3-124906185-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906185
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906185
    reference: chr 3
allele count: 9
allele frequency: 7.503376519433746e-5
allele num: 119946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.373G>A
  hgvsp: ENSP00000404243.2:p.Gly125Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.286G>A
  hgvsp: ENSP00000377112.4:p.Gly96Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.239G>A
  hgvsp: ENSP00000419424.1:p.Gly81Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.286G>A
  hgvsp: ENSP00000418783.1:p.Gly96Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-456G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.164G>A
  hgvsp: ENSP00000420197.1:p.Arg55Gln
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.190G>A
  hgvsp: ENSP00000418636.1:p.Gly64Arg
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29704
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly96Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-124906186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906186
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906186
    reference: chr 3
allele count: 6
allele frequency: 5.002334422730608e-5
allele num: 119944
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.285C>T
  hgvsp: ENST00000393469.4:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.285C>T
  hgvsp: ENST00000469902.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-457C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.163C>T
  hgvsp: ENSP00000420197.1:p.Arg55Trp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.238C>T
  hgvsp: ENST00000473262.1:c.238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.189C>T
  hgvsp: ENST00000462437.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.372C>T
  hgvsp: ENST00000423114.2:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg55Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

3-124906186-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906186
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906186
    reference: chr 3
allele count: 1
allele frequency: 8.337224037884346e-6
allele num: 119944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.285C>G
  hgvsp: ENST00000469902.1:c.285C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.189C>G
  hgvsp: ENST00000462437.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.163C>G
  hgvsp: ENSP00000420197.1:p.Arg55Gly
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.285C>G
  hgvsp: ENST00000393469.4:c.285C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.238C>G
  hgvsp: ENST00000473262.1:c.238C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-457C>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.372C>G
  hgvsp: ENST00000423114.2:c.372C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8104
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg55Gly
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

3-124906189-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906189
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906189
    reference: chr 3
allele count: 7
allele frequency: 5.837322170149602e-5
allele num: 119918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.186C>T
  hgvsp: ENST00000462437.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.235C>T
  hgvsp: ENST00000473262.1:c.235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-460C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.369C>T
  hgvsp: ENST00000423114.2:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.282C>T
  hgvsp: ENST00000469902.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.160C>T
  hgvsp: ENSP00000420197.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.282C>T
  hgvsp: ENST00000393469.4:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18756
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 8106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg54Cys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

3-124906204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906204
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906204
    reference: chr 3
allele count: 2
allele frequency: 1.670285618840822e-5
allele num: 119740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.171G>A
  hgvsp: ENST00000462437.1:c.171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.267G>A
  hgvsp: ENST00000469902.1:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.145G>A
  hgvsp: ENSP00000420197.1:p.Ala49Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-475G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.220G>A
  hgvsp: ENST00000473262.1:c.220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.354G>A
  hgvsp: ENST00000423114.2:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.267G>A
  hgvsp: ENST00000393469.4:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29695
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8077
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala49Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

3-124906207-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906207
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906207
    reference: chr 3
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.142G>C
  hgvsp: ENSP00000420197.1:p.Gly48Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.351G>C
  hgvsp: ENST00000423114.2:c.351G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.217G>C
  hgvsp: ENST00000473262.1:c.217G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.264G>C
  hgvsp: ENST00000469902.1:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.264G>C
  hgvsp: ENST00000393469.4:c.264G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-478G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.168G>C
  hgvsp: ENST00000462437.1:c.168G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8055
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly48Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-124906207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906207
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906207
    reference: chr 3
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.217G>A
  hgvsp: ENST00000473262.1:c.217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.264G>A
  hgvsp: ENST00000393469.4:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.142G>A
  hgvsp: ENSP00000420197.1:p.Gly48Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-478G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.168G>A
  hgvsp: ENST00000462437.1:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.351G>A
  hgvsp: ENST00000423114.2:c.351G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.264G>A
  hgvsp: ENST00000469902.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly48Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

3-124906208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906208
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906208
    reference: chr 3
allele count: 5
allele frequency: 4.177249030878225e-5
allele num: 119696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.167C>T
  hgvsp: ENSP00000418636.1:p.Thr56Met
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-479C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.263C>T
  hgvsp: ENSP00000377112.4:p.Thr88Met
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.141C>T
  hgvsp: ENST00000479826.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.350C>T
  hgvsp: ENSP00000404243.2:p.Thr117Met
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.263C>T
  hgvsp: ENSP00000418783.1:p.Thr88Met
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.216C>T
  hgvsp: ENSP00000419424.1:p.Thr73Met
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr88Met
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

3-124906212-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906212
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906212
    reference: chr 3
allele count: 2
allele frequency: 1.671597880413888e-5
allele num: 119646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.259G>C
  hgvsp: ENSP00000418783.1:p.Val87Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.137G>C
  hgvsp: ENSP00000420197.1:p.Arg46Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.212G>C
  hgvsp: ENSP00000419424.1:p.Val72Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-483G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.163G>C
  hgvsp: ENSP00000418636.1:p.Val55Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.259G>C
  hgvsp: ENSP00000377112.4:p.Val87Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.346G>C
  hgvsp: ENSP00000404243.2:p.Val116Leu
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val87Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

3-124906212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906212
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906212
    reference: chr 3
allele count: 4
allele frequency: 3.343195760827775e-5
allele num: 119646
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.259G>A
  hgvsp: ENSP00000377112.4:p.Val87Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.346G>A
  hgvsp: ENSP00000404243.2:p.Val116Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.163G>A
  hgvsp: ENSP00000418636.1:p.Val55Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-483G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.259G>A
  hgvsp: ENSP00000418783.1:p.Val87Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.212G>A
  hgvsp: ENSP00000419424.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.137G>A
  hgvsp: ENSP00000420197.1:p.Arg46His
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val87Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

3-124906213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906213
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906213
    reference: chr 3
allele count: 5
allele frequency: 4.179274143666728e-5
allele num: 119638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-484C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.136C>T
  hgvsp: ENSP00000420197.1:p.Arg46Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.345C>T
  hgvsp: ENST00000423114.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.211C>T
  hgvsp: ENST00000473262.1:c.211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.258C>T
  hgvsp: ENST00000469902.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.162C>T
  hgvsp: ENST00000462437.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.258C>T
  hgvsp: ENST00000393469.4:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8051
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg46Cys
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

3-124906230-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906230
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906230
    reference: chr 3
allele count: 3
allele frequency: 2.520711849026165e-5
allele num: 119014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.119G>A
  hgvsp: ENSP00000420197.1:p.Arg40His
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.328G>A
  hgvsp: ENSP00000404243.2:p.Val110Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.145G>A
  hgvsp: ENSP00000418636.1:p.Val49Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.241G>A
  hgvsp: ENSP00000418783.1:p.Val81Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.194G>A
  hgvsp: ENSP00000419424.1:p.Val66Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.241G>A
  hgvsp: ENSP00000377112.4:p.Val81Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-501G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29417
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val81Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

3-124906231-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906231
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906231
    reference: chr 3
allele count: 1
allele frequency: 8.403361344537815e-6
allele num: 119000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.240C>T
  hgvsp: ENST00000469902.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.193C>T
  hgvsp: ENST00000473262.1:c.193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-502C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.327C>T
  hgvsp: ENST00000423114.2:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.240C>T
  hgvsp: ENST00000393469.4:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.118C>T
  hgvsp: ENSP00000420197.1:p.Arg40Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.144C>T
  hgvsp: ENST00000462437.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29420
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg40Cys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-124906235-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906235
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906235
    reference: chr 3
allele count: 63
allele frequency: 5.304637769020915e-4
allele num: 118764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.114C>T
  hgvsp: ENST00000479826.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.236C>T
  hgvsp: ENSP00000377112.4:p.Ser79Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.140C>T
  hgvsp: ENSP00000418636.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.323C>T
  hgvsp: ENSP00000404243.2:p.Ser108Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-506C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.189C>T
  hgvsp: ENSP00000419424.1:p.Ser64Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.236C>T
  hgvsp: ENSP00000418783.1:p.Ser79Phe
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29304
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18443
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7761
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser79Phe
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

3-124906239-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906239
    reference: chr 3
allele count: 1
allele frequency: 8.440813019110001e-6
allele num: 118472
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.185G>C
  hgvsp: ENSP00000419424.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.232G>C
  hgvsp: ENSP00000418783.1:p.Val78Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.136G>C
  hgvsp: ENSP00000418636.1:p.Val46Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.319G>C
  hgvsp: ENSP00000404243.2:p.Val107Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.232G>C
  hgvsp: ENSP00000377112.4:p.Val78Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.110G>C
  hgvsp: ENSP00000420197.1:p.Gly37Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-510G>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29126
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val78Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-124906248-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906248
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906248
    reference: chr 3
allele count: 1
allele frequency: 8.537522410996328e-6
allele num: 117130
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.223A>G
  hgvsp: ENSP00000377112.4:p.Met75Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.310A>G
  hgvsp: ENSP00000404243.2:p.Met104Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-519A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.223A>G
  hgvsp: ENSP00000418783.1:p.Met75Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.176A>G
  hgvsp: ENSP00000419424.1:p.Met60Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.127A>G
  hgvsp: ENSP00000418636.1:p.Met43Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.101A>G
  hgvsp: ENSP00000420197.1:p.His34Arg
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met75Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

3-124906256-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906256
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906256
    reference: chr 3
allele count: 1
allele frequency: 8.712471031033823e-6
allele num: 114778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.119T>C
  hgvsp: ENSP00000418636.1:p.Leu40Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-527T>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.93T>C
  hgvsp: ENST00000479826.1:c.93T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.215T>C
  hgvsp: ENSP00000418783.1:p.Leu72Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.215T>C
  hgvsp: ENSP00000377112.4:p.Leu72Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.302T>C
  hgvsp: ENSP00000404243.2:p.Leu101Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.168T>C
  hgvsp: ENSP00000419424.1:p.Leu57Pro
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5453
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6985
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu72Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

3-124906259-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906259
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906259
    reference: chr 3
allele count: 2
allele frequency: 1.761990344292913e-5
allele num: 113508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.90T>C
  hgvsp: ENST00000479826.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.212T>C
  hgvsp: ENSP00000418783.1:p.Val71Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.212T>C
  hgvsp: ENSP00000377112.4:p.Val71Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.299T>C
  hgvsp: ENSP00000404243.2:p.Val100Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.165T>C
  hgvsp: ENSP00000419424.1:p.Val56Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.116T>C
  hgvsp: ENSP00000418636.1:p.Val39Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-530T>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25835
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val71Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-124906260-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906260
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906260
    reference: chr 3
allele count: 3
allele frequency: 2.650083035935126e-5
allele num: 113204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.211G>T
  hgvsp: ENSP00000418783.1:p.Val71Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.298G>T
  hgvsp: ENSP00000404243.2:p.Val100Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.211G>T
  hgvsp: ENSP00000377112.4:p.Val71Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.115G>T
  hgvsp: ENSP00000418636.1:p.Val39Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.164G>T
  hgvsp: ENSP00000419424.1:p.Val56Leu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.89G>T
  hgvsp: ENSP00000420197.1:p.Ser30Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-531G>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25528
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val71Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-124906262-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906262
    reference: chr 3
allele count: 2
allele frequency: 1.799208348326736e-5
allele num: 111160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.87G>T
  hgvsp: ENSP00000420197.1:p.Arg29Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.113G>T
  hgvsp: ENSP00000418636.1:p.Gly38Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-533G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.209G>T
  hgvsp: ENSP00000418783.1:p.Gly70Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.296G>T
  hgvsp: ENSP00000404243.2:p.Gly99Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.162G>T
  hgvsp: ENSP00000419424.1:p.Gly55Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.209G>T
  hgvsp: ENSP00000377112.4:p.Gly70Val
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6019
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly70Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

3-124906262-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906262
    reference: chr 3
allele count: 1
allele frequency: 8.996041741633682e-6
allele num: 111160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-533G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.209G>C
  hgvsp: ENSP00000377112.4:p.Gly70Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.162G>C
  hgvsp: ENSP00000419424.1:p.Gly55Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.296G>C
  hgvsp: ENSP00000404243.2:p.Gly99Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.209G>C
  hgvsp: ENSP00000418783.1:p.Gly70Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.87G>C
  hgvsp: ENSP00000420197.1:p.Arg29Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.113G>C
  hgvsp: ENSP00000418636.1:p.Gly38Ala
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6019
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly70Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

3-124906266-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906266
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906266
    reference: chr 3
allele count: 2
allele frequency: 1.801217623113225e-5
allele num: 111036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.158A>G
  hgvsp: ENSP00000419424.1:p.Thr54Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.109A>G
  hgvsp: ENSP00000418636.1:p.Thr37Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-537A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.205A>G
  hgvsp: ENSP00000418783.1:p.Thr69Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.83A>G
  hgvsp: ENSP00000420197.1:p.His28Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.292A>G
  hgvsp: ENSP00000404243.2:p.Thr98Ala
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.205A>G
  hgvsp: ENSP00000377112.4:p.Thr69Ala
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23489
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36119
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr69Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-124906270-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906270
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906270
    reference: chr 3
allele count: 1
allele frequency: 9.146118387356406e-6
allele num: 109336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-541A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.201A>G
  hgvsp: ENST00000469902.1:c.201A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.201A>G
  hgvsp: ENST00000393469.4:c.201A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.154A>G
  hgvsp: ENST00000473262.1:c.154A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.79A>G
  hgvsp: ENSP00000420197.1:p.Lys27Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.288A>G
  hgvsp: ENST00000423114.2:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.105A>G
  hgvsp: ENST00000462437.1:c.105A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21914
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11550
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys27Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/3-124906271-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906271
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906271
    reference: chr 3
allele count: 1
allele frequency: 9.203357384773966e-6
allele num: 108656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.78G>T
  hgvsp: ENST00000479826.1:c.78G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.153G>T
  hgvsp: ENSP00000419424.1:p.Gly52Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.104G>T
  hgvsp: ENSP00000418636.1:p.Gly35Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.287G>T
  hgvsp: ENSP00000404243.2:p.Gly96Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.200G>T
  hgvsp: ENSP00000418783.1:p.Gly67Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.200G>T
  hgvsp: ENSP00000377112.4:p.Gly67Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-542G>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly67Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/3-124906276-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906276
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906276
    reference: chr 3
allele count: 1
allele frequency: 9.452689290103035e-6
allele num: 105790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-4G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-4G>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15806
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
hgvs: c.199-4G>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

3-124906286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906286
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906286
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 99524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-14C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-14C>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9468
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23585
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3654
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

3-124906293-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906293
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906293
    reference: chr 3
allele count: 10
allele frequency: 1.027432446316655e-4
allele num: 97330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-21C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-21C>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9630
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10193
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23280
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-124906303-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906303
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906303
    reference: chr 3
allele count: 247
allele frequency: 2.711068182815999e-3
allele num: 91108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-31T>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-31T>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 1.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25617
  bin: 1.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11959
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5372
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26362
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 2
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-124906303-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906303
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906303
    reference: chr 3
allele count: 23
allele frequency: 2.524476445537165e-4
allele num: 91108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-31T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-31T>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11959
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25617
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26362
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

3-124906309-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906309
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906309
    reference: chr 3
allele count: 1
allele frequency: 1.172277970552377e-5
allele num: 85304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-37A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-37A>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6280
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

3-124906317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906317
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906317
    reference: chr 3
allele count: 1
allele frequency: 1.331097090221761e-5
allele num: 75126
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-45G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-45G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20398
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5529
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6817
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3994
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-124906318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906318
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906318
    reference: chr 3
allele count: 3
allele frequency: 4.188891060906476e-5
allele num: 71618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-46G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-46G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4284
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6809
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

3-124906320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906320
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906320
    reference: chr 3
allele count: 1
allele frequency: 1.395556547951323e-5
allele num: 71656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-48G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6034
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6762
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-124906321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124906321
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124906321
    reference: chr 3
allele count: 4
allele frequency: 5.609468783306221e-5
allele num: 71308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.77-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.152-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.103-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-543-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.199-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.199-49C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.286-49C>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19399
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8428
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-124909171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909171
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909171
    reference: chr 3
allele count: 4
allele frequency: 3.377864851627286e-5
allele num: 118418
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+48G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+48G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

3-124909172-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909172
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909172
    reference: chr 3
allele count: 1
allele frequency: 8.442523301364311e-6
allele num: 118448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+47G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+47G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49067
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

3-124909173-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909173
    reference: chr 3
allele count: 1
allele frequency: 8.436825053995681e-6
allele num: 118528
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+46A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+46A>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

3-124909176-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909176
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909176
    reference: chr 3
allele count: 1
allele frequency: 8.439673215853081e-6
allele num: 118488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+43G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+43G>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

3-124909178-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909178
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909178
    reference: chr 3
allele count: 10922
allele frequency: 9.20615654343465e-2
allele num: 118638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+41A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+41A>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.75e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 9.25e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 7.75e1
  variant carriers: 865
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 743
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.75e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 5.25e1
  variant carriers: 599
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 7.25e1
  variant carriers: 987
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 6.75e1
  variant carriers: 974
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 4.25e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 6.25e1
  variant carriers: 875
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 3.25e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 4.75e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 5832
  bin: 9.75e1
  variant carriers: 1545
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 8.25e1
  variant carriers: 721
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 8.75e1
  variant carriers: 585
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 566
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/3-124909183-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909183
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909183
    reference: chr 3
allele count: 1
allele frequency: 8.41864224137931e-6
allele num: 118784
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+36G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+36G>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48877
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-124909184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909184
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909184
    reference: chr 3
allele count: 70
allele frequency: 5.892057506481263e-4
allele num: 118804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+35G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+35G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

3-124909184-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909184
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909184
    reference: chr 3
allele count: 6
allele frequency: 5.050335005555368e-5
allele num: 118804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+35G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+35G>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-124909185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909185
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909185
    reference: chr 3
allele count: 5
allele frequency: 4.204648659558008e-5
allele num: 118916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+34C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+34C>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48880
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/3-124909204-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909204
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909204
    reference: chr 3
allele count: 1
allele frequency: 8.341396683460679e-6
allele num: 119884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+15G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+15G>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48888
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

3-124909204-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909204
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909204
    reference: chr 3
allele count: 1
allele frequency: 8.341396683460679e-6
allele num: 119884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+15G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+15G>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48888
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

3-124909207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909207
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909207
    reference: chr 3
allele count: 3
allele frequency: 2.500625156289072e-5
allele num: 119970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+12G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+12G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

3-124909208-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909208
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909208
    reference: chr 3
allele count: 2
allele frequency: 1.666222340709144e-5
allele num: 120032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+11A>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+11A>T
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

3-124909211-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909211
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909211
    reference: chr 3
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+8C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+8C>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: c.198+8C>A
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

3-124909214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909214
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909214
    reference: chr 3
allele count: 1
allele frequency: 8.318637074501714e-6
allele num: 120212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-544+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.76+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.102+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.151+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.198+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.198+5G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.285+5G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
hgvs: c.198+5G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

3-124909222-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909222
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909222
    reference: chr 3
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-547G>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.73G>C
  hgvsp: ENSP00000420197.1:p.Gly25Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.195G>C
  hgvsp: ENST00000469902.1:c.195G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.99G>C
  hgvsp: ENST00000462437.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.282G>C
  hgvsp: ENST00000423114.2:c.282G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.195G>C
  hgvsp: ENST00000393469.4:c.195G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.148G>C
  hgvsp: ENST00000473262.1:c.148G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6458
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly25Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-124909229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909229
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909229
    reference: chr 3
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-554G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.188G>A
  hgvsp: ENSP00000377112.4:p.Gly63Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.188G>A
  hgvsp: ENSP00000418783.1:p.Gly63Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.141G>A
  hgvsp: ENSP00000419424.1:p.Gly48Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.275G>A
  hgvsp: ENSP00000404243.2:p.Gly92Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.92G>A
  hgvsp: ENSP00000418636.1:p.Gly31Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.66G>A
  hgvsp: ENSP00000420197.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48893
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6730
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp22Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-124909235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909235
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909235
    reference: chr 3
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.182G>A
  hgvsp: ENSP00000377112.4:p.Arg61Lys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.182G>A
  hgvsp: ENSP00000418783.1:p.Arg61Lys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.60G>A
  hgvsp: ENST00000479826.1:c.60G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-560G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.269G>A
  hgvsp: ENSP00000404243.2:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.86G>A
  hgvsp: ENSP00000418636.1:p.Arg29Lys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.135G>A
  hgvsp: ENSP00000419424.1:p.Arg46Lys
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg61Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-124909240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909240
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909240
    reference: chr 3
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.264C>T
  hgvsp: ENST00000423114.2:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.177C>T
  hgvsp: ENST00000469902.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-565C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.177C>T
  hgvsp: ENST00000393469.4:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.81C>T
  hgvsp: ENST00000462437.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.55C>T
  hgvsp: ENSP00000420197.1:p.Pro19Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.130C>T
  hgvsp: ENST00000473262.1:c.130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro19Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

3-124909250-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909250
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909250
    reference: chr 3
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.45T>A
  hgvsp: ENST00000479826.1:c.45T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.167T>A
  hgvsp: ENSP00000418783.1:p.Val56Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.254T>A
  hgvsp: ENSP00000404243.2:p.Val85Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.71T>A
  hgvsp: ENSP00000418636.1:p.Val24Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.167T>A
  hgvsp: ENSP00000377112.4:p.Val56Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.120T>A
  hgvsp: ENSP00000419424.1:p.Val41Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-575T>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val56Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-124909251-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909251
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909251
    reference: chr 3
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.119G>T
  hgvsp: ENSP00000419424.1:p.Val41Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-576G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.253G>T
  hgvsp: ENSP00000404243.2:p.Val85Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.70G>T
  hgvsp: ENSP00000418636.1:p.Val24Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.166G>T
  hgvsp: ENSP00000418783.1:p.Val56Phe
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.44G>T
  hgvsp: ENSP00000420197.1:p.Gly15Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.166G>T
  hgvsp: ENSP00000377112.4:p.Val56Phe
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7012
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val56Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-124909255-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909255
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909255
    reference: chr 3
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.162T>C
  hgvsp: ENST00000393469.4:c.162T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.162T>C
  hgvsp: ENST00000469902.1:c.162T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-580T>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.115T>C
  hgvsp: ENST00000473262.1:c.115T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.40T>C
  hgvsp: ENSP00000420197.1:p.Trp14Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.66T>C
  hgvsp: ENST00000462437.1:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.249T>C
  hgvsp: ENST00000423114.2:c.249T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp14Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

3-124909261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909261
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909261
    reference: chr 3
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.156C>T
  hgvsp: ENST00000469902.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.243C>T
  hgvsp: ENST00000423114.2:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.109C>T
  hgvsp: ENST00000473262.1:c.109C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-586C>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.34C>T
  hgvsp: ENSP00000420197.1:p.His12Tyr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.156C>T
  hgvsp: ENST00000393469.4:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.60C>T
  hgvsp: ENST00000462437.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7028
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His12Tyr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-124909262-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909262
    reference: chr 3
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.242A>G
  hgvsp: ENSP00000404243.2:p.Asn81Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.155A>G
  hgvsp: ENSP00000418783.1:p.Asn52Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.155A>G
  hgvsp: ENSP00000377112.4:p.Asn52Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.108A>G
  hgvsp: ENSP00000419424.1:p.Asn37Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.33A>G
  hgvsp: ENST00000479826.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.59A>G
  hgvsp: ENSP00000418636.1:p.Asn20Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-587A>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn52Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-124909262-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909262
    reference: chr 3
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-587A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.33A>C
  hgvsp: ENSP00000420197.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.155A>C
  hgvsp: ENSP00000377112.4:p.Asn52Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.242A>C
  hgvsp: ENSP00000404243.2:p.Asn81Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.59A>C
  hgvsp: ENSP00000418636.1:p.Asn20Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.155A>C
  hgvsp: ENSP00000418783.1:p.Asn52Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.108A>C
  hgvsp: ENSP00000419424.1:p.Asn37Thr
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48896
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn52Thr
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

3-124909267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909267
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909267
    reference: chr 3
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.150G>A
  hgvsp: ENSP00000377112.4:p.Met50Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.103G>A
  hgvsp: ENSP00000419424.1:p.Met35Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.150G>A
  hgvsp: ENSP00000418783.1:p.Met50Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.28G>A
  hgvsp: ENSP00000420197.1:p.Asp10Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.54G>A
  hgvsp: ENSP00000418636.1:p.Met18Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-592G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.237G>A
  hgvsp: ENSP00000404243.2:p.Met79Ile
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48895
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met50Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

3-124909268-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909268
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909268
    reference: chr 3
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.53T>C
  hgvsp: ENSP00000418636.1:p.Met18Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.102T>C
  hgvsp: ENSP00000419424.1:p.Met35Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.27T>C
  hgvsp: ENST00000479826.1:c.27T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.149T>C
  hgvsp: ENSP00000418783.1:p.Met50Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.236T>C
  hgvsp: ENSP00000404243.2:p.Met79Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.149T>C
  hgvsp: ENSP00000377112.4:p.Met50Thr
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-593T>C
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met50Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

3-124909272-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909272
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909272
    reference: chr 3
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.23T>C
  hgvsp: ENSP00000420197.1:p.Leu8Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.98T>C
  hgvsp: ENSP00000419424.1:p.Cys34Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.49T>C
  hgvsp: ENSP00000418636.1:p.Cys17Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.232T>C
  hgvsp: ENSP00000404243.2:p.Cys78Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-597T>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.145T>C
  hgvsp: ENSP00000418783.1:p.Cys49Arg
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.145T>C
  hgvsp: ENSP00000377112.4:p.Cys49Arg
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48895
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys49Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

3-124909276-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909276
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909276
    reference: chr 3
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.141A>G
  hgvsp: ENST00000393469.4:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.19A>G
  hgvsp: ENSP00000420197.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-601A>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.228A>G
  hgvsp: ENST00000423114.2:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.45A>G
  hgvsp: ENST00000462437.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.94A>G
  hgvsp: ENST00000473262.1:c.94A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.141A>G
  hgvsp: ENST00000469902.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48896
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile7Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

3-124909281-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909281
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909281
    reference: chr 3
allele count: 2
allele frequency: 1.656506758547575e-5
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.136T>A
  hgvsp: ENSP00000377112.4:p.Phe46Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.223T>A
  hgvsp: ENSP00000404243.2:p.Phe75Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.14T>A
  hgvsp: ENSP00000420197.1:p.Val5Asp
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.40T>A
  hgvsp: ENSP00000418636.1:p.Phe14Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.136T>A
  hgvsp: ENSP00000418783.1:p.Phe46Ile
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-606T>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.89T>A
  hgvsp: ENSP00000419424.1:p.Phe31Ile
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe46Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/3-124909288-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909288
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909288
    reference: chr 3
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.216T>G
  hgvsp: ENSP00000404243.2:p.Asp72Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.129T>G
  hgvsp: ENSP00000377112.4:p.Asp43Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.129T>G
  hgvsp: ENSP00000418783.1:p.Asp43Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.7T>G
  hgvsp: ENSP00000420197.1:p.Trp3Gly
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.82T>G
  hgvsp: ENSP00000419424.1:p.Asp28Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.33T>G
  hgvsp: ENSP00000418636.1:p.Asp11Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-613T>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp43Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

3-124909290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909290
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909290
    reference: chr 3
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.5G>A
  hgvsp: ENSP00000420197.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-615G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.127G>A
  hgvsp: ENSP00000377112.4:p.Asp43Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.214G>A
  hgvsp: ENSP00000404243.2:p.Asp72Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.127G>A
  hgvsp: ENSP00000418783.1:p.Asp43Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.80G>A
  hgvsp: ENSP00000419424.1:p.Asp28Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.31G>A
  hgvsp: ENSP00000418636.1:p.Asp11Asn
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp43Asn
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

http://identifiers.org/exac.variant/3-124909291-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909291
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909291
    reference: chr 3
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.30G>T
  hgvsp: ENSP00000418636.1:p.Trp10Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000420197
  ensembl transcript: ENST00000479826
  gene symbol: SLC12A8
  hgvsc: ENST00000479826.1:c.4G>T
  hgvsp: ENSP00000420197.1:p.Gly2Ter
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.213G>T
  hgvsp: ENSP00000404243.2:p.Trp71Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.79G>T
  hgvsp: ENSP00000419424.1:p.Trp27Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.126G>T
  hgvsp: ENSP00000418783.1:p.Trp42Cys
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-616G>T
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.126G>T
  hgvsp: ENSP00000377112.4:p.Trp42Cys
  variant of: http://identifiers.org/hgnc/15595
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7043
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly2Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

3-124909295-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909295
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909295
    reference: chr 3
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.209C>G
  hgvsp: ENSP00000404243.2:p.Thr70Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-620C>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.75C>G
  hgvsp: ENSP00000419424.1:p.Thr26Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.122C>G
  hgvsp: ENSP00000377112.4:p.Thr41Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.26C>G
  hgvsp: ENSP00000418636.1:p.Thr9Ser
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.122C>G
  hgvsp: ENSP00000418783.1:p.Thr41Ser
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7033
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr41Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-124909326-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909326
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909326
    reference: chr 3
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.91C>G
  hgvsp: ENSP00000418783.1:p.Leu31Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-651C>G
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.91C>G
  hgvsp: ENSP00000377112.4:p.Leu31Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.44C>G
  hgvsp: ENSP00000419424.1:p.Leu16Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.178C>G
  hgvsp: ENSP00000404243.2:p.Leu60Val
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.-6C>G
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6943
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu31Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

3-124909327-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909327
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909327
    reference: chr 3
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.177G>A
  hgvsp: ENST00000423114.2:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.90G>A
  hgvsp: ENST00000469902.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.43G>A
  hgvsp: ENST00000473262.1:c.43G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.90G>A
  hgvsp: ENST00000393469.4:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-652G>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln30Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-124909328-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909328
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909328
    reference: chr 3
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.89A>C
  hgvsp: ENSP00000418783.1:p.Gln30Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.89A>C
  hgvsp: ENSP00000377112.4:p.Gln30Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.42A>C
  hgvsp: ENSP00000419424.1:p.Gln15Pro
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.-8A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-653A>C
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.176A>C
  hgvsp: ENSP00000404243.2:p.Gln59Pro
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln30Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

3-124909331-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124909331
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124909331
    reference: chr 3
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000404243
  ensembl transcript: ENST00000423114
  gene symbol: SLC12A8
  hgvsc: ENST00000423114.2:c.173C>A
  hgvsp: ENSP00000404243.2:p.Thr58Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418783
  ensembl transcript: ENST00000469902
  gene symbol: SLC12A8
  hgvsc: ENST00000469902.1:c.86C>A
  hgvsp: ENSP00000418783.1:p.Thr29Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000323632
  ensembl transcript: ENST00000314584
  gene symbol: SLC12A8
  hgvsc: ENST00000314584.7:c.-656C>A
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000419424
  ensembl transcript: ENST00000473262
  gene symbol: SLC12A8
  hgvsc: ENST00000473262.1:c.39C>A
  hgvsp: ENSP00000419424.1:p.Thr14Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000377112
  ensembl transcript: ENST00000393469
  gene symbol: SLC12A8
  hgvsc: ENST00000393469.4:c.86C>A
  hgvsp: ENSP00000377112.4:p.Thr29Asn
  variant of: http://identifiers.org/hgnc/15595
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000221955
  ensembl protein: ENSP00000418636
  ensembl transcript: ENST00000462437
  gene symbol: SLC12A8
  hgvsc: ENST00000462437.1:c.-11C>A
  variant of: http://identifiers.org/hgnc/15595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr29Asn
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45071
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8098
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.599653379549393e-4
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.528533140602885e-5
allele num: 66414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.342e-1

DP
type: SiteQuality
SIO_000300: 1.616734e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

QD
type: SiteQuality
SIO_000300: 2.428e1

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeQuality
all individuals: 8104
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817520901490367e-4
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505706628120577e-5
allele num: 66414
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

FS
type: SiteQuality
SIO_000300: 1.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

DP
type: SiteQuality
SIO_000300: 1.61638e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
all individuals: 212
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.029018316526034e-4
allele num: 9718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

DP
type: SiteQuality
SIO_000300: 1.61638e6

QD
type: SiteQuality
SIO_000300: 1.288e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

FS
type: SiteQuality
SIO_000300: 1.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 702
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.028383381324558e-4
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.529666887536896e-5
allele num: 66404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.617e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.238e1

FS
type: SiteQuality
SIO_000300: 1.738e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

DP
type: SiteQuality
SIO_000300: 1.616036e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
all individuals: 1703
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.371e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.026e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 6.94e0

DP
type: SiteQuality
SIO_000300: 1.61327e6

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

DP
type: SiteQuality
SIO_000300: 1.61315e6

QD
type: SiteQuality
SIO_000300: 1.001e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
all individuals: 8055
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66310
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

DP
type: SiteQuality
SIO_000300: 1.61315e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45211
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.029442042413012e-4
allele num: 9714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016318281905107e-5
allele num: 66306
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 4.079e0

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.705e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

DP
type: SiteQuality
SIO_000300: 1.612685e6

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45197
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016955288722621e-5
allele num: 66292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.186e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 1.611639e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.472825143254037e-4
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.611639e6

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.182e1

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017046311660884e-5
allele num: 66290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214181641573579e-4
allele num: 16472
num of homozygotes: 1

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.611831e6

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

FS
type: SiteQuality
SIO_000300: 2.024e0

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

GenotypeQuality
all individuals: 1380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7856
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 1598
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variant carriers: 0

GenotypeQuality
all individuals: 44873
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GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 238
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variant carriers: 0

GenotypeQuality
all individuals: 209
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variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.103515625e-5
allele num: 16384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.069e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.600744e6

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
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variant carriers: 0

GenotypeQuality
all individuals: 1379
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 45002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
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variant carriers: 0

GenotypeQuality
all individuals: 184
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variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66042
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.102770657878677e-5
allele num: 16386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.102e0

DP
type: SiteQuality
SIO_000300: 1.600428e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

QD
type: SiteQuality
SIO_000300: 1.133e1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 194
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GenotypeQuality
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variant carriers: 63

GenotypeQuality
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GenotypeQuality
all individuals: 1600
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
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GenotypeQuality
all individuals: 44785
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GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

African
type: Population
allele count: 60
allele frequency: 6.246096189881324e-3
allele num: 9606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033520400424693e-5
allele num: 65930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 1.131e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

DP
type: SiteQuality
SIO_000300: 1.597671e6

QD
type: SiteQuality
SIO_000300: 1.197e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.965e0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 1873
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 197
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GenotypeQuality
all individuals: 552
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044277360066834e-4
allele num: 9576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65766
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.56e-1

DP
type: SiteQuality
SIO_000300: 1.589888e6

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 1367
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.892050506846879e-5
allele num: 11246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

FS
type: SiteQuality
SIO_000300: 7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 1.564186e6

QD
type: SiteQuality
SIO_000300: 7.72e0

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 359
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GenotypeQuality
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GenotypeQuality
all individuals: 1358
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GenotypeQuality
all individuals: 478
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562597662353897e-5
allele num: 63996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10978
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.514334e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.624e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

QD
type: SiteQuality
SIO_000300: 1.475e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.157761778451433e-5
allele num: 63336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.488473e6

FS
type: SiteQuality
SIO_000300: 2.356e0

QD
type: SiteQuality
SIO_000300: 1.22e1

MQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5466
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.298878381350341e-4
allele num: 9094
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 1.47968e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5314
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62142
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10506
num of homozygotes: 0

South Asian
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allele frequency: 1.300390117035111e-4
allele num: 15380
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.396e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

DP
type: SiteQuality
SIO_000300: 1.428645e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62142
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5314
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.501950585175553e-5
allele num: 15380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

DP
type: SiteQuality
SIO_000300: 1.428645e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.396e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.816e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8916
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.22102686336404e-5
allele num: 62092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10490
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8078
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QD
type: SiteQuality
SIO_000300: 1.057e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.42162e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.003e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.634093731616446e-5
allele num: 61196
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8786
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.912e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.643007360672976e-5
allele num: 60864
num of homozygotes: 0

Other
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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East Asian
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Latino
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Other
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allele num: 768
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European (Non-Finnish)
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num of homozygotes: 0

ReadPosRankSum
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MQ
type: SiteQuality
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DP
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

East Asian
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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South Asian
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 9.75e1
variant carriers: 10

East Asian
type: Population
allele count: 9
allele frequency: 1.325869180907484e-3
allele num: 6788
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.138777841233581e-5
allele num: 14008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.364e0

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

FS
type: SiteQuality
SIO_000300: 1.064e0

DP
type: SiteQuality
SIO_000300: 1.030537e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 1391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 9.75e1
variant carriers: 237

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 550
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 9437
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 288
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.937759175289695e-5
allele num: 51606
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.879699248120301e-3
allele num: 7980
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.519756838905775e-3
allele num: 658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3976
num of homozygotes: 0

African
type: Population
allele count: 228
allele frequency: 3.131868131868132e-2
allele num: 7280
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.495438911320473e-4
allele num: 13374
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 1.533e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 9.18221e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 944
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9437
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.719754748018543e-3
allele num: 13374
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

QD
type: SiteQuality
SIO_000300: 1.533e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 9.18221e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6671
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.747133560582585e-5
allele num: 12908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

QD
type: SiteQuality
SIO_000300: 2.084e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.531e0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

DP
type: SiteQuality
SIO_000300: 8.60569e5

GenotypeQuality
all individuals: 187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4627
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18898
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.327421682260392e-5
allele num: 42966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3078
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

QD
type: SiteQuality
SIO_000300: 2.99e0

VQSLOD
type: SiteQuality
SIO_000300: -2.915e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.0918e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

GenotypeQuality
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1772
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.303890539027122e-5
allele num: 41074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11634
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

FS
type: SiteQuality
SIO_000300: 1.127e0

DP
type: SiteQuality
SIO_000300: 8.01618e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeQuality
all individuals: 5223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4014
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.436647173489279e-5
allele num: 41040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

QD
type: SiteQuality
SIO_000300: 1.482e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

DP
type: SiteQuality
SIO_000300: 8.00079e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

GenotypeQuality
all individuals: 5171
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5684
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6701
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11580
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.785714285714286e-4
allele num: 5600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.898599000685804e-5
allele num: 40828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.259376412110258e-4
allele num: 4426
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.98833e5

QD
type: SiteQuality
SIO_000300: 9.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49065
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 469
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022517757291824e-5
allele num: 66170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730403183941858e-4
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.639e0

DP
type: SiteQuality
SIO_000300: 3.691085e6

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.168e0

QD
type: SiteQuality
SIO_000300: 1.47e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

GenotypeQuality
all individuals: 203
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511761504505049e-5
allele num: 66148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.691586e6

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.046e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.892e1

QD
type: SiteQuality
SIO_000300: 2.705e1

VQSLOD
type: SiteQuality
SIO_000300: -2.477e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 91
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49072
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 2.268e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.692255e6

GenotypeQuality
all individuals: 708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49067
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.131e0

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-1

FS
type: SiteQuality
SIO_000300: 1.0955e1

QD
type: SiteQuality
SIO_000300: 1.376e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 3.694172e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

GenotypeQuality
all individuals: 515
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 378
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 390
bin: 8.75e1
variant carriers: 13

GenotypeQuality
all individuals: 50298
bin: 9.75e1
variant carriers: 10272

GenotypeQuality
all individuals: 322
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2668
bin: 6.25e1
variant carriers: 8

East Asian
type: Population
allele count: 998
allele frequency: 1.161005118659842e-1
allele num: 8596
num of homozygotes: 53

Other
type: Population
allele count: 89
allele frequency: 1.015981735159817e-1
allele num: 876
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 5814
allele frequency: 8.775584133309183e-2
allele num: 66252
num of homozygotes: 264

Latino
type: Population
allele count: 1325
allele frequency: 1.147384828541739e-1
allele num: 11548
num of homozygotes: 78

European (Finnish)
type: Population
allele count: 753
allele frequency: 1.138838475499093e-1
allele num: 6612
num of homozygotes: 43

South Asian
type: Population
allele count: 559
allele frequency: 3.730646022423919e-2
allele num: 14984
num of homozygotes: 15

African
type: Population
allele count: 1384
allele frequency: 1.416581371545547e-1
allele num: 9770
num of homozygotes: 106

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

DP
type: SiteQuality
SIO_000300: 3.776911e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

FS
type: SiteQuality
SIO_000300: 7.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.268e0

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 3.772216e6

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.382e0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48880
bin: 9.75e1
variant carriers: 70

GenotypeQuality
all individuals: 576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.02291325695581e-4
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 66
allele frequency: 7.65661252900232e-3
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.528848766643519e-5
allele num: 66242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

DP
type: SiteQuality
SIO_000300: 3.774524e6

QD
type: SiteQuality
SIO_000300: 1.55e1

FS
type: SiteQuality
SIO_000300: 3.706e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 1017
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48880
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.057697533287038e-5
allele num: 66242
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

DP
type: SiteQuality
SIO_000300: 3.774524e6

FS
type: SiteQuality
SIO_000300: 3.706e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

QD
type: SiteQuality
SIO_000300: 1.55e1

GenotypeQuality
all individuals: 518
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4044
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017410458344649e-5
allele num: 66282
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.975763962065332e-4
allele num: 15184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 3.619e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.777701e6

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.022285831118381e-4
allele num: 9782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 5.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

DP
type: SiteQuality
SIO_000300: 3.802403e6

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

QD
type: SiteQuality
SIO_000300: 1.099e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
all individuals: 685
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.287726358148894e-5
allele num: 15904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

DP
type: SiteQuality
SIO_000300: 3.802403e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48892
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022076860179886e-4
allele num: 9784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.251721116535236e-4
allele num: 15978
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.62e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.614e0

InbreedingCoeff
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SIO_000300: 1.17e-2

ReadPosRankSum
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SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 3.804711e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.243756243756244e-5
allele num: 16016
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
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SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.791e0

BaseQRankSum
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DP
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SIO_000300: 3.805073e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9790
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 8.200000000000001e-3

VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

FS
type: SiteQuality
SIO_000300: 9.832000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66566
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African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.188118811881188e-5
allele num: 16160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.058e0

QD
type: SiteQuality
SIO_000300: 1.484e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQ
type: SiteQuality
SIO_000300: 5.691e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.515e0

DP
type: SiteQuality
SIO_000300: 3.809049e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.289e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 84
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 3.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.367e0

QD
type: SiteQuality
SIO_000300: 7.51e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.837e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.167e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

DP
type: SiteQuality
SIO_000300: 3.813237e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9792
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.961e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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South Asian
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66704
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East Asian
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VQSLOD
type: SiteQuality
SIO_000300: 9.61e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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ClippingRankSum
type: SiteQuality
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DP
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MQRankSum
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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DP
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.53e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
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FS
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SIO_000300: 4.446e0

ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.21e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.99e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.92e-1

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 9.1e-3

ClippingRankSum
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SIO_000300: 9.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

DP
type: SiteQuality
SIO_000300: 3.81972e6

QD
type: SiteQuality
SIO_000300: 1.589e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.81972e6

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-3

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.9e-3

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.819657e6

FS
type: SiteQuality
SIO_000300: 3.635e0

MQRankSum
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SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.97e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 7.06e-1

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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FS
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
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allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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FS
type: SiteQuality
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QD
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MQRankSum
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 3.819818e6

VQSLOD
type: SiteQuality
SIO_000300: 1.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.222e0

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

QD
type: SiteQuality
SIO_000300: 1.677e1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.06e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

DP
type: SiteQuality
SIO_000300: 3.819921e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.285e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 9.63e-1

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 2.324e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.945e0

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

DP
type: SiteQuality
SIO_000300: 3.819848e6

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

GenotypeQuality
all individuals: 1423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

DP
type: SiteQuality
SIO_000300: 3.819838e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 1.906e0

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.317e0

VQSLOD
type: SiteQuality
SIO_000300: -5.03e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.605e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 3.818717e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 8.9e0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1405
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.327e1

VQSLOD
type: SiteQuality
SIO_000300: 8.01e-1

FS
type: SiteQuality
SIO_000300: 5.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.03e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 3.818617e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.694e0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.581e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.491e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.239e1

DP
type: SiteQuality
SIO_000300: 3.818591e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1