1-21798152-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798152
    reference: chr 1
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.537G>C
  hgvsp: ENSP00000316782.5:p.Leu179Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.369G>C
  hgvsp: ENSP00000316739.6:p.Leu123Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.369G>C
  hgvsp: ENSP00000391865.1:p.Leu123Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.327G>C
  hgvsp: ENSP00000415711.2:p.Leu109Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.537G>C
  hgvsp: ENSP00000340336.5:p.Leu179Phe
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5970
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu179Phe
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-21798154-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798154
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798154
    reference: chr 1
allele count: 783
allele frequency: 6.581933726736269e-3
allele num: 118962
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.539A>G
  hgvsp: ENSP00000316782.5:p.Asn180Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.371A>G
  hgvsp: ENSP00000391865.1:p.Asn124Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.539A>G
  hgvsp: ENSP00000340336.5:p.Asn180Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.371A>G
  hgvsp: ENSP00000316739.6:p.Asn124Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.329A>G
  hgvsp: ENSP00000415711.2:p.Asn110Ser
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 9.75e1
  variant carriers: 855
genotype depth: GenotypeDepth
  all individuals: 680
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 443
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  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5487
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 26
genotype quality: GenotypeQuality
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  variant carriers: 15
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 14405
  bin: 6.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 5987
  bin: 6.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 21615
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  variant carriers: 479
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1948
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genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 26
hgvs: p.Asn180Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-21798157-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798157
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798157
    reference: chr 1
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.374A>G
  hgvsp: ENSP00000316739.6:p.Gln125Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.542A>G
  hgvsp: ENSP00000340336.5:p.Gln181Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.542A>G
  hgvsp: ENSP00000316782.5:p.Gln181Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.332A>G
  hgvsp: ENSP00000415711.2:p.Gln111Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.374A>G
  hgvsp: ENSP00000391865.1:p.Gln125Arg
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 179
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 88
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genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 9
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genotype quality: GenotypeQuality
  all individuals: 15094
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln181Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

1-21798171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798171
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798171
    reference: chr 1
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.388C>T
  hgvsp: ENSP00000391865.1:p.Leu130Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.556C>T
  hgvsp: ENSP00000316782.5:p.Leu186Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.346C>T
  hgvsp: ENSP00000415711.2:p.Leu116Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.388C>T
  hgvsp: ENSP00000316739.6:p.Leu130Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.556C>T
  hgvsp: ENSP00000340336.5:p.Leu186Phe
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1981
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6302
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu186Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-21798181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798181
    reference: chr 1
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.356C>G
  hgvsp: ENSP00000415711.2:p.Pro119Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.566C>G
  hgvsp: ENSP00000316782.5:p.Pro189Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.566C>G
  hgvsp: ENSP00000340336.5:p.Pro189Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.398C>G
  hgvsp: ENSP00000316739.6:p.Pro133Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.398C>G
  hgvsp: ENSP00000391865.1:p.Pro133Arg
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro189Arg
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-21798181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798181
    reference: chr 1
allele count: 5
allele frequency: 4.128750970256478e-5
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.398C>T
  hgvsp: ENSP00000391865.1:p.Pro133Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.356C>T
  hgvsp: ENSP00000415711.2:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.566C>T
  hgvsp: ENSP00000316782.5:p.Pro189Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.398C>T
  hgvsp: ENSP00000316739.6:p.Pro133Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.566C>T
  hgvsp: ENSP00000340336.5:p.Pro189Leu
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15075
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21902
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro189Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-21798182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798182
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798182
    reference: chr 1
allele count: 5
allele frequency: 4.127864738128261e-5
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.399G>A
  hgvsp: ENST00000318220.6:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.357G>A
  hgvsp: ENST00000454000.2:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.567G>A
  hgvsp: ENST00000342104.5:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.399G>A
  hgvsp: ENST00000434838.2:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.567G>A
  hgvsp: ENST00000318249.5:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21897
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2927
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro189Pro
num of homozygotes: 1
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-21798183-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798183
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798183
    reference: chr 1
allele count: 113
allele frequency: 9.328204196866384e-4
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.568G>C
  hgvsp: ENSP00000316782.5:p.Asp190His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.568G>C
  hgvsp: ENSP00000340336.5:p.Asp190His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.358G>C
  hgvsp: ENSP00000415711.2:p.Asp120His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.400G>C
  hgvsp: ENSP00000316739.6:p.Asp134His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.400G>C
  hgvsp: ENSP00000391865.1:p.Asp134His
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12408
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 9.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4508
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21928
  bin: 9.75e1
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp190His
num of homozygotes: 1
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-21798184-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798184
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798184
    reference: chr 1
allele count: 3
allele frequency: 2.476269087907552e-5
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.401A>G
  hgvsp: ENSP00000316739.6:p.Asp134Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.359A>G
  hgvsp: ENSP00000415711.2:p.Asp120Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.569A>G
  hgvsp: ENSP00000340336.5:p.Asp190Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.401A>G
  hgvsp: ENSP00000391865.1:p.Asp134Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.569A>G
  hgvsp: ENSP00000316782.5:p.Asp190Gly
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21876
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15272
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp190Gly
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

1-21798190-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798190
    reference: chr 1
allele count: 46
allele frequency: 3.79656988164606e-4
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.365C>T
  hgvsp: ENSP00000415711.2:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.575C>T
  hgvsp: ENSP00000316782.5:p.Pro192Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.407C>T
  hgvsp: ENSP00000391865.1:p.Pro136Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.407C>T
  hgvsp: ENSP00000316739.6:p.Pro136Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.575C>T
  hgvsp: ENSP00000340336.5:p.Pro192Leu
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21881
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro192Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

1-21798191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798191
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798191
    reference: chr 1
allele count: 947
allele frequency: 7.814820927545799e-3
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.408G>A
  hgvsp: ENST00000434838.2:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.366G>A
  hgvsp: ENST00000454000.2:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.576G>A
  hgvsp: ENST00000318249.5:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.576G>A
  hgvsp: ENST00000342104.5:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.408G>A
  hgvsp: ENST00000318220.6:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12887
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 9.75e1
  variant carriers: 651
genotype quality: GenotypeQuality
  all individuals: 4507
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21997
  bin: 9.75e1
  variant carriers: 895
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15230
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro192Pro
num of homozygotes: 42
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-21798196-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798196
    reference: chr 1
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.581A>G
  hgvsp: ENSP00000316782.5:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.581A>G
  hgvsp: ENSP00000340336.5:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.371A>G
  hgvsp: ENSP00000415711.2:p.Asn124Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.413A>G
  hgvsp: ENSP00000391865.1:p.Asn138Ser
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.413A>G
  hgvsp: ENSP00000316739.6:p.Asn138Ser
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2929
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21902
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn194Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

1-21798208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798208
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798208
    reference: chr 1
allele count: 1313
allele frequency: 1.083118854352273e-2
allele num: 121224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.425G>A
  hgvsp: ENSP00000391865.1:p.Arg142Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.425G>A
  hgvsp: ENSP00000316739.6:p.Arg142Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.593G>A
  hgvsp: ENSP00000316782.5:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.383G>A
  hgvsp: ENSP00000415711.2:p.Arg128Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.593G>A
  hgvsp: ENSP00000340336.5:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 12893
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 9.75e1
  variant carriers: 897
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15304
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22121
  bin: 9.75e1
  variant carriers: 1261
hgvs: p.Arg198Gln
num of homozygotes: 47
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-21798208-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798208
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798208
    reference: chr 1
allele count: 2
allele frequency: 1.649838315845047e-5
allele num: 121224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.593G>C
  hgvsp: ENSP00000340336.5:p.Arg198Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.383G>C
  hgvsp: ENSP00000415711.2:p.Arg128Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.425G>C
  hgvsp: ENSP00000391865.1:p.Arg142Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.425G>C
  hgvsp: ENSP00000316739.6:p.Arg142Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.593G>C
  hgvsp: ENSP00000316782.5:p.Arg198Pro
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22121
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg198Pro
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-21798214-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798214
    reference: chr 1
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.431T>G
  hgvsp: ENSP00000316739.6:p.Leu144Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.599T>G
  hgvsp: ENSP00000316782.5:p.Leu200Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.431T>G
  hgvsp: ENSP00000391865.1:p.Leu144Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.599T>G
  hgvsp: ENSP00000340336.5:p.Leu200Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.389T>G
  hgvsp: ENSP00000415711.2:p.Leu130Arg
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21816
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu200Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

1-21798216-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798216
    reference: chr 1
allele count: 41
allele frequency: 3.382670824876656e-4
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.433C>T
  hgvsp: ENSP00000316739.6:p.Arg145Ter
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.601C>T
  hgvsp: ENSP00000340336.5:p.Arg201Ter
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.433C>T
  hgvsp: ENSP00000391865.1:p.Arg145Ter
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.391C>T
  hgvsp: ENSP00000415711.2:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.601C>T
  hgvsp: ENSP00000316782.5:p.Arg201Ter
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8014
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21819
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg201Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

1-21798217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798217
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798217
    reference: chr 1
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.434G>A
  hgvsp: ENSP00000391865.1:p.Arg145Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.434G>A
  hgvsp: ENSP00000316739.6:p.Arg145Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.602G>A
  hgvsp: ENSP00000316782.5:p.Arg201Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.392G>A
  hgvsp: ENSP00000415711.2:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.602G>A
  hgvsp: ENSP00000340336.5:p.Arg201Gln
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15412
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg201Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-21798219-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798219
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798218
    reference: chr 1
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.396delA
  hgvsp: ENSP00000415711.2:p.Glu132AspfsTer172
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.438delA
  hgvsp: ENSP00000391865.1:p.Glu146AspfsTer172
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.606delA
  hgvsp: ENSP00000316782.5:p.Glu202AspfsTer172
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.606delA
  hgvsp: ENSP00000340336.5:p.Glu202AspfsTer138
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.438delA
  hgvsp: ENSP00000316739.6:p.Glu146AspfsTer172
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu202AspfsTer172
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GA
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-21798220-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798220
    reference: chr 1
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.395A>T
  hgvsp: ENSP00000415711.2:p.Glu132Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.437A>T
  hgvsp: ENSP00000391865.1:p.Glu146Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.605A>T
  hgvsp: ENSP00000316782.5:p.Glu202Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.605A>T
  hgvsp: ENSP00000340336.5:p.Glu202Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.437A>T
  hgvsp: ENSP00000316739.6:p.Glu146Val
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu202Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

1-21798228-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798228
    reference: chr 1
allele count: 3
allele frequency: 2.475124993812188e-5
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.403G>A
  hgvsp: ENSP00000415711.2:p.Ala135Thr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.613G>A
  hgvsp: ENSP00000316782.5:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.445G>A
  hgvsp: ENSP00000391865.1:p.Ala149Thr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.613G>A
  hgvsp: ENSP00000340336.5:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.445G>A
  hgvsp: ENSP00000316739.6:p.Ala149Thr
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala205Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-21798243-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798243
    reference: chr 1
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.460C>G
  hgvsp: ENSP00000391865.1:p.Leu154Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.460C>G
  hgvsp: ENSP00000316739.6:p.Leu154Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.628C>G
  hgvsp: ENSP00000316782.5:p.Leu210Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.628C>G
  hgvsp: ENSP00000340336.5:p.Leu210Val
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.418C>G
  hgvsp: ENSP00000415711.2:p.Leu140Val
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4065
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu210Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-21798243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798243
    reference: chr 1
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.628C>T
  hgvsp: ENST00000318249.5:c.628C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.460C>T
  hgvsp: ENST00000318220.6:c.460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.418C>T
  hgvsp: ENST00000454000.2:c.418C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.460C>T
  hgvsp: ENST00000434838.2:c.460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.628C>T
  hgvsp: ENST00000342104.5:c.628C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu210Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-21798244-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798244
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798244
    reference: chr 1
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.629T>C
  hgvsp: ENSP00000340336.5:p.Leu210Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.461T>C
  hgvsp: ENSP00000316739.6:p.Leu154Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.629T>C
  hgvsp: ENSP00000316782.5:p.Leu210Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.419T>C
  hgvsp: ENSP00000415711.2:p.Leu140Pro
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.461T>C
  hgvsp: ENSP00000391865.1:p.Leu154Pro
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21800
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu210Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-21798245-G-GGCACAGCACCTCGTCCAAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798265
    reference: chr 1
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: GGCACAGCACCTCGTCCAAAA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsp: ENSP00000316739.6:p.Leu162HisfsTer163
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsp: ENSP00000391865.1:p.Leu162HisfsTer163
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsp: ENSP00000340336.5:p.Leu218HisfsTer129
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsp: ENSP00000316782.5:p.Leu218HisfsTer163
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsp: ENSP00000415711.2:p.Leu148HisfsTer163
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21800
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4066
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu218HisfsTer163
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-21798249-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798249
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798249
    reference: chr 1
allele count: 5221
allele frequency: 4.311953882492856e-2
allele num: 121082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.466C>G
  hgvsp: ENSP00000391865.1:p.Gln156Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.466C>G
  hgvsp: ENSP00000316739.6:p.Gln156Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.424C>G
  hgvsp: ENSP00000415711.2:p.Gln142Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.634C>G
  hgvsp: ENSP00000316782.5:p.Gln212Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.634C>G
  hgvsp: ENSP00000340336.5:p.Gln212Glu
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 9.75e1
  variant carriers: 2923
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 5.25e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.75e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 12434
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 12810
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 3.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 4.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 8.75e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 241
genotype quality: GenotypeQuality
  all individuals: 4487
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22113
  bin: 9.75e1
  variant carriers: 5037
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln212Glu
num of homozygotes: 169
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

1-21798250-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798250
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798250
    reference: chr 1
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.467A>G
  hgvsp: ENSP00000316739.6:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.425A>G
  hgvsp: ENSP00000415711.2:p.Gln142Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.467A>G
  hgvsp: ENSP00000391865.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.635A>G
  hgvsp: ENSP00000340336.5:p.Gln212Arg
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.635A>G
  hgvsp: ENSP00000316782.5:p.Gln212Arg
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4897
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18711
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln212Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

1-21798252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798252
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798252
    reference: chr 1
allele count: 30
allele frequency: 2.479215906649257e-4
allele num: 121006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.469C>T
  hgvsp: ENSP00000316739.6:p.His157Tyr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.427C>T
  hgvsp: ENSP00000415711.2:p.His143Tyr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.637C>T
  hgvsp: ENSP00000316782.5:p.His213Tyr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.637C>T
  hgvsp: ENSP00000340336.5:p.His213Tyr
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.469C>T
  hgvsp: ENSP00000391865.1:p.His157Tyr
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16321
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His213Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-21798257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798257
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798257
    reference: chr 1
allele count: 41
allele frequency: 3.389774455982538e-4
allele num: 120952
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.642C>T
  hgvsp: ENST00000318249.5:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.474C>T
  hgvsp: ENST00000434838.2:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.642C>T
  hgvsp: ENST00000342104.5:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.474C>T
  hgvsp: ENST00000318220.6:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.432C>T
  hgvsp: ENST00000454000.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4892
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu214Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-21798258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798258
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798258
    reference: chr 1
allele count: 8
allele frequency: 6.613756613756614e-5
allele num: 120960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.475G>A
  hgvsp: ENSP00000391865.1:p.Val159Ile
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.643G>A
  hgvsp: ENSP00000340336.5:p.Val215Ile
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.433G>A
  hgvsp: ENSP00000415711.2:p.Val145Ile
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.643G>A
  hgvsp: ENSP00000316782.5:p.Val215Ile
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.475G>A
  hgvsp: ENSP00000316739.6:p.Val159Ile
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18673
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val215Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-21798258-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798258
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798258
    reference: chr 1
allele count: 4
allele frequency: 3.306878306878307e-5
allele num: 120960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.433G>T
  hgvsp: ENSP00000415711.2:p.Val145Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.643G>T
  hgvsp: ENSP00000340336.5:p.Val215Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.643G>T
  hgvsp: ENSP00000316782.5:p.Val215Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.475G>T
  hgvsp: ENSP00000316739.6:p.Val159Phe
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.475G>T
  hgvsp: ENSP00000391865.1:p.Val159Phe
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18673
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val215Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-21798270-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798270
    reference: chr 1
allele count: 1
allele frequency: 8.278968109414843e-6
allele num: 120788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.487A>T
  hgvsp: ENSP00000391865.1:p.Ser163Cys
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.655A>T
  hgvsp: ENSP00000316782.5:p.Ser219Cys
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.655A>T
  hgvsp: ENSP00000340336.5:p.Ser219Cys
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.445A>T
  hgvsp: ENSP00000415711.2:p.Ser149Cys
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.487A>T
  hgvsp: ENSP00000316739.6:p.Ser163Cys
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4894
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser219Cys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-21798276-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798276
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798276
    reference: chr 1
allele count: 21
allele frequency: 1.739562624254473e-4
allele num: 120720
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661G>C
  hgvsp: ENSP00000316782.5:p.Glu221Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661G>C
  hgvsp: ENSP00000340336.5:p.Glu221Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493G>C
  hgvsp: ENSP00000316739.6:p.Glu165Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493G>C
  hgvsp: ENSP00000391865.1:p.Glu165Gln
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451G>C
  hgvsp: ENSP00000415711.2:p.Glu151Gln
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13383
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu221Gln
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

1-21798279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798279
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798279
    reference: chr 1
allele count: 3
allele frequency: 2.488346245085516e-5
allele num: 120562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+3G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+3G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+3G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+3G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+3G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4869
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
hgvs: c.661+3G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-21798285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798285
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798285
    reference: chr 1
allele count: 2
allele frequency: 1.659337924168257e-5
allele num: 120530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+9G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+9G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+9G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+9G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+9G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18561
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6666
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

1-21798289-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798289
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798289
    reference: chr 1
allele count: 2
allele frequency: 1.661074382910867e-5
allele num: 120404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+13T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+13T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+13T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+13T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+13T>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18562
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-21798290-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798290
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798290
    reference: chr 1
allele count: 3
allele frequency: 2.491446035278876e-5
allele num: 120412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+14A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+14A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+14A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+14A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+14A>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15549
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18560
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

1-21798292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798292
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798292
    reference: chr 1
allele count: 2
allele frequency: 1.661405549094534e-5
allele num: 120380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+16G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+16G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+16G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+16G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+16G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15451
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-21798297-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798297
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798297
    reference: chr 1
allele count: 3
allele frequency: 2.495259007885018e-5
allele num: 120228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+21G>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+21G>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+21G>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+21G>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+21G>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-21798311-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798311
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798311
    reference: chr 1
allele count: 1
allele frequency: 8.339588024351597e-6
allele num: 119910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+35C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+35C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+35C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+35C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+35C>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18508
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-21798316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798316
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798316
    reference: chr 1
allele count: 36
allele frequency: 3.006664773581439e-4
allele num: 119734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+40C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+40C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+40C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+40C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+40C>T
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6072
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8212
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11250
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-21798317-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21798317
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21798317
    reference: chr 1
allele count: 1
allele frequency: 8.35282325425994e-6
allele num: 119720
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.661+41T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.661+41T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.493+41T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.493+41T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.451+41T>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
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genotype quality: GenotypeQuality
  all individuals: 140
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genotype quality: GenotypeQuality
  all individuals: 2056
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4260
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18497
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

1-21799288-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799288
    reference: chr 1
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.494-48C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.452-48C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.494-48C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.662-48C>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.662-48C>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
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genotype quality: GenotypeQuality
  all individuals: 3777
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

1-21799293-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799293
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799293
    reference: chr 1
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.452-43T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.662-43T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.662-43T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.494-43T>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.494-43T>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9845
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4002
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum

1-21799312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799312
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799312
    reference: chr 1
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.494-24G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.494-24G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.662-24G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.662-24G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.452-24G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26710
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-21799320-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799320
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799320
    reference: chr 1
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.494-16A>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.452-16A>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.662-16A>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.662-16A>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.494-16A>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5347
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-21799335-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799335
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799334
    reference: chr 1
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.497delA
  hgvsp: ENSP00000316739.6:p.Asn166MetfsTer152
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.665delA
  hgvsp: ENSP00000340336.5:p.Asn222MetfsTer118
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.497delA
  hgvsp: ENSP00000391865.1:p.Asn166MetfsTer152
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.665delA
  hgvsp: ENSP00000316782.5:p.Asn222MetfsTer152
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.455delA
  hgvsp: ENSP00000415711.2:p.Asn152MetfsTer152
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10457
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2780
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn222MetfsTer152
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: GA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

1-21799346-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
allele count: 161
allele frequency: 1.326522204828211e-3
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.672C>G
  hgvsp: ENSP00000316782.5:p.Asp224Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.462C>G
  hgvsp: ENSP00000415711.2:p.Asp154Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.504C>G
  hgvsp: ENSP00000391865.1:p.Asp168Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.504C>G
  hgvsp: ENSP00000316739.6:p.Asp168Glu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.672C>G
  hgvsp: ENSP00000340336.5:p.Asp224Glu
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp224Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

1-21799346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
allele count: 3
allele frequency: 2.471780505891077e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.504C>T
  hgvsp: ENST00000318220.6:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.462C>T
  hgvsp: ENST00000454000.2:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.672C>T
  hgvsp: ENST00000318249.5:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.672C>T
  hgvsp: ENST00000342104.5:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.504C>T
  hgvsp: ENST00000434838.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26802
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp224Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-21799346-CGAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799343
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.465_467delTGA
  hgvsp: ENSP00000415711.2:p.Asp155del
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.507_509delTGA
  hgvsp: ENSP00000391865.1:p.Asp169del
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.507_509delTGA
  hgvsp: ENSP00000316739.6:p.Asp169del
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.675_677delTGA
  hgvsp: ENSP00000340336.5:p.Asp225del
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.675_677delTGA
  hgvsp: ENSP00000316782.5:p.Asp225del
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp225del
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: CGAT
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-21799346-CGATGAGGAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799337
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26802
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11578
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10404
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66708
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
reference allele: CGATGAGGAT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

1-21799347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799347
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.673G>A
  hgvsp: ENSP00000316782.5:p.Asp225Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.505G>A
  hgvsp: ENSP00000316739.6:p.Asp169Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.673G>A
  hgvsp: ENSP00000340336.5:p.Asp225Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.505G>A
  hgvsp: ENSP00000391865.1:p.Asp169Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.463G>A
  hgvsp: ENSP00000415711.2:p.Asp155Asn
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5339
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp225Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

1-21799349-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799349
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799349
    reference: chr 1
allele count: 5
allele frequency: 4.119498409873614e-5
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.507T>C
  hgvsp: ENST00000434838.2:c.507T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.675T>C
  hgvsp: ENST00000318249.5:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.675T>C
  hgvsp: ENST00000342104.5:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.465T>C
  hgvsp: ENST00000454000.2:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.507T>C
  hgvsp: ENST00000318220.6:c.507T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4049
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp225Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

1-21799354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799354
    reference: chr 1
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.512A>G
  hgvsp: ENSP00000316739.6:p.Asp171Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.680A>G
  hgvsp: ENSP00000316782.5:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.512A>G
  hgvsp: ENSP00000391865.1:p.Asp171Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.680A>G
  hgvsp: ENSP00000340336.5:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.470A>G
  hgvsp: ENSP00000415711.2:p.Asp157Gly
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26799
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp227Gly
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-21799359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799359
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799359
    reference: chr 1
allele count: 8
allele frequency: 6.59108884787767e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.517G>A
  hgvsp: ENSP00000316739.6:p.Asp173Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.685G>A
  hgvsp: ENSP00000340336.5:p.Asp229Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.685G>A
  hgvsp: ENSP00000316782.5:p.Asp229Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.517G>A
  hgvsp: ENSP00000391865.1:p.Asp173Asn
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.475G>A
  hgvsp: ENSP00000415711.2:p.Asp159Asn
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4049
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp229Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-21799372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799372
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799372
    reference: chr 1
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.530A>G
  hgvsp: ENSP00000391865.1:p.Glu177Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.698A>G
  hgvsp: ENSP00000316782.5:p.Glu233Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.698A>G
  hgvsp: ENSP00000340336.5:p.Glu233Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.530A>G
  hgvsp: ENSP00000316739.6:p.Glu177Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.488A>G
  hgvsp: ENSP00000415711.2:p.Glu163Gly
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26796
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu233Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-21799382-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799382
    reference: chr 1
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.708G>T
  hgvsp: ENSP00000316782.5:p.Glu236Asp
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.540G>T
  hgvsp: ENSP00000391865.1:p.Glu180Asp
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.708G>T
  hgvsp: ENSP00000340336.5:p.Glu236Asp
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.540G>T
  hgvsp: ENSP00000316739.6:p.Glu180Asp
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.498G>T
  hgvsp: ENSP00000415711.2:p.Glu166Asp
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5293
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu236Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-21799393-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799393
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799393
    reference: chr 1
allele count: 8
allele frequency: 6.59467480009892e-5
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.509A>G
  hgvsp: ENSP00000415711.2:p.Glu170Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.719A>G
  hgvsp: ENSP00000316782.5:p.Glu240Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.551A>G
  hgvsp: ENSP00000391865.1:p.Glu184Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.719A>G
  hgvsp: ENSP00000340336.5:p.Glu240Gly
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.551A>G
  hgvsp: ENSP00000316739.6:p.Glu184Gly
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9527
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26801
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3786
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4022
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12088
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu240Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ

1-21799398-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799398
    reference: chr 1
allele count: 5
allele frequency: 4.12275928033114e-5
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.514T>C
  hgvsp: ENSP00000415711.2:p.Tyr172His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.724T>C
  hgvsp: ENSP00000316782.5:p.Tyr242His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.556T>C
  hgvsp: ENSP00000391865.1:p.Tyr186His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.556T>C
  hgvsp: ENSP00000316739.6:p.Tyr186His
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.724T>C
  hgvsp: ENSP00000340336.5:p.Tyr242His
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr242His
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

1-21799403-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799403
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799403
    reference: chr 1
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.561C>G
  hgvsp: ENST00000434838.2:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.729C>G
  hgvsp: ENST00000342104.5:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.729C>G
  hgvsp: ENST00000318249.5:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.519C>G
  hgvsp: ENST00000454000.2:c.519C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.561C>G
  hgvsp: ENST00000318220.6:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26788
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala243Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-21799405-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799405
    reference: chr 1
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.521C>T
  hgvsp: ENSP00000415711.2:p.Pro174Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.563C>T
  hgvsp: ENSP00000391865.1:p.Pro188Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.731C>T
  hgvsp: ENSP00000316782.5:p.Pro244Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.563C>T
  hgvsp: ENSP00000316739.6:p.Pro188Leu
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.731C>T
  hgvsp: ENSP00000340336.5:p.Pro244Leu
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26788
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro244Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-21799413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799413
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799413
    reference: chr 1
allele count: 543
allele frequency: 4.48152916707933e-3
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+5C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+5C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+5C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+5C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+5C>T
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10003
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 9.75e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11614
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
hgvs: c.734+5C>T
num of homozygotes: 14
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-21799414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799414
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799414
    reference: chr 1
allele count: 5337
allele frequency: 4.405573624341682e-2
allele num: 121142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+6G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+6G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+6G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+6G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+6G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 4.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 9.75e1
  variant carriers: 2342
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 6.75e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.25e1
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.25e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 3.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 7.25e1
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 3.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 5.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 2.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 2.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 4.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 6.25e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11286
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 7.75e1
  variant carriers: 2
hgvs: c.734+6G>A
num of homozygotes: 181
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

1-21799416-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799416
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799416
    reference: chr 1
allele count: 10
allele frequency: 8.258047467256842e-5
allele num: 121094
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+8T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+8T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+8T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+8T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+8T>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7629
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3445
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 0
hgvs: c.734+8T>C
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

1-21799424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799424
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799424
    reference: chr 1
allele count: 5
allele frequency: 4.131070608258836e-5
allele num: 121034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+16C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+16C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+16C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+16C>T
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+16C>T
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

1-21799425-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799425
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799425
    reference: chr 1
allele count: 3
allele frequency: 2.479256884069948e-5
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+17G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+17G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+17G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+17G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+17G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3739
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

1-21799433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799433
    reference: chr 1
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+25G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+25G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+25G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+25G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+25G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-21799436-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799436
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799436
    reference: chr 1
allele count: 2
allele frequency: 1.654095540558423e-5
allele num: 120912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+28A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+28A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+28A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+28A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+28A>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6025
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9104
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-21799437-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799437
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799437
    reference: chr 1
allele count: 1
allele frequency: 8.269383434771103e-6
allele num: 120928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+29T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+29T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+29T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+29T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+29T>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26643
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-21799445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799445
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799445
    reference: chr 1
allele count: 2
allele frequency: 1.65508109897385e-5
allele num: 120840
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+37A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+37A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+37A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+37A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+37A>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
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genotype quality: GenotypeQuality
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 420
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genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 220
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9647
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

1-21799448-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799448
    reference: chr 1
allele count: 11
allele frequency: 9.103398050217654e-5
allele num: 120834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+40A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+40A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+40A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+40A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+40A>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8939
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3900
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genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-21799451-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799451
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799451
    reference: chr 1
allele count: 1
allele frequency: 8.279379377721846e-6
allele num: 120782
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+43T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+43T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+43T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+43T>C
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+43T>C
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8836
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3894
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26632
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4697
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

1-21799452-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799452
    reference: chr 1
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+44G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+44G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+44G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+44G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+44G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4608
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26619
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-21799454-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799454
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799454
    reference: chr 1
allele count: 2
allele frequency: 1.657907389293234e-5
allele num: 120634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+46A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+46A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+46A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+46A>G
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+46A>G
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26617
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7796
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-21799458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21799458
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21799458
    reference: chr 1
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000415711
  ensembl transcript: ENST00000454000
  gene symbol: NBPF3
  hgvsc: ENST00000454000.2:c.524+50G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000391865
  ensembl transcript: ENST00000434838
  gene symbol: NBPF3
  hgvsc: ENST00000434838.2:c.566+50G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000340336
  ensembl transcript: ENST00000342104
  gene symbol: NBPF3
  hgvsc: ENST00000342104.5:c.734+50G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316782
  ensembl transcript: ENST00000318249
  gene symbol: NBPF3
  hgvsc: ENST00000318249.5:c.734+50G>A
  variant of: http://identifiers.org/hgnc/25076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142794
  ensembl protein: ENSP00000316739
  ensembl transcript: ENST00000318220
  gene symbol: NBPF3
  hgvsc: ENST00000318220.6:c.566+50G>A
  variant of: http://identifiers.org/hgnc/25076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.79336e6

MQ
type: SiteQuality
SIO_000300: 5.757e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 6.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

VQSLOD
type: SiteQuality
SIO_000300: -1.394e0

QD
type: SiteQuality
SIO_000300: 1.137e1

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 35

GenotypeQuality
all individuals: 3103
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 2838
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 28

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 20

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 21

African
type: Population
allele count: 137
allele frequency: 1.385798098320858e-2
allele num: 9886
num of homozygotes: 0

East Asian
type: Population
allele count: 19
allele frequency: 2.215485074626866e-3
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 1.0e-2
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.036744609778318e-4
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 162
allele frequency: 1.479992691394117e-2
allele num: 10946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 349
allele frequency: 5.312509513806436e-3
allele num: 65694
num of homozygotes: 0

South Asian
type: Population
allele count: 105
allele frequency: 6.412605349945035e-3
allele num: 16374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.153e1

MQRankSum
type: SiteQuality
SIO_000300: -6.062e0

VQSLOD
type: SiteQuality
SIO_000300: -6.151e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.464e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 3.193831e6

GenotypeQuality
all individuals: 2929
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4513
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.832841691248771e-5
allele num: 10170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.466e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.77e0

DP
type: SiteQuality
SIO_000300: 2.679555e6

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.415e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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SIO_000300: -1.979e0

BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 2.679263e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

FS
type: SiteQuality
SIO_000300: 2.624e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

QD
type: SiteQuality
SIO_000300: 1.476e1

DP
type: SiteQuality
SIO_000300: 2.679934e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
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variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502746675472038e-5
allele num: 66626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 2.679934e6

MQ
type: SiteQuality
SIO_000300: 5.418e1

BaseQRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
SIO_000300: 2.624e0

VQSLOD
type: SiteQuality
SIO_000300: -1.907e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.325e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001290554938624e-5
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.355e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 5.625e1

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

FS
type: SiteQuality
SIO_000300: 5.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 2.679817e6

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
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variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 10
allele frequency: 8.637070305752289e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 102
allele frequency: 1.530474447078594e-3
allele num: 66646
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.68632e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.654e1

FS
type: SiteQuality
SIO_000300: 1.147e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

QD
type: SiteQuality
SIO_000300: 1.492e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 1983
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variant carriers: 0

GenotypeQuality
all individuals: 4510
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500990217847926e-5
allele num: 66652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.17e0

FS
type: SiteQuality
SIO_000300: 1.955e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.464e1

DP
type: SiteQuality
SIO_000300: 2.677572e6

MQ
type: SiteQuality
SIO_000300: 5.673e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 15177
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.756783134881905e-3
allele num: 10246
num of homozygotes: 0

South Asian
type: Population
allele count: 28
allele frequency: 1.695736434108527e-3
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.92e-2

QD
type: SiteQuality
SIO_000300: 1.471e1

MQ
type: SiteQuality
SIO_000300: 5.669e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

FS
type: SiteQuality
SIO_000300: 5.47e-1

DP
type: SiteQuality
SIO_000300: 2.680622e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.900273019111338e-4
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

Latino
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allele count: 46
allele frequency: 3.973738769868694e-3
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 869
allele frequency: 8.471436927276273e-2
allele num: 10258
num of homozygotes: 41

MQRankSum
type: SiteQuality
SIO_000300: -2.303e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.16e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

QD
type: SiteQuality
SIO_000300: 1.462e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 2.720076e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.703e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.513e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1975
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2918
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 113
allele frequency: 1.69476273321735e-3
allele num: 66676
num of homozygotes: 1

Other
type: Population
allele count: 12
allele frequency: 1.324503311258278e-2
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 229
allele frequency: 1.38687015503876e-2
allele num: 16512
num of homozygotes: 3

Latino
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allele count: 55
allele frequency: 4.750388668163759e-3
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 903
allele frequency: 8.778922807699786e-2
allele num: 10286
num of homozygotes: 43

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.507e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.654e1

DP
type: SiteQuality
SIO_000300: 2.734376e6

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1975
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GenotypeQuality
all individuals: 170
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GenotypeQuality
all individuals: 3169
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.999580058791769e-5
allele num: 66676
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
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QD
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ClippingRankSum
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SIO_000300: -3.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 5.654e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.43e-2

DP
type: SiteQuality
SIO_000300: 2.734376e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.161e0

DP
type: SiteQuality
SIO_000300: 2.681782e6

MQ
type: SiteQuality
SIO_000300: 5.765e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.342e0

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 36
allele frequency: 5.399568034557236e-4
allele num: 66672
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.947040498442368e-4
allele num: 10272
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.775e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.093e-1

DP
type: SiteQuality
SIO_000300: 2.683668e6

QD
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.817e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
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MQRankSum
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SIO_000300: -6.7e-2

DP
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

QD
type: SiteQuality
SIO_000300: 1.581e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.912e1

QD
type: SiteQuality
SIO_000300: 1.36e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

DP
type: SiteQuality
SIO_000300: 2.679823e6

FS
type: SiteQuality
SIO_000300: 1.109e0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.485e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.723e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.304e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e0

MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500315022051544e-5
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.791e1

FS
type: SiteQuality
SIO_000300: 1.947e0

DP
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.827e1

ClippingRankSum
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QD
type: SiteQuality
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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DP
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MQ
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.298e1

BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 380
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variant carriers: 0

South Asian
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allele count: 408
allele frequency: 2.471229557843731e-2
allele num: 16510
num of homozygotes: 14

Latino
type: Population
allele count: 210
allele frequency: 1.814411612234318e-2
allele num: 11574
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 324
allele frequency: 4.898699727850015e-2
allele num: 6614
num of homozygotes: 10

African
type: Population
allele count: 976
allele frequency: 9.538702111024237e-2
allele num: 10232
num of homozygotes: 51

European (Non-Finnish)
type: Population
allele count: 3274
allele frequency: 4.915915915915916e-2
allele num: 66600
num of homozygotes: 91

Other
type: Population
allele count: 29
allele frequency: 3.215077605321508e-2
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

QD
type: SiteQuality
SIO_000300: 1.473e1

DP
type: SiteQuality
SIO_000300: 2.671233e6

VQSLOD
type: SiteQuality
SIO_000300: 5.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.684e1

GenotypeQuality
all individuals: 4369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16441
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.744e0

VQSLOD
type: SiteQuality
SIO_000300: -1.523e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.365606e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.317e0

MQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

MQ
type: SiteQuality
SIO_000300: 5.707e1

FS
type: SiteQuality
SIO_000300: 8.525e0

QD
type: SiteQuality
SIO_000300: 1.034e1

GenotypeQuality
all individuals: 18713
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6785
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423361201987156e-4
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 24
allele frequency: 2.774566473988439e-3
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004446580939791e-5
allele num: 66568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.45e-1

DP
type: SiteQuality
SIO_000300: 2.365788e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.097e0

FS
type: SiteQuality
SIO_000300: 2.043e0

VQSLOD
type: SiteQuality
SIO_000300: -3.157e-1

MQ
type: SiteQuality
SIO_000300: 5.822e1

QD
type: SiteQuality
SIO_000300: 1.268e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 3422
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variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18680
bin: 9.75e1
variant carriers: 41

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.635967038293747e-3
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.953653331730336e-4
allele num: 66542
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.337e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.319e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.51e-1

DP
type: SiteQuality
SIO_000300: 2.362253e6

QD
type: SiteQuality
SIO_000300: 1.42e1

FS
type: SiteQuality
SIO_000300: 5.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 5.627e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

GenotypeQuality
all individuals: 4376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16364
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6782
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variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202103681442524e-4
allele num: 66550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.036e0

FS
type: SiteQuality
SIO_000300: 3.459e0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 2.359262e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.33e0

MQ
type: SiteQuality
SIO_000300: 5.725e1

QD
type: SiteQuality
SIO_000300: 1.223e1

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 6782
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.010518407212622e-5
allele num: 66550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.036e0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 2.359262e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.33e0

QD
type: SiteQuality
SIO_000300: 1.223e1

MQ
type: SiteQuality
SIO_000300: 5.725e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 3.459e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

GenotypeQuality
all individuals: 2111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504619180885318e-5
allele num: 66462
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.352926e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQ
type: SiteQuality
SIO_000300: 5.803e1

VQSLOD
type: SiteQuality
SIO_000300: -1.627e0

QD
type: SiteQuality
SIO_000300: 1.916e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.675e0

FS
type: SiteQuality
SIO_000300: 1.1587e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3425
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3147
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GenotypeQuality
all individuals: 18658
bin: 9.75e1
variant carriers: 21

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.860584161397169e-4
allele num: 66420
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.453e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.898e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e0

MQ
type: SiteQuality
SIO_000300: 5.832e1

QD
type: SiteQuality
SIO_000300: 1.17e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.351311e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
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GenotypeQuality
all individuals: 840
bin: 2.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506977304921788e-5
allele num: 66358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 4.92e0

DP
type: SiteQuality
SIO_000300: 2.349408e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.785e0

VQSLOD
type: SiteQuality
SIO_000300: -3.107e0

MQ
type: SiteQuality
SIO_000300: 5.61e1

QD
type: SiteQuality
SIO_000300: 3.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.229e0

GenotypeQuality
all individuals: 4847
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variant carriers: 0

GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 136
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GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014408874419726e-5
allele num: 66348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.203e1

FS
type: SiteQuality
SIO_000300: 4.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.79e1

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.277e0

VQSLOD
type: SiteQuality
SIO_000300: -2.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.579e0

DP
type: SiteQuality
SIO_000300: 2.341433e6

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 1066
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GenotypeQuality
all individuals: 3416
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017046311660884e-5
allele num: 66290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.337e-1

MQ
type: SiteQuality
SIO_000300: 5.712e1

QD
type: SiteQuality
SIO_000300: 1.468e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3090
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variant carriers: 0

GenotypeQuality
all individuals: 4835
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GenotypeQuality
all individuals: 2087
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.010858636637844e-4
allele num: 9946
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.090000000000001e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.13e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

DP
type: SiteQuality
SIO_000300: 2.33528e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.01328769881216e-4
allele num: 9934
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 5.815e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.848e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.382e0

DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9750
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 5.877e1

VQSLOD
type: SiteQuality
SIO_000300: -9.442e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.283258e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 36

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515151515151515e-5
allele num: 66000
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

East Asian
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allele count: 35
allele frequency: 4.08115671641791e-3
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.151e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

MQ
type: SiteQuality
SIO_000300: 5.842e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

QD
type: SiteQuality
SIO_000300: 1.325e1

DP
type: SiteQuality
SIO_000300: 2.261155e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65996
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

DP
type: SiteQuality
SIO_000300: 2.257222e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.445e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

QD
type: SiteQuality
SIO_000300: 1.905e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

FS
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.701421e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66554
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
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East Asian
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allele frequency: 0.0e0
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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African
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Other
type: Population
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
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East Asian
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allele num: 8640
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

MQRankSum
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ClippingRankSum
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QD
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 160

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 139
allele frequency: 2.083708100977394e-3
allele num: 66708
num of homozygotes: 0

East Asian
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Other
type: Population
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allele num: 906
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Latino
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allele frequency: 6.045949214026602e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele count: 12
allele frequency: 1.153402537485583e-3
allele num: 10404
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South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

QD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

DP
type: SiteQuality
SIO_000300: 2.735691e6

FS
type: SiteQuality
SIO_000300: 3.035e0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12241
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5338
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 3.035e0

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 2.735691e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.465e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12241
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 3.035e0

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

QD
type: SiteQuality
SIO_000300: 1.465e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.735691e6

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 3.035e0

QD
type: SiteQuality
SIO_000300: 1.465e1

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.735691e6

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 2146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.155e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

DP
type: SiteQuality
SIO_000300: 2.735093e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.807e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3808
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12256
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variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

FS
type: SiteQuality
SIO_000300: 4.872e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

QD
type: SiteQuality
SIO_000300: 7.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.735418e6

GenotypeQuality
all individuals: 3807
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 4.741e0

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.735111e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e0

VQSLOD
type: SiteQuality
SIO_000300: -7.548e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e0

GenotypeQuality
all individuals: 12250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3806
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26801
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.84613520717228e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.425e0

FS
type: SiteQuality
SIO_000300: 1.144e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 2.73495e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 1.658e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.014e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.802e0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 2.733908e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3797
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 26795
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

FS
type: SiteQuality
SIO_000300: 1.989e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.73263e6

QD
type: SiteQuality
SIO_000300: 8.34e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.006e0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.859676831490706e-4
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 2.73122e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

FS
type: SiteQuality
SIO_000300: 2.471e0

QD
type: SiteQuality
SIO_000300: 1.246e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 26794
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4013
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variant carriers: 0

GenotypeQuality
all individuals: 12003
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.815100154083205e-4
allele num: 10384
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.839e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 2.730216e6

QD
type: SiteQuality
SIO_000300: 1.439e1

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeQuality
all individuals: 3782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4003
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998860433035446e-5
allele num: 66692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 1.004e1

DP
type: SiteQuality
SIO_000300: 2.728516e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.864e1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.077e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3408
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GenotypeQuality
all individuals: 4002
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.744e0

DP
type: SiteQuality
SIO_000300: 2.72778e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 525

GenotypeQuality
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GenotypeQuality
all individuals: 5120
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.828376401755241e-4
allele num: 16408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.399076101628821e-4
allele num: 66674
num of homozygotes: 0

Latino
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allele count: 20
allele frequency: 1.727712508638563e-3
allele num: 11576
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 460
allele frequency: 4.44960340491391e-2
allele num: 10338
num of homozygotes: 13

Other
type: Population
allele count: 4
allele frequency: 4.415011037527594e-3
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.322e1

DP
type: SiteQuality
SIO_000300: 2.753033e6

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.46e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

FS
type: SiteQuality
SIO_000300: 6.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5140

GenotypeQuality
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GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 216
allele frequency: 1.865929509329647e-2
allele num: 11576
num of homozygotes: 3

Other
type: Population
allele count: 30
allele frequency: 3.311258278145696e-2
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 408
allele frequency: 2.488108305890962e-2
allele num: 16398
num of homozygotes: 14

European (Finnish)
type: Population
allele count: 324
allele frequency: 4.898699727850015e-2
allele num: 6614
num of homozygotes: 10

African
type: Population
allele count: 1082
allele frequency: 1.047434656340755e-1
allele num: 10330
num of homozygotes: 63

European (Non-Finnish)
type: Population
allele count: 3277
allele frequency: 4.914959354471008e-2
allele num: 66674
num of homozygotes: 91

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.563e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.05e0

DP
type: SiteQuality
SIO_000300: 3.000265e6

QD
type: SiteQuality
SIO_000300: 1.473e1

GenotypeQuality
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variant carriers: 10

GenotypeQuality
all individuals: 3746
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.27037579306979e-4
allele num: 16392
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.453e0

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

QD
type: SiteQuality
SIO_000300: 1.199e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

DP
type: SiteQuality
SIO_000300: 2.761906e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.000420029402058e-5
allele num: 66662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.28e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.465e1

DP
type: SiteQuality
SIO_000300: 2.758244e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 2086
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GenotypeQuality
all individuals: 12
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.748488984207447e-5
allele num: 10258
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110975311659741e-5
allele num: 16364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

QD
type: SiteQuality
SIO_000300: 1.446e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 2.757026e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8636
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.591e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.923e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.637e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 2.747598e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.116956202593589e-5
allele num: 16348
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

DP
type: SiteQuality
SIO_000300: 2.747092e6

FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
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allele frequency: 6.113216774666829e-5
allele num: 16358
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
type: Population
allele count: 0
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allele num: 906
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MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0482e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
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South Asian
type: Population
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Latino
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East Asian
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African
type: Population
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26638
bin: 9.75e1
variant carriers: 11

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8628
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.501636784094663e-4
allele num: 66594
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
type: Population
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allele frequency: 6.118453255017132e-5
allele num: 16344
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.39e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

DP
type: SiteQuality
SIO_000300: 2.735598e6

GenotypeQuality
all individuals: 3442
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.122199093914534e-5
allele num: 16334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.731917e6

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

FS
type: SiteQuality
SIO_000300: 6.403e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503623733197005e-5
allele num: 66506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.788e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 3.455e0

DP
type: SiteQuality
SIO_000300: 2.731592e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.286e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

GenotypeQuality
all individuals: 4520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322340919647004e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.508e1

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

DP
type: SiteQuality
SIO_000300: 2.7296e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1