2-74649388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649388
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649388
    reference: chr 2
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+445G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+445G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.498G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.108G>A
  hgvsp: ENST00000426787.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.108G>A
  hgvsp: ENST00000348227.4:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.496G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.518G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.87G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.200G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val36Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

2-74649394-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649394
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649394
    reference: chr 2
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.504T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.206T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+451T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.524T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.202T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.114T>C
  hgvsp: ENST00000426787.1:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.114T>C
  hgvsp: ENST00000348227.4:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+451T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.502T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.202T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.93T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.202T>C
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His38His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/2-74649399-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649399
    reference: chr 2
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.207C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.207C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.529C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.207C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.119C>A
  hgvsp: ENSP00000406606.1:p.Pro40Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+456C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+456C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.211C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.507C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.119C>A
  hgvsp: ENSP00000006526.6:p.Pro40Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.98C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.509C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro40Gln
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

2-74649402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649402
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649402
    reference: chr 2
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.122G>A
  hgvsp: ENSP00000006526.6:p.Ser41Asn
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.512G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.101G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.210G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.122G>A
  hgvsp: ENSP00000406606.1:p.Ser41Asn
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+459G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.510G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.532G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+459G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.210G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.214G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.210G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser41Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/2-74649403-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649403
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649403
    reference: chr 2
allele count: 3
allele frequency: 2.485913158766987e-5
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.211C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+460C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+460C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.533C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.211C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.513C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.215C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.123C>A
  hgvsp: ENSP00000406606.1:p.Ser41Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.102C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.123C>A
  hgvsp: ENSP00000006526.6:p.Ser41Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.211C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.511C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31426
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser41Arg
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

2-74649403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649403
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649403
    reference: chr 2
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.211C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.123C>T
  hgvsp: ENST00000426787.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+460C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+460C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.211C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.511C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.211C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.123C>T
  hgvsp: ENST00000348227.4:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.102C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.533C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.215C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.513C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser41Ser
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

2-74649409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649409
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649409
    reference: chr 2
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.517G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+466G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.217G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.539G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+466G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.129G>A
  hgvsp: ENST00000426787.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.519G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.221G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.217G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.217G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.108G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.129G>A
  hgvsp: ENST00000348227.4:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln43Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

2-74649415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649415
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649415
    reference: chr 2
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.523C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.114C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.545C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.223C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.135C>T
  hgvsp: ENST00000426787.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.227C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.135C>T
  hgvsp: ENST00000348227.4:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+472C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.525C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.223C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.223C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+472C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu45Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

2-74649418-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649418
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649418
    reference: chr 2
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+475C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.226C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+475C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.226C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.138C>T
  hgvsp: ENST00000348227.4:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.548C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.230C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.117C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.138C>T
  hgvsp: ENST00000426787.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.526C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.528C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.226C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser46Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-74649430-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649430
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649430
    reference: chr 2
allele count: 3
allele frequency: 2.489915840844579e-5
allele num: 120486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+487G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.540G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.150G>T
  hgvsp: ENSP00000006526.6:p.Glu50Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.150G>T
  hgvsp: ENSP00000406606.1:p.Glu50Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.238G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.129G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.238G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+487G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.242G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.560G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.238G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.538G>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu50Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

2-74649431-GGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649431
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649429
    reference: chr 2
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.243_244delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+492_139+493delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.247_248delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.243_244delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.243_244delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.134_135delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.155_156delTG
  hgvsp: ENSP00000406606.1:p.Val52AlafsTer10
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.565_566delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+492_66+493delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.543_544delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.155_156delTG
  hgvsp: ENSP00000006526.6:p.Val52AlafsTer10
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.545_546delTG
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val52AlafsTer10
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GGT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

2-74649439-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649439
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649438
    reference: chr 2
allele count: 2
allele frequency: 1.663616702711695e-5
allele num: 120220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.571delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.161delT
  hgvsp: ENSP00000006526.6:p.Leu54TrpfsTer14
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.140delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.249delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.549delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.249delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+498delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.161delT
  hgvsp: ENSP00000406606.1:p.Leu54TrpfsTer14
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.249delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+498delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.253delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.551delT
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu54TrpfsTer14
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: CT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/2-74649453-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649453
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649453
    reference: chr 2
allele count: 1
allele frequency: 8.345712807330875e-6
allele num: 119822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.265A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+510A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.261A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.173A>C
  hgvsp: ENSP00000406606.1:p.Gln58Pro
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+510A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.561A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.261A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.173A>C
  hgvsp: ENSP00000006526.6:p.Gln58Pro
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.152A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.583A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.261A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.563A>C
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30873
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln58Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/2-74649460-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649460
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649460
    reference: chr 2
allele count: 1
allele frequency: 8.375209380234507e-6
allele num: 119400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.268C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.570C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.590C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.159C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.268C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.568C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+517C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.180C>A
  hgvsp: ENSP00000406606.1:p.His60Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.180C>A
  hgvsp: ENSP00000006526.6:p.His60Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.272C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+517C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.268C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His60Gln
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

2-74649461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649461
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649461
    reference: chr 2
allele count: 271
allele frequency: 2.272117512911664e-3
allele num: 119272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.269G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.569G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+518G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.181G>A
  hgvsp: ENSP00000006526.6:p.Ala61Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.273G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.160G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.269G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.269G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.571G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.591G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.181G>A
  hgvsp: ENSP00000406606.1:p.Ala61Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+518G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 16845
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 30539
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Ala61Thr
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-74649462-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649462
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649462
    reference: chr 2
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.270C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+519C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.572C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.570C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.182C>A
  hgvsp: ENSP00000406606.1:p.Ala61Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.274C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+519C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.182C>A
  hgvsp: ENSP00000006526.6:p.Ala61Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.161C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.270C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.270C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.592C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala61Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

2-74649462-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649462
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649462
    reference: chr 2
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.570C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.182C>G
  hgvsp: ENSP00000406606.1:p.Ala61Gly
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.274C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+519C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+519C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.182C>G
  hgvsp: ENSP00000006526.6:p.Ala61Gly
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.270C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.161C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.270C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.270C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.572C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.592C>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala61Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

2-74649466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649466
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649466
    reference: chr 2
allele count: 2
allele frequency: 1.687023415885013e-5
allele num: 118552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.274G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.274G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.139+523G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.186G>A
  hgvsp: ENST00000348227.4:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.596G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.574G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.274G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.186G>A
  hgvsp: ENST00000426787.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.278G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.165G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.66+523G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.576G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys62Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

2-74649471-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649471
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649471
    reference: chr 2
allele count: 2
allele frequency: 1.691360530410662e-5
allele num: 118248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.279G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.279G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-526G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-526G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.191G>T
  hgvsp: ENSP00000406606.1:p.Gly64Val
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.191G>T
  hgvsp: ENSP00000006526.6:p.Gly64Val
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.283G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.279G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.170G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.601G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.579G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.581G>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29894
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly64Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

2-74649479-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649479
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649479
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 117202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.589G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.587G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.291G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.287G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.609G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.287G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.199G>A
  hgvsp: ENSP00000406606.1:p.Val67Met
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.178G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-518G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.199G>A
  hgvsp: ENSP00000006526.6:p.Val67Met
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.287G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-518G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val67Met
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-74649482-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649482
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649482
    reference: chr 2
allele count: 3
allele frequency: 2.575284139683412e-5
allele num: 116492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.290A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.202A>C
  hgvsp: ENSP00000006526.6:p.Ser68Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.202A>C
  hgvsp: ENSP00000406606.1:p.Ser68Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.290A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.181A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-515A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-515A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.294A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.612A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.590A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.290A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.592A>C
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser68Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

2-74649483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649483
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649483
    reference: chr 2
allele count: 1
allele frequency: 8.607629803057431e-6
allele num: 116176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-514G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.291G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.613G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.593G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.203G>A
  hgvsp: ENSP00000406606.1:p.Ser68Asn
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.291G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.591G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.291G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.203G>A
  hgvsp: ENSP00000006526.6:p.Ser68Asn
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.295G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.182G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-514G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser68Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-74649485-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649485
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649485
    reference: chr 2
allele count: 4
allele frequency: 3.465784046996031e-5
allele num: 115414
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.297C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.595C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.205C>A
  hgvsp: ENSP00000006526.6:p.Pro69Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.593C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.293C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.615C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.184C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.205C>A
  hgvsp: ENSP00000406606.1:p.Pro69Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.293C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-512C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.293C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-512C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro69Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

2-74649490-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649490
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649490
    reference: chr 2
allele count: 1
allele frequency: 8.800028160090112e-6
allele num: 113636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.298A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.598A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.600A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-507A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-507A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.210A>G
  hgvsp: ENST00000348227.4:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.298A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.302A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.210A>G
  hgvsp: ENST00000426787.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.620A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.189A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.298A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro70Pro
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

2-74649494-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649494
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649494
    reference: chr 2
allele count: 1
allele frequency: 8.950628334109055e-6
allele num: 111724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.602A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.604A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.214A>G
  hgvsp: ENSP00000406606.1:p.Ile72Val
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.302A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.624A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.193A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.214A>G
  hgvsp: ENSP00000006526.6:p.Ile72Val
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.302A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.302A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-503A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-503A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.306A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile72Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

2-74649495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649495
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649495
    reference: chr 2
allele count: 1
allele frequency: 8.99830831803621e-6
allele num: 111132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.215T>C
  hgvsp: ENSP00000406606.1:p.Ile72Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-502T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.307T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.603T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.625T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.303T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.303T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-502T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.303T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.215T>C
  hgvsp: ENSP00000006526.6:p.Ile72Thr
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.194T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.605T>C
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14409
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile72Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD

2-74649500-C-CAGGTGAGTGATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649500
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649512
    reference: chr 2
allele count: 1
allele frequency: 9.329054407045302e-6
allele num: 107192
alternate allele: CAGGTGAGTGATA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-74649518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649518
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649518
    reference: chr 2
allele count: 1
allele frequency: 1.057305984351871e-5
allele num: 94580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-479G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.326G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.648G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+16G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.626G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-479G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+16G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

2-74649525-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649525
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649525
    reference: chr 2
allele count: 1
allele frequency: 1.115747662508647e-5
allele num: 89626
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.655A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.333A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+23A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.633A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-472A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-472A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+23A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

2-74649528-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649528
    reference: chr 2
allele count: 1
allele frequency: 1.133427029967811e-5
allele num: 88228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-469T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.336T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.636T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-469T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+26T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.658T>C
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-74649530-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649530
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649530
    reference: chr 2
allele count: 1
allele frequency: 1.173350855372774e-5
allele num: 85226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.660G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.338G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-467G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.638G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+28G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-467G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum

2-74649532-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649532
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649532
    reference: chr 2
allele count: 128
allele frequency: 1.516623616673381e-3
allele num: 84398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-465T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.640T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.340T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-465T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+30T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.662T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+30T>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27615
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

2-74649536-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649536
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649536
    reference: chr 2
allele count: 1
allele frequency: 1.307839188093432e-5
allele num: 76462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-461C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-461C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.644C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.666C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.344C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+34C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+34C>G
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25522
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-74649540-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649540
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649540
    reference: chr 2
allele count: 3
allele frequency: 3.974246880216199e-5
allele num: 75486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-457G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.670G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.648G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.348G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+38G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-457G>T
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25135
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17846
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-74649547-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649547
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649547
    reference: chr 2
allele count: 1
allele frequency: 1.504166541319455e-5
allele num: 66482
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-450C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.655C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-450C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.355C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.677C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+45C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+45C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21553
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

2-74649551-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649551
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649551
    reference: chr 2
allele count: 1
allele frequency: 1.59586352175162e-5
allele num: 62662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-446A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.681A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-446A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.659A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+49A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.359A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+49A>T
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20217
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/2-74649553-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649553
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649553
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 58622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-444C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.683C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.661C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+51C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.361C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-444C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+51C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4887
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23654
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-74649554-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649554
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649553
    reference: chr 2
allele count: 1
allele frequency: 1.701374710766299e-5
allele num: 58776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.310+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.310+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.201+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.222+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.612+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000475328
  gene symbol: WDR54
  hgvsc: ENST00000475328.1:n.366delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.222+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.688delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-439delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.314+56delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.666delT
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-439delT
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19830
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: CT
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/2-74649948-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649948
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649948
    reference: chr 2
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1056C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1078C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-49C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-49C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12281
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/2-74649949-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649949
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649949
    reference: chr 2
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1079A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1057A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-48A>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-48A>C
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

2-74649975-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649975
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649975
    reference: chr 2
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1083A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1105A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-22A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-22A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-74649976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649976
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649976
    reference: chr 2
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1084C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1106C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-21C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-21C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-74649978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649978
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649978
    reference: chr 2
allele count: 23
allele frequency: 1.895750222544591e-4
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1108C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1086C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-19C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-19C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15443
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13239
  bin: 9.75e1
  variant carriers: 23
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

2-74649983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649983
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649983
    reference: chr 2
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1113G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1091G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-14G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-14G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13219
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-74649984-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649984
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649984
    reference: chr 2
allele count: 4
allele frequency: 3.296250515039143e-5
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1092C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1114C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-13C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-13C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

2-74649985-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649985
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649985
    reference: chr 2
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1115A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1093A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-12A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-12A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-74649989-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649989
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649989
    reference: chr 2
allele count: 4
allele frequency: 3.29549012176836e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1097C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-8C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1119C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-8C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.223-8C>A
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/2-74649990-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649990
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649990
    reference: chr 2
allele count: 4
allele frequency: 3.29549012176836e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1120C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1098C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-7C>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-7C>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.223-7C>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-74649992-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649992
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649992
    reference: chr 2
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1100T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-5T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1122T>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-5T>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.223-5T>A
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

2-74649995-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74649995
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74649995
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.202-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.223-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.613-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.67-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1103A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.223-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.311-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.140-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.315-2A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1125A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.311-2A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19356
  bin: 6.25e1
  variant carriers: 0
hgvs: c.223-2A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

2-74650000-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650000
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650000
    reference: chr 2
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.70C>G
  hgvsp: ENSP00000387236.1:p.His24Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.314C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1130C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.226C>G
  hgvsp: ENSP00000006526.6:p.His76Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.226C>G
  hgvsp: ENSP00000406606.1:p.His76Asp
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.314C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.318C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.143C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.616C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.205C>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1108C>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His76Asp
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-74650010-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650010
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650009
    reference: chr 2
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.330delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.238delC
  hgvsp: ENSP00000406606.1:p.Leu80SerfsTer59
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1120delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1142delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.155delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.628delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.217delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.238delC
  hgvsp: ENSP00000006526.6:p.Leu80SerfsTer77
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.326delC
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.82delC
  hgvsp: ENSP00000387236.1:p.Leu28SerfsTer77
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.326delC
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu80SerfsTer77
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: TC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

2-74650023-AGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650023
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650021
    reference: chr 2
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.168_169delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1133_1134delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.339_340delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.641_642delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.95_96delTG
  hgvsp: ENSP00000387236.1:p.Val32AlafsTer62
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.251_252delTG
  hgvsp: ENSP00000006526.6:p.Val84AlafsTer62
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.251_252delTG
  hgvsp: ENSP00000406606.1:p.Val84AlafsTer44
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1155_1156delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.230_231delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.339_340delTG
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.343_344delTG
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19331
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val84AlafsTer62
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: AGT
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

2-74650032-G-GCCCAAGGGCCGTGCGTACGTGCGTCGTCTCTATGGTGGCGGCGGATTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650032
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650080
    reference: chr 2
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: GCCCAAGGGCCGTGCGTACGTGCGTCGTCTCTATGGTGGCGGCGGATTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-74650046-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650046
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650046
    reference: chr 2
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.272A>G
  hgvsp: ENSP00000006526.6:p.His91Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.189A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1176A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.360A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.116A>G
  hgvsp: ENSP00000387236.1:p.His39Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.251A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.272A>G
  hgvsp: ENSP00000406606.1:p.His91Arg
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.662A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.360A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1154A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.364A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His91Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

2-74650046-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650046
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650046
    reference: chr 2
allele count: 2
allele frequency: 1.647853670594051e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1154A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.251A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.116A>T
  hgvsp: ENSP00000387236.1:p.His39Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.364A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.360A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.272A>T
  hgvsp: ENSP00000006526.6:p.His91Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.189A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.272A>T
  hgvsp: ENSP00000406606.1:p.His91Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.360A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1176A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.662A>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13219
  bin: 9.75e1
  variant carriers: 2
hgvs: p.His91Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

2-74650048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650048
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650048
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.366C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.274C>T
  hgvsp: ENSP00000006526.6:p.Arg92Ter
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.253C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.664C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.118C>T
  hgvsp: ENSP00000387236.1:p.Arg40Ter
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.274C>T
  hgvsp: ENSP00000406606.1:p.Arg92Ter
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.362C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1156C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1178C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.191C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.362C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4357
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg92Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

2-74650049-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650049
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650049
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.192G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.275G>A
  hgvsp: ENSP00000006526.6:p.Arg92Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.363G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.254G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.367G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.665G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.119G>A
  hgvsp: ENSP00000387236.1:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1179G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.275G>A
  hgvsp: ENSP00000406606.1:p.Arg92Gln
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.363G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1157G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg92Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

2-74650058-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650058
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650058
    reference: chr 2
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.263A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.201A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.284A>T
  hgvsp: ENSP00000406606.1:p.Gln95Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.128A>T
  hgvsp: ENSP00000387236.1:p.Gln43Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.372A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.372A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1166A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.284A>T
  hgvsp: ENSP00000006526.6:p.Gln95Leu
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.376A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.674A>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1188A>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln95Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

2-74650060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650060
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650060
    reference: chr 2
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+1G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.374G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+1G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: c.285+1G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

2-74650060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650060
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650060
    reference: chr 2
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.374G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+1G>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+1G>T
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.285+1G>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

2-74650063-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650063
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650063
    reference: chr 2
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+4A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.377A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+4A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.285+4A>G
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

2-74650088-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650088
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650088
    reference: chr 2
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.402A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+29A>G
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+29A>G
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

2-74650094-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650094
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650094
    reference: chr 2
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.408G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+35G>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+35G>C
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7419
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-74650096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650096
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650096
    reference: chr 2
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469932
  gene symbol: WDR54
  hgvsc: ENST00000469932.1:n.410C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.373+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.202+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.675+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1189+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.285+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.264+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1167+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.377+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.129+37C>T
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.285+37C>T
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

2-74650400-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650400
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650400
    reference: chr 2
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.286-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.286-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.378-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1168-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1190-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.285G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.374-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.676-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.265-46G>A
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.130-46G>A
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-74650404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650404
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650404
    reference: chr 2
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000006526
  ensembl transcript: ENST00000348227
  gene symbol: WDR54
  hgvsc: ENST00000348227.4:c.286-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000406606
  ensembl transcript: ENST00000426787
  gene symbol: WDR54
  hgvsc: ENST00000426787.1:c.286-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000461531
  gene symbol: WDR54
  hgvsc: ENST00000461531.1:n.289T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000493982
  gene symbol: WDR54
  hgvsc: ENST00000493982.1:n.374-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000468778
  gene symbol: WDR54
  hgvsc: ENST00000468778.1:n.1168-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000482880
  gene symbol: WDR54
  hgvsc: ENST00000482880.1:n.676-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000480089
  gene symbol: WDR54
  hgvsc: ENST00000480089.1:n.378-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl protein: ENSP00000387236
  ensembl transcript: ENST00000409791
  gene symbol: WDR54
  hgvsc: ENST00000409791.1:c.130-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000469321
  gene symbol: WDR54
  hgvsc: ENST00000469321.1:n.265-42T>C
  variant of: http://identifiers.org/hgnc/25770
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005448
  ensembl transcript: ENST00000465134
  gene symbol: WDR54
  hgvsc: ENST00000465134.1:n.1190-42T>C
  variant of: http://identifiers.org/hgnc/25770
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15534
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8503
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

2-74650407-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74650407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 74650407
    reference: chr 2
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7422
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508432135638218e-5
allele num: 66294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.757e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.643977e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

GenotypeDepth
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1626
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.908e1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

FS
type: SiteQuality
SIO_000300: 2.441e0

DP
type: SiteQuality
SIO_000300: 1.643932e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.343e1

GenotypeDepth
all individuals: 17274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46722
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 631
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.733307377846993e-5
allele num: 10274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

QD
type: SiteQuality
SIO_000300: 1.339e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 5.608e0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e0

MQRankSum
type: SiteQuality
SIO_000300: -8.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.643574e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

GenotypeDepth
all individuals: 172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46735
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.74e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.65e-1

FS
type: SiteQuality
SIO_000300: 2.431e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.129e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.643278e6

GenotypeDepth
all individuals: 77
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.526662039412137e-5
allele num: 66274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 1.226e1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

DP
type: SiteQuality
SIO_000300: 1.643274e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

GenotypeDepth
all individuals: 31426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

DP
type: SiteQuality
SIO_000300: 1.643274e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.226e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeDepth
all individuals: 78
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66252
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.35e0

BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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ReadPosRankSum
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SIO_000300: 2.27e0

ClippingRankSum
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SIO_000300: -1.411e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

QD
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SIO_000300: 1.348e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.956e1

BaseQRankSum
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FS
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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SIO_000300: 1.642118e6

VQSLOD
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SIO_000300: 4.65e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66252
num of homozygotes: 0

South Asian
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allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.272e1

ReadPosRankSum
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SIO_000300: 3.48e-1

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 2.01e-1

MQRankSum
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MQ
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.83e-1

VQSLOD
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SIO_000300: 2.77e-1

DP
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SIO_000300: 1.641572e6

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 46491
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533228565384267e-5
allele num: 66178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.273e0

BaseQRankSum
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SIO_000300: -1.902e0

ClippingRankSum
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SIO_000300: 4.47e-1

DP
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SIO_000300: 1.638501e6

MQRankSum
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VQSLOD
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SIO_000300: 3.3e-2

QD
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SIO_000300: 1.063e1

FS
type: SiteQuality
SIO_000300: 2.927e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511624391571182e-5
allele num: 66154
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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DP
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QD
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 6.64e-1

MQ
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SIO_000300: 6.099e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66052
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6600
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Latino
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allele frequency: 1.739432944859976e-4
allele num: 11498
num of homozygotes: 0

East Asian
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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FS
type: SiteQuality
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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African
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allele num: 10142
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South Asian
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European (Non-Finnish)
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MQ
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.523832744118006e-5
allele num: 65624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.97e1

VQSLOD
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BaseQRankSum
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SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

DP
type: SiteQuality
SIO_000300: 1.617671e6

QD
type: SiteQuality
SIO_000300: 1.633e1

GenotypeDepth
all individuals: 102
bin: 5.75e1
variant carriers: 16

GenotypeQuality
all individuals: 7100
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.75e1
variant carriers: 268

European (Non-Finnish)
type: Population
allele count: 238
allele frequency: 3.630816170861937e-3
allele num: 65550
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 29
allele frequency: 4.397937518956627e-3
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.386004514672686e-3
allele num: 886
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.940357852882704e-5
allele num: 10060
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 5.570000000000001e-1

QD
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SIO_000300: 1.369e1

InbreedingCoeff
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SIO_000300: 9.7e-3

VQSLOD
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SIO_000300: 5.82e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

BaseQRankSum
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SIO_000300: -1.809e0

DP
type: SiteQuality
SIO_000300: 1.617179e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 220
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GenotypeQuality
all individuals: 255
bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525739220652406e-5
allele num: 65542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.166e1

DP
type: SiteQuality
SIO_000300: 1.611726e6

BaseQRankSum
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SIO_000300: -2.442e0

InbreedingCoeff
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SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.332e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.320000000000001e-1

GenotypeDepth
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 543
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65542
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.181233774261343e-5
allele num: 16178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 1.611726e6

FS
type: SiteQuality
SIO_000300: 5.332e0

QD
type: SiteQuality
SIO_000300: 1.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.442e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.320000000000001e-1

GenotypeDepth
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1165
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variant carriers: 2

GenotypeQuality
all individuals: 360
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.76242509693338e-4
allele num: 11348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.59727e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 5.768e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 1.452e1

GenotypeDepth
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 383
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GenotypeQuality
all individuals: 121
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GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 1161
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GenotypeQuality
all individuals: 2789
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GenotypeQuality
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GenotypeQuality
all individuals: 127
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GenotypeQuality
all individuals: 6716
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53997782431933e-5
allele num: 64936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.228201295465869e-5
allele num: 16056
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.074e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 3.628e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.589309e6

QD
type: SiteQuality
SIO_000300: 1.069e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1155
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GenotypeQuality
all individuals: 222
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64314
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
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VQSLOD
type: SiteQuality
SIO_000300: 6.31e-1

QD
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FS
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.047921359819783e-4
allele num: 9766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.356470887363335e-5
allele num: 15732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -3.59e0

VQSLOD
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MQRankSum
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SIO_000300: -8.0e-3

ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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SIO_000300: -8.0e-4

QD
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DP
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SIO_000300: 1.54635e6

ReadPosRankSum
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SIO_000300: 7.36e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63284
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 4
allele frequency: 4.126263668248401e-4
allele num: 9694
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
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SIO_000300: 1.2e-2

InbreedingCoeff
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BaseQRankSum
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DP
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FS
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MQ
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SIO_000300: 6.0e1

VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele num: 62238
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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MQ
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SIO_000300: 6.0e1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61102
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.314456035767511e-5
allele num: 10736
num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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South Asian
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InbreedingCoeff
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SIO_000300: -1.3e-3

BaseQRankSum
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MQRankSum
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SIO_000300: -1.619e0

ClippingRankSum
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DP
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FS
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MQ
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: 4.5e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60776
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

Latino
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allele frequency: 9.380863039399625e-5
allele num: 10660
num of homozygotes: 0

European (Finnish)
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South Asian
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African
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele num: 58532
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African
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Other
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FS
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ClippingRankSum
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MQ
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QD
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

European (Non-Finnish)
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Other
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East Asian
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European (Finnish)
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Latino
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South Asian
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VQSLOD
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MQRankSum
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DP
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 409
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.219512195121951e-4
allele num: 8200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

DP
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SIO_000300: 9.02709e5

FS
type: SiteQuality
SIO_000300: 2.173e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeDepth
all individuals: 13840
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 441
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095030587446577e-5
allele num: 47732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.76e0

MQRankSum
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SIO_000300: 1.23e0

VQSLOD
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SIO_000300: -6.167e-1

QD
type: SiteQuality
SIO_000300: 1.039e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.77861e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1015
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GenotypeQuality
all individuals: 357
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.2223318533136e-5
allele num: 12162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.358e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -1.171e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

QD
type: SiteQuality
SIO_000300: 1.648e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.43388e5

MQRankSum
type: SiteQuality
SIO_000300: -2.388e0

GenotypeDepth
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
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variant carriers: 126

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1171
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5900
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 5716
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 156
bin: 8.25e1
variant carriers: 5

Latino
type: Population
allele count: 7
allele frequency: 9.116957541026309e-4
allele num: 7678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5186
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.491017964071856e-3
allele num: 668
num of homozygotes: 0

South Asian
type: Population
allele count: 67
allele frequency: 5.559243279123797e-3
allele num: 12052
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.690341673392521e-4
allele num: 7434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 1.076308043755217e-3
allele num: 45526
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.30435e5

VQSLOD
type: SiteQuality
SIO_000300: 4.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

GenotypeDepth
all individuals: 199
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variant carriers: 0

GenotypeQuality
all individuals: 622
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variant carriers: 0

GenotypeQuality
all individuals: 256
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2801
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GenotypeQuality
all individuals: 5773
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variant carriers: 0

GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 1110
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 240
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5634
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GenotypeQuality
all individuals: 516
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.960015680125441e-4
allele num: 5102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6826
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

VQSLOD
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SIO_000300: 2.68e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 7.75869e5

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.719361856417694e-4
allele num: 11032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4830
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40550
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.33e-2

VQSLOD
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BaseQRankSum
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FS
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DP
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MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 2.25e-1

ReadPosRankSum
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SIO_000300: -3.86e-1

QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 3.86e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4216
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.779359430604982e-3
allele num: 562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4506
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.7e-2

MQRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.917177914110429e-4
allele num: 5216
num of homozygotes: 0

Other
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num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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FS
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SIO_000300: 0.0e0

MQ
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SIO_000300: 5.833e1

ReadPosRankSum
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SIO_000300: 6.63e-1

VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30950
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 5554
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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ClippingRankSum
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QD
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MQRankSum
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DP
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FS
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4228
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.110370863868532e-4
allele num: 9006
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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MQRankSum
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SIO_000300: 4.67e-1

QD
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ClippingRankSum
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SIO_000300: 1.23e0

MQ
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SIO_000300: 6.213e1

ReadPosRankSum
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BaseQRankSum
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SIO_000300: 1.81e0

InbreedingCoeff
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SIO_000300: -1.98e-2

FS
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SIO_000300: 0.0e0

VQSLOD
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DP
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SIO_000300: 7.14367e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.77963125548727e-5
allele num: 11390
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

VQSLOD
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SIO_000300: -1.474e0

BaseQRankSum
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SIO_000300: -3.223e0

DP
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SIO_000300: 2.087168e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.348e1

MQ
type: SiteQuality
SIO_000300: 5.766e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503849855630414e-5
allele num: 66496
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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Latino
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Other
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South Asian
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BaseQRankSum
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SIO_000300: 2.34e-1

VQSLOD
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DP
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ReadPosRankSum
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FS
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
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allele num: 16496
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East Asian
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African
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Latino
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MQ
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SIO_000300: 5.875e1

BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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East Asian
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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DP
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 23
allele frequency: 2.6583448913546e-3
allele num: 8652
num of homozygotes: 0

South Asian
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Other
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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allele num: 6614
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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MQ
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66710
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VQSLOD
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FS
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BaseQRankSum
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SIO_000300: -3.799e0

DP
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SIO_000300: 2.13081e6

QD
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ReadPosRankSum
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SIO_000300: 2.38e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e-1

MQ
type: SiteQuality
SIO_000300: 5.831e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.99592277251469e-5
allele num: 66712
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
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MQRankSum
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DP
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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African
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Latino
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East Asian
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.995024129972123e-5
allele num: 66722
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

MQRankSum
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QD
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.995024129972123e-5
allele num: 66722
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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Latino
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Other
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European (Finnish)
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ClippingRankSum
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DP
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66722
num of homozygotes: 0

South Asian
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Other
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African
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European (Finnish)
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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South Asian
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Other
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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Latino
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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DP
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MQ
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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Other
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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Other
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African
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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Other
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South Asian
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FS
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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Other
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South Asian
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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QD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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East Asian
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African
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European (Non-Finnish)
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South Asian
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FS
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BaseQRankSum
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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MQRankSum
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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European (Non-Finnish)
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East Asian
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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MQ
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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MQ
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QD
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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Latino
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East Asian
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European (Finnish)
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FS
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 2.380482e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.048e0

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5198
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.351e0

DP
type: SiteQuality
SIO_000300: 2.380636e6

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.22e1

MQ
type: SiteQuality
SIO_000300: 5.964e1