/2-224866436-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866436
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866436
    reference: chr 2
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.396T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.182T>G
  hgvsp: ENSP00000258405.4:p.Val61Gly
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.182T>G
  hgvsp: ENSP00000386412.1:p.Val61Gly
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.182T>G
  hgvsp: ENSP00000399655.1:p.Val61Gly
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.182T>G
  hgvsp: ENSP00000386969.3:p.Val61Gly
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.182T>G
  hgvsp: ENSP00000408452.1:p.Val61Gly
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.218T>G
  hgvsp: ENSP00000415786.2:p.Val73Gly
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val73Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

2-224866438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866438
    reference: chr 2
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.180G>A
  hgvsp: ENST00000409840.3:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.180G>A
  hgvsp: ENST00000409304.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.180G>A
  hgvsp: ENST00000258405.4:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.180G>A
  hgvsp: ENST00000454956.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.216G>A
  hgvsp: ENST00000447280.2:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.394G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.180G>A
  hgvsp: ENST00000432738.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser72Ser
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/2-224866440-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866440
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866440
    reference: chr 2
allele count: 6
allele frequency: 4.943642475776152e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.178T>G
  hgvsp: ENSP00000386969.3:p.Ser60Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.178T>G
  hgvsp: ENSP00000408452.1:p.Ser60Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.178T>G
  hgvsp: ENSP00000386412.1:p.Ser60Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.214T>G
  hgvsp: ENSP00000415786.2:p.Ser72Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.392T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.178T>G
  hgvsp: ENSP00000399655.1:p.Ser60Ala
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.178T>G
  hgvsp: ENSP00000258405.4:p.Ser60Ala
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15160
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34214
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser72Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

2-224866441-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866441
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866441
    reference: chr 2
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.177G>C
  hgvsp: ENST00000409840.3:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.177G>C
  hgvsp: ENST00000409304.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.177G>C
  hgvsp: ENST00000258405.4:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.391G>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.213G>C
  hgvsp: ENST00000447280.2:c.213G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.177G>C
  hgvsp: ENST00000432738.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.177G>C
  hgvsp: ENST00000454956.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34227
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala71Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-224866441-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866441
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866441
    reference: chr 2
allele count: 3
allele frequency: 2.471780505891077e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.391G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.213G>A
  hgvsp: ENST00000447280.2:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.177G>A
  hgvsp: ENST00000409840.3:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.177G>A
  hgvsp: ENST00000258405.4:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.177G>A
  hgvsp: ENST00000409304.1:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.177G>A
  hgvsp: ENST00000432738.1:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.177G>A
  hgvsp: ENST00000454956.1:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala71Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

2-224866442-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866442
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866442
    reference: chr 2
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.176C>T
  hgvsp: ENSP00000386969.3:p.Ala59Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.390C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.176C>T
  hgvsp: ENSP00000399655.1:p.Ala59Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.176C>T
  hgvsp: ENSP00000386412.1:p.Ala59Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.176C>T
  hgvsp: ENSP00000408452.1:p.Ala59Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.176C>T
  hgvsp: ENSP00000258405.4:p.Ala59Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.212C>T
  hgvsp: ENSP00000415786.2:p.Ala71Val
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala71Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-224866453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866453
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866453
    reference: chr 2
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.201C>T
  hgvsp: ENST00000447280.2:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.165C>T
  hgvsp: ENST00000409840.3:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.165C>T
  hgvsp: ENST00000432738.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.379C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.165C>T
  hgvsp: ENST00000258405.4:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.165C>T
  hgvsp: ENST00000409304.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.165C>T
  hgvsp: ENST00000454956.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro67Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

2-224866453-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866453
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866453
    reference: chr 2
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.165C>G
  hgvsp: ENST00000454956.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.165C>G
  hgvsp: ENST00000409840.3:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.165C>G
  hgvsp: ENST00000409304.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.165C>G
  hgvsp: ENST00000432738.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.379C>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.165C>G
  hgvsp: ENST00000258405.4:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.201C>G
  hgvsp: ENST00000447280.2:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6899
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34237
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro67Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-224866465-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866465
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866465
    reference: chr 2
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.153C>T
  hgvsp: ENST00000432738.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.367C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.153C>T
  hgvsp: ENST00000409304.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.153C>T
  hgvsp: ENST00000454956.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.153C>T
  hgvsp: ENST00000409840.3:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.153C>T
  hgvsp: ENST00000258405.4:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.189C>T
  hgvsp: ENST00000447280.2:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile63Ile
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

2-224866471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866471
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866471
    reference: chr 2
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.147C>T
  hgvsp: ENST00000258405.4:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.147C>T
  hgvsp: ENST00000432738.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.361C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.183C>T
  hgvsp: ENST00000447280.2:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.147C>T
  hgvsp: ENST00000409840.3:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.147C>T
  hgvsp: ENST00000409304.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.147C>T
  hgvsp: ENST00000454956.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15164
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Asp61Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

2-224866478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866478
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866478
    reference: chr 2
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.140C>T
  hgvsp: ENSP00000399655.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.354C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.140C>T
  hgvsp: ENSP00000386969.3:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.140C>T
  hgvsp: ENSP00000258405.4:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.140C>T
  hgvsp: ENSP00000408452.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.176C>T
  hgvsp: ENSP00000415786.2:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.140C>T
  hgvsp: ENSP00000386412.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15163
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro59Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

2-224866483-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866483
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866483
    reference: chr 2
allele count: 3
allele frequency: 2.471291826614165e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.135G>A
  hgvsp: ENST00000409304.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.135G>A
  hgvsp: ENST00000409840.3:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.135G>A
  hgvsp: ENST00000432738.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.135G>A
  hgvsp: ENST00000454956.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.349G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.135G>A
  hgvsp: ENST00000258405.4:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.171G>A
  hgvsp: ENST00000447280.2:c.171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser57Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

2-224866484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866484
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866484
    reference: chr 2
allele count: 5
allele frequency: 4.11868399808893e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.348C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.134C>T
  hgvsp: ENSP00000399655.1:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.170C>T
  hgvsp: ENSP00000415786.2:p.Ser57Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.134C>T
  hgvsp: ENSP00000386969.3:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.134C>T
  hgvsp: ENSP00000258405.4:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.134C>T
  hgvsp: ENSP00000386412.1:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.134C>T
  hgvsp: ENSP00000408452.1:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15162
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser57Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

2-224866489-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866489
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866489
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.165G>A
  hgvsp: ENST00000447280.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.129G>A
  hgvsp: ENST00000409840.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.129G>A
  hgvsp: ENST00000409304.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.343G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.129G>A
  hgvsp: ENST00000258405.4:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.129G>A
  hgvsp: ENST00000454956.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.129G>A
  hgvsp: ENST00000432738.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15832
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val55Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

2-224866494-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866494
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866494
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.124A>G
  hgvsp: ENSP00000408452.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.160A>G
  hgvsp: ENSP00000415786.2:p.Ile54Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.338A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.124A>G
  hgvsp: ENSP00000386412.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.124A>G
  hgvsp: ENSP00000394518.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.124A>G
  hgvsp: ENSP00000258405.4:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.124A>G
  hgvsp: ENSP00000386969.3:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.124A>G
  hgvsp: ENSP00000399655.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile54Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

2-224866498-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866498
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866498
    reference: chr 2
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.120T>C
  hgvsp: ENST00000258405.4:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.120T>C
  hgvsp: ENST00000454956.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.120T>C
  hgvsp: ENST00000423446.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.120T>C
  hgvsp: ENST00000432738.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.156T>C
  hgvsp: ENST00000447280.2:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.120T>C
  hgvsp: ENST00000409840.3:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.120T>C
  hgvsp: ENST00000409304.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.334T>C
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15161
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn52Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

2-224866499-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866499
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866499
    reference: chr 2
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.333A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.119A>G
  hgvsp: ENSP00000408452.1:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.119A>G
  hgvsp: ENSP00000386412.1:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.119A>G
  hgvsp: ENSP00000386969.3:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.119A>G
  hgvsp: ENSP00000394518.1:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.119A>G
  hgvsp: ENSP00000399655.1:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.155A>G
  hgvsp: ENSP00000415786.2:p.Asn52Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.119A>G
  hgvsp: ENSP00000258405.4:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn52Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

2-224866507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866507
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866507
    reference: chr 2
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.111G>A
  hgvsp: ENST00000258405.4:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.111G>A
  hgvsp: ENST00000432738.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.111G>A
  hgvsp: ENST00000409304.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.111G>A
  hgvsp: ENST00000409840.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.147G>A
  hgvsp: ENST00000447280.2:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.111G>A
  hgvsp: ENST00000423446.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.325G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.111G>A
  hgvsp: ENST00000454956.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln49Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

2-224866511-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866511
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866511
    reference: chr 2
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.107T>C
  hgvsp: ENSP00000408452.1:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.107T>C
  hgvsp: ENSP00000399655.1:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.107T>C
  hgvsp: ENSP00000258405.4:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.107T>C
  hgvsp: ENSP00000394518.1:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.107T>C
  hgvsp: ENSP00000386969.3:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.321T>C
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.143T>C
  hgvsp: ENSP00000415786.2:p.Ile48Thr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.107T>C
  hgvsp: ENSP00000386412.1:p.Ile36Thr
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile48Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

2-224866516-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866516
    reference: chr 2
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.102G>A
  hgvsp: ENST00000454956.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.316G>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.138G>A
  hgvsp: ENST00000447280.2:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.102G>A
  hgvsp: ENST00000432738.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.102G>A
  hgvsp: ENST00000423446.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.102G>A
  hgvsp: ENST00000409840.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.102G>A
  hgvsp: ENST00000258405.4:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.102G>A
  hgvsp: ENST00000409304.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr46Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

2-224866517-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866517
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866517
    reference: chr 2
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.101C>T
  hgvsp: ENSP00000399655.1:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.101C>T
  hgvsp: ENSP00000408452.1:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.101C>T
  hgvsp: ENSP00000258405.4:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.315C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.137C>T
  hgvsp: ENSP00000415786.2:p.Thr46Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.101C>T
  hgvsp: ENSP00000394518.1:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.101C>T
  hgvsp: ENSP00000386412.1:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.101C>T
  hgvsp: ENSP00000386969.3:p.Thr34Met
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15156
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr46Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

2-224866537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866537
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866537
    reference: chr 2
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.295C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.81C>T
  hgvsp: ENST00000409304.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.81C>T
  hgvsp: ENST00000258405.4:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.81C>T
  hgvsp: ENST00000409840.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.81C>T
  hgvsp: ENST00000423446.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.117C>T
  hgvsp: ENST00000447280.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.81C>T
  hgvsp: ENST00000432738.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.81C>T
  hgvsp: ENST00000454956.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu39Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

2-224866537-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866537
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866537
    reference: chr 2
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.81C>G
  hgvsp: ENST00000258405.4:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.117C>G
  hgvsp: ENST00000447280.2:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.81C>G
  hgvsp: ENST00000432738.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.81C>G
  hgvsp: ENST00000409304.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.81C>G
  hgvsp: ENST00000409840.3:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.295C>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.81C>G
  hgvsp: ENST00000423446.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.81C>G
  hgvsp: ENST00000454956.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu39Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

2-224866550-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866550
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866550
    reference: chr 2
allele count: 5
allele frequency: 4.119023297195769e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.68A>G
  hgvsp: ENSP00000408452.1:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.282A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.68A>G
  hgvsp: ENSP00000258405.4:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.104A>G
  hgvsp: ENSP00000415786.2:p.Asn35Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.68A>G
  hgvsp: ENSP00000386412.1:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.68A>G
  hgvsp: ENSP00000394518.1:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.68A>G
  hgvsp: ENSP00000399655.1:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.68A>G
  hgvsp: ENSP00000386969.3:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn35Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-224866553-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866553
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866553
    reference: chr 2
allele count: 4
allele frequency: 3.295327225993541e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.101T>G
  hgvsp: ENSP00000415786.2:p.Phe34Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.65T>G
  hgvsp: ENSP00000394518.1:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.65T>G
  hgvsp: ENSP00000258405.4:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.65T>G
  hgvsp: ENSP00000386412.1:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.65T>G
  hgvsp: ENSP00000386969.3:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.279T>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.65T>G
  hgvsp: ENSP00000399655.1:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.65T>G
  hgvsp: ENSP00000408452.1:p.Phe22Cys
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe34Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-224866559-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866559
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866559
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.59C>A
  hgvsp: ENSP00000394518.1:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.59C>A
  hgvsp: ENSP00000258405.4:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.95C>A
  hgvsp: ENSP00000415786.2:p.Ser32Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.59C>A
  hgvsp: ENSP00000386412.1:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.273C>A
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.59C>A
  hgvsp: ENSP00000408452.1:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.59C>A
  hgvsp: ENSP00000386969.3:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.59C>A
  hgvsp: ENSP00000399655.1:p.Ser20Tyr
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser32Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

2-224866566-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866566
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866566
    reference: chr 2
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.88A>G
  hgvsp: ENSP00000415786.2:p.Ile30Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.266A>G
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.52A>G
  hgvsp: ENSP00000258405.4:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.52A>G
  hgvsp: ENSP00000408452.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.52A>G
  hgvsp: ENSP00000394518.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.52A>G
  hgvsp: ENSP00000399655.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.52A>G
  hgvsp: ENSP00000386412.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.52A>G
  hgvsp: ENSP00000386969.3:p.Ile18Val
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile30Val
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

2-224866572-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224866572
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 224866572
    reference: chr 2
allele count: 3
allele frequency: 2.472024918011174e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386412
  ensembl transcript: ENST00000409304
  gene symbol: SERPINE2
  hgvsc: ENST00000409304.1:c.46C>T
  hgvsp: ENSP00000386412.1:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000399655
  ensembl transcript: ENST00000454956
  gene symbol: SERPINE2
  hgvsc: ENST00000454956.1:c.46C>T
  hgvsp: ENSP00000399655.1:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000386969
  ensembl transcript: ENST00000409840
  gene symbol: SERPINE2
  hgvsc: ENST00000409840.3:c.46C>T
  hgvsp: ENSP00000386969.3:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000258405
  ensembl transcript: ENST00000258405
  gene symbol: SERPINE2
  hgvsc: ENST00000258405.4:c.46C>T
  hgvsp: ENSP00000258405.4:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000415786
  ensembl transcript: ENST00000447280
  gene symbol: SERPINE2
  hgvsc: ENST00000447280.2:c.82C>T
  hgvsp: ENSP00000415786.2:p.Pro28Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135919
  ensembl transcript: ENST00000489065
  gene symbol: SERPINE2
  hgvsc: ENST00000489065.1:n.260C>T
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000408452
  ensembl transcript: ENST00000432738
  gene symbol: SERPINE2
  hgvsc: ENST00000432738.1:c.46C>T
  hgvsp: ENSP00000408452.1:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135919
  ensembl protein: ENSP00000394518
  ensembl transcript: ENST00000423446
  gene symbol: SERPINE2
  hgvsc: ENST00000423446.1:c.46C>T
  hgvsp: ENSP00000394518.1:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/8951
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro28Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8188
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.401e1

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.875e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-1

DP
type: SiteQuality
SIO_000300: 2.007617e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.811e0

GenotypeQuality
all individuals: 2042
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2808
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.872966692486445e-4
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502611514678514e-5
allele num: 66628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.902e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.708e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 4.0717e1

MQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

QD
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e0

DP
type: SiteQuality
SIO_000300: 2.014751e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.568e0

VQSLOD
type: SiteQuality
SIO_000300: -1.261e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 1.3494e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.584e1

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.004866e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.79e-1

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.068e0

DP
type: SiteQuality
SIO_000300: 2.004899e6

FS
type: SiteQuality
SIO_000300: 1.172e0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

QD
type: SiteQuality
SIO_000300: 5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.5e-2

DP
type: SiteQuality
SIO_000300: 2.004472e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

FS
type: SiteQuality
SIO_000300: 8.938000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.135e0

QD
type: SiteQuality
SIO_000300: 1.175e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeQuality
all individuals: 2051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11079
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8198
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2821
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.172e1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 2.004377e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.19e-1

GenotypeQuality
all individuals: 11079
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 2.004242e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 1.424e0

QD
type: SiteQuality
SIO_000300: 7.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 1348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11083
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.774706288873532e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.32e-1

DP
type: SiteQuality
SIO_000300: 2.003122e6

MQRankSum
type: SiteQuality
SIO_000300: 9.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.53e-1

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 1.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

QD
type: SiteQuality
SIO_000300: 1.58e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.996315e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

GenotypeQuality
all individuals: 2046
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11072
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.496e0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.46e1

DP
type: SiteQuality
SIO_000300: 1.992857e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e-1

GenotypeQuality
all individuals: 468
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11068
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2680
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.956e1

DP
type: SiteQuality
SIO_000300: 1.952579e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.538e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
all individuals: 5547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.943889681407513e-4
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65956
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.844e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.49e-2

QD
type: SiteQuality
SIO_000300: 1.828e1

DP
type: SiteQuality
SIO_000300: 1.982902e6

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1016
bin: 3.25e1
variant carriers: 29

GenotypeQuality
all individuals: 20898
bin: 6.25e1
variant carriers: 82

GenotypeQuality
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bin: 9.75e1
variant carriers: 20507

GenotypeQuality
all individuals: 5547
bin: 6.75e1
variant carriers: 101

GenotypeQuality
all individuals: 676
bin: 9.25e1
variant carriers: 188

Latino
type: Population
allele count: 1540
allele frequency: 1.341229750914475e-1
allele num: 11482
num of homozygotes: 109

European (Finnish)
type: Population
allele count: 763
allele frequency: 1.159574468085106e-1
allele num: 6580
num of homozygotes: 46

Other
type: Population
allele count: 192
allele frequency: 2.133333333333333e-1
allele num: 900
num of homozygotes: 20

African
type: Population
allele count: 4548
allele frequency: 4.580983078162772e-1
allele num: 9928
num of homozygotes: 1041

East Asian
type: Population
allele count: 1097
allele frequency: 1.304089396100808e-1
allele num: 8412
num of homozygotes: 68

European (Non-Finnish)
type: Population
allele count: 13533
allele frequency: 2.051822427072594e-1
allele num: 65956
num of homozygotes: 1424

South Asian
type: Population
allele count: 2818
allele frequency: 1.720180686118911e-1
allele num: 16382
num of homozygotes: 278

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.41e0

QD
type: SiteQuality
SIO_000300: 1.828e1

DP
type: SiteQuality
SIO_000300: 1.982902e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.844e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.49e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 536
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27256
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.619629758994062e-4
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 98
allele frequency: 6.005637945826694e-3
allele num: 16318
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65640
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.74e0

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.41e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

DP
type: SiteQuality
SIO_000300: 1.668659e6

GenotypeQuality
all individuals: 915
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
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variant carriers: 0

GenotypeQuality
all individuals: 1808
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variant carriers: 0

GenotypeQuality
all individuals: 25262
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variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.047502047502048e-4
allele num: 9768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

QD
type: SiteQuality
SIO_000300: 8.27e0

FS
type: SiteQuality
SIO_000300: 2.7687e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.15e0

DP
type: SiteQuality
SIO_000300: 1.640328e6

GenotypeQuality
all individuals: 7320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 2722
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variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1790
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.056766762649116e-4
allele num: 9724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.378e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.368e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 2.5761e1

QD
type: SiteQuality
SIO_000300: 6.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.601181e6

GenotypeQuality
all individuals: 4887
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 4.75e1
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GenotypeQuality
all individuals: 2677
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64930
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.140786749482402e-4
allele num: 9660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8168
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.068e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.472e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.567488e6

GenotypeQuality
all individuals: 2322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
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variant carriers: 0

GenotypeQuality
all individuals: 1534
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variant carriers: 0

GenotypeQuality
all individuals: 713
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variant carriers: 0

GenotypeQuality
all individuals: 29971
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variant carriers: 0

GenotypeQuality
all individuals: 7533
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variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64156
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024380249948781e-4
allele num: 9762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.435e0

QD
type: SiteQuality
SIO_000300: 1.229e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.787e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

DP
type: SiteQuality
SIO_000300: 1.551503e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.086e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 975
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variant carriers: 0

GenotypeQuality
all individuals: 7685
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2382
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variant carriers: 0

GenotypeQuality
all individuals: 731
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variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.04e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: -1.593e0

QD
type: SiteQuality
SIO_000300: 1.333e1

FS
type: SiteQuality
SIO_000300: 1.0893e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.891e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.57701e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 141
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GenotypeQuality
all individuals: 2393
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GenotypeQuality
all individuals: 599
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GenotypeQuality
all individuals: 1995
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variant carriers: 0

GenotypeQuality
all individuals: 1187
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variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13456
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

DP
type: SiteQuality
SIO_000300: 1.584519e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.312e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

GenotypeQuality
all individuals: 1107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
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GenotypeQuality
all individuals: 747
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variant carriers: 0

GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 7809
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GenotypeQuality
all individuals: 984
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GenotypeQuality
all individuals: 2402
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.33998825601879e-5
allele num: 13624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.324788444251573e-4
allele num: 64522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

DP
type: SiteQuality
SIO_000300: 1.596972e6

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.262e1

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7890
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33927
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 7.274843590862796e-4
allele num: 13746
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.793e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

FS
type: SiteQuality
SIO_000300: 1.4567e1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 1.604931e6

GenotypeQuality
all individuals: 7949
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.191140514885661e-5
allele num: 13906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

VQSLOD
type: SiteQuality
SIO_000300: -9.943e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.563e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

DP
type: SiteQuality
SIO_000300: 1.610491e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 598
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.0e-4
allele num: 10000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64910
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.936e0

FS
type: SiteQuality
SIO_000300: 2.0683e1

MQ
type: SiteQuality
SIO_000300: 5.838e1

QD
type: SiteQuality
SIO_000300: 1.454e1

DP
type: SiteQuality
SIO_000300: 1.622124e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
all individuals: 2490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35930
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.891798759476223e-5
allele num: 14510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.759e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.325e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 1.633233e6

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3678
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36766
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530409231428484e-5
allele num: 65342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14928
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.647396e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 129
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 2537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8308
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 22
allele frequency: 2.555168408826945e-3
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.614631565021828e-5
allele num: 15118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.636852394916911e-5
allele num: 65472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

DP
type: SiteQuality
SIO_000300: 1.652838e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8658
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.116956202593589e-5
allele num: 16348
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.738e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 5.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.693063e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

VQSLOD
type: SiteQuality
SIO_000300: -5.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

GenotypeQuality
all individuals: 38707
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 844
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506977304921788e-5
allele num: 66358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

DP
type: SiteQuality
SIO_000300: 1.695644e6

FS
type: SiteQuality
SIO_000300: 5.573e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

VQSLOD
type: SiteQuality
SIO_000300: -3.729e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
all individuals: 8671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 3741
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variant carriers: 3

GenotypeQuality
all individuals: 1077
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 38780
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variant carriers: 0

GenotypeQuality
all individuals: 849
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596952908587258e-4
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.697722e6

QD
type: SiteQuality
SIO_000300: 1.254e1

FS
type: SiteQuality
SIO_000300: 6.284e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

GenotypeQuality
all individuals: 1081
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38922
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variant carriers: 0

GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
all individuals: 1887
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GenotypeQuality
all individuals: 853
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.27e-1

DP
type: SiteQuality
SIO_000300: 1.698921e6

FS
type: SiteQuality
SIO_000300: 1.239e1

MQRankSum
type: SiteQuality
SIO_000300: 9.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.505e0

QD
type: SiteQuality
SIO_000300: 1.632e1

MQ
type: SiteQuality
SIO_000300: 6.015e1

GenotypeQuality
all individuals: 1087
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8719
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.665571235260003e-5
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.702335e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 1089
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931247585940518e-4
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.73e-1

FS
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 1.704166e6

QD
type: SiteQuality
SIO_000300: 1.15e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: -6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

GenotypeQuality
all individuals: 122
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 226
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variant carriers: 28

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 18

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16139

GenotypeQuality
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GenotypeQuality
all individuals: 6587
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variant carriers: 10

African
type: Population
allele count: 2304
allele frequency: 2.221793635486982e-1
allele num: 10370
num of homozygotes: 227

European (Finnish)
type: Population
allele count: 800
allele frequency: 1.210287443267776e-1
allele num: 6610
num of homozygotes: 50

East Asian
type: Population
allele count: 1929
allele frequency: 2.233155823107201e-1
allele num: 8638
num of homozygotes: 233

South Asian
type: Population
allele count: 3474
allele frequency: 2.104944255937954e-1
allele num: 16504
num of homozygotes: 388

Other
type: Population
allele count: 127
allele frequency: 1.401766004415011e-1
allele num: 906
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 6762
allele frequency: 1.015376298876809e-1
allele num: 66596
num of homozygotes: 355

Latino
type: Population
allele count: 2374
allele frequency: 2.053988579338986e-1
allele num: 11558
num of homozygotes: 244

VQSLOD
type: SiteQuality
SIO_000300: 6.65e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.519e1

MQRankSum
type: SiteQuality
SIO_000300: 8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 2.292229e6

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 15294
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.281e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

DP
type: SiteQuality
SIO_000300: 2.257889e6

QD
type: SiteQuality
SIO_000300: 1.171e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

GenotypeQuality
all individuals: 519
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 797
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 49
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 2.258868e6

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
all individuals: 6820
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variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.498950146979423e-5
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

DP
type: SiteQuality
SIO_000300: 2.258868e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.275e1

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.783e0

QD
type: SiteQuality
SIO_000300: 1.282e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

DP
type: SiteQuality
SIO_000300: 2.259152e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.039e0

VQSLOD
type: SiteQuality
SIO_000300: 4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.199e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.37e-1

DP
type: SiteQuality
SIO_000300: 2.259268e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.259439e6

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1400
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.016e0

DP
type: SiteQuality
SIO_000300: 2.259694e6

FS
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.563e0

BaseQRankSum
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SIO_000300: -2.561e0

MQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

FS
type: SiteQuality
SIO_000300: 1.3062e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

DP
type: SiteQuality
SIO_000300: 2.259778e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

DP
type: SiteQuality
SIO_000300: 2.259778e6

MQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.563e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.561e0

FS
type: SiteQuality
SIO_000300: 1.3062e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 904

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 13
allele frequency: 7.874015748031496e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 66
allele frequency: 9.978832778953735e-3
allele num: 6614
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 746
allele frequency: 1.118306649877076e-2
allele num: 66708
num of homozygotes: 4

African
type: Population
allele count: 12
allele frequency: 1.15473441108545e-3
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 65
allele frequency: 5.616035942630033e-3
allele num: 11574
num of homozygotes: 1

Other
type: Population
allele count: 10
allele frequency: 1.101321585903084e-2
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.311e1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 1.867e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.301407e6

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

MQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

FS
type: SiteQuality
SIO_000300: 2.682e0

DP
type: SiteQuality
SIO_000300: 2.264771e6

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997961386257345e-5
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 2.265055e6

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

QD
type: SiteQuality
SIO_000300: 1.446e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.651e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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variant carriers: 0

South Asian
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allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.265373e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.43e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.238e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.05e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.277e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496537665997182e-5
allele num: 66718
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.153e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
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VQSLOD
type: SiteQuality
SIO_000300: 9.25e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.935e1

FS
type: SiteQuality
SIO_000300: 1.991e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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SIO_000300: 1.01e0

DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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VQSLOD
type: SiteQuality
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MQ
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66720
num of homozygotes: 0

Latino
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Other
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East Asian
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ReadPosRankSum
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FS
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele num: 8654
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Other
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South Asian
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allele frequency: 1.211240310077519e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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QD
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MQRankSum
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SIO_000300: 3.98e-1

ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

FS
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 2.266329e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.959e0

ClippingRankSum
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SIO_000300: -1.044e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10400
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
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Other
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East Asian
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Latino
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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Latino
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allele num: 11576
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Other
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East Asian
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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allele num: 16512
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66730
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Latino
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European (Finnish)
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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Other
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66732
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East Asian
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South Asian
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African
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Latino
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Other
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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DP
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 5.119e0

InbreedingCoeff
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MQRankSum
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MQ
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DP
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ClippingRankSum
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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ClippingRankSum
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MQ
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BaseQRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 0.0e0
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Other
type: Population
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MQ
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SIO_000300: 5.989e1

ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
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Other
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BaseQRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
type: Population
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allele num: 908
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele num: 6614
num of homozygotes: 0

South Asian
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MQ
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

East Asian
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

East Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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Other
type: Population
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MQ
type: SiteQuality
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 1.15606936416185e-4
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 5.994844433786943e-5
allele num: 66724
num of homozygotes: 0

South Asian
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.143e0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15157
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995203836930456e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

QD
type: SiteQuality
SIO_000300: 1.445e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.19e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 2.26756e6

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

QD
type: SiteQuality
SIO_000300: 1.127e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.104e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.902e1

DP
type: SiteQuality
SIO_000300: 2.267221e6

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15155
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

DP
type: SiteQuality
SIO_000300: 2.267092e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.049e0

QD
type: SiteQuality
SIO_000300: 1.287e1

FS
type: SiteQuality
SIO_000300: 7.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 6900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15158
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.469010175763182e-4
allele num: 8648
num of homozygotes: 0