3-9974909-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974909
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974909
    reference: chr 3
allele count: 1
allele frequency: 1.017977482338091e-5
allele num: 98234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1750G>C
  hgvsp: ENSP00000373323.4:p.Gly584Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2008G>C
  hgvsp: ENSP00000295981.3:p.Gly670Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1756G>C
  hgvsp: ENSP00000396064.1:p.Gly586Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1699G>C
  hgvsp: ENSP00000407894.1:p.Gly567Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2062G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1954G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1795G>C
  hgvsp: ENSP00000384969.3:p.Gly599Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2179G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1488G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1470G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2108G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1178G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1273G>C
  hgvsp: ENSP00000395315.2:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly670Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-9974911-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974911
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974911
    reference: chr 3
allele count: 5
allele frequency: 5.108400253376653e-5
allele num: 97878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1701G>C
  hgvsp: ENST00000455057.1:c.1701G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2010G>C
  hgvsp: ENST00000295981.3:c.2010G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1797G>C
  hgvsp: ENST00000403601.3:c.1797G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2110G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1956G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1180G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1758G>C
  hgvsp: ENST00000413608.1:c.1758G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2181G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1490G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1275G>C
  hgvsp: ENST00000416074.2:c.1275G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2064G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1752G>C
  hgvsp: ENST00000383812.4:c.1752G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1472G>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8642
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18479
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly670Gly
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

3-9974911-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974911
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974911
    reference: chr 3
allele count: 1
allele frequency: 1.021680050675331e-5
allele num: 97878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1752G>T
  hgvsp: ENST00000383812.4:c.1752G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2181G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1701G>T
  hgvsp: ENST00000455057.1:c.1701G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1956G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2010G>T
  hgvsp: ENST00000295981.3:c.2010G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1180G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1797G>T
  hgvsp: ENST00000403601.3:c.1797G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2110G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1758G>T
  hgvsp: ENST00000413608.1:c.1758G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1275G>T
  hgvsp: ENST00000416074.2:c.1275G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2064G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1472G>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1490G>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8642
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly670Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

3-9974914-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974914
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974914
    reference: chr 3
allele count: 1
allele frequency: 1.035925910578875e-5
allele num: 96532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1183C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1800C>T
  hgvsp: ENST00000403601.3:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1755C>T
  hgvsp: ENST00000383812.4:c.1755C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1493C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1959C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1704C>T
  hgvsp: ENST00000455057.1:c.1704C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2067C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2184C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1278C>T
  hgvsp: ENST00000416074.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1761C>T
  hgvsp: ENST00000413608.1:c.1761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2113C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1475C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2013C>T
  hgvsp: ENST00000295981.3:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro671Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

3-9974915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974915
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974915
    reference: chr 3
allele count: 4
allele frequency: 4.144905910635829e-5
allele num: 96504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1756G>A
  hgvsp: ENSP00000373323.4:p.Gly586Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1476G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2068G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2114G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1801G>A
  hgvsp: ENSP00000384969.3:p.Gly601Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1762G>A
  hgvsp: ENSP00000396064.1:p.Gly588Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1960G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1184G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2185G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2014G>A
  hgvsp: ENSP00000295981.3:p.Gly672Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1279G>A
  hgvsp: ENSP00000395315.2:p.Gly427Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1494G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1705G>A
  hgvsp: ENSP00000407894.1:p.Gly569Arg
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16672
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly672Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

3-9974916-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974916
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974916
    reference: chr 3
allele count: 3
allele frequency: 3.103790763118689e-5
allele num: 96656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1961G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1185G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2069G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2015G>C
  hgvsp: ENSP00000295981.3:p.Gly672Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1757G>C
  hgvsp: ENSP00000373323.4:p.Gly586Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1802G>C
  hgvsp: ENSP00000384969.3:p.Gly601Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2115G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1477G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1706G>C
  hgvsp: ENSP00000407894.1:p.Gly569Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1495G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1763G>C
  hgvsp: ENSP00000396064.1:p.Gly588Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2186G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1280G>C
  hgvsp: ENSP00000395315.2:p.Gly427Ala
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13899
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10964
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly672Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

3-9974919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974919
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974919
    reference: chr 3
allele count: 72
allele frequency: 7.716380160329232e-4
allele num: 93308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1964C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1188C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2189C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1709C>T
  hgvsp: ENSP00000407894.1:p.Ala570Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1760C>T
  hgvsp: ENSP00000373323.4:p.Ala587Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2072C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1283C>T
  hgvsp: ENSP00000395315.2:p.Ala428Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1766C>T
  hgvsp: ENSP00000396064.1:p.Ala589Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2018C>T
  hgvsp: ENSP00000295981.3:p.Ala673Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2118C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1805C>T
  hgvsp: ENSP00000384969.3:p.Ala602Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1498C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1480C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 16268
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9713
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8968
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala673Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

3-9974922-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974922
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974922
    reference: chr 3
allele count: 1
allele frequency: 1.069816205575882e-5
allele num: 93474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1763A>G
  hgvsp: ENSP00000373323.4:p.His588Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1967A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1712A>G
  hgvsp: ENSP00000407894.1:p.His571Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1191A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1483A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1286A>G
  hgvsp: ENSP00000395315.2:p.His429Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2021A>G
  hgvsp: ENSP00000295981.3:p.His674Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1769A>G
  hgvsp: ENSP00000396064.1:p.His590Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1501A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2121A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1808A>G
  hgvsp: ENSP00000384969.3:p.His603Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2075A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2192A>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13147
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His674Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

3-9974923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974923
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974923
    reference: chr 3
allele count: 1
allele frequency: 1.071420918422011e-5
allele num: 93334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1809C>T
  hgvsp: ENST00000403601.3:c.1809C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1770C>T
  hgvsp: ENST00000413608.1:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1764C>T
  hgvsp: ENST00000383812.4:c.1764C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2076C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2193C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1713C>T
  hgvsp: ENST00000455057.1:c.1713C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1287C>T
  hgvsp: ENST00000416074.2:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1192C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2022C>T
  hgvsp: ENST00000295981.3:c.2022C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1502C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1484C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2122C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1968C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7393
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His674His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

3-9974925-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974925
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974925
    reference: chr 3
allele count: 4
allele frequency: 4.29553264604811e-5
allele num: 93120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1811G>A
  hgvsp: ENSP00000384969.3:p.Gly604Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1289G>A
  hgvsp: ENSP00000395315.2:p.Gly430Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1715G>A
  hgvsp: ENSP00000407894.1:p.Gly572Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2024G>A
  hgvsp: ENSP00000295981.3:p.Gly675Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1766G>A
  hgvsp: ENSP00000373323.4:p.Gly589Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2124G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1772G>A
  hgvsp: ENSP00000396064.1:p.Gly591Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2078G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1970G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1486G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1504G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2195G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1194G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly675Asp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-9974926-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974926
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974926
    reference: chr 3
allele count: 468
allele frequency: 5.043538236054832e-3
allele num: 92792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1290C>G
  hgvsp: ENST00000416074.2:c.1290C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1773C>G
  hgvsp: ENST00000413608.1:c.1773C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2079C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1195C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1767C>G
  hgvsp: ENST00000383812.4:c.1767C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2196C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1487C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2125C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1505C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1716C>G
  hgvsp: ENST00000455057.1:c.1716C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1812C>G
  hgvsp: ENST00000403601.3:c.1812C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2025C>G
  hgvsp: ENST00000295981.3:c.2025C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1971C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16752
  bin: 1.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 1.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 2.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 8305
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly675Gly
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

3-9974926-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974926
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974926
    reference: chr 3
allele count: 1
allele frequency: 1.077679110268127e-5
allele num: 92792
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2025C>T
  hgvsp: ENST00000295981.3:c.2025C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1505C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1767C>T
  hgvsp: ENST00000383812.4:c.1767C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2125C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1290C>T
  hgvsp: ENST00000416074.2:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1773C>T
  hgvsp: ENST00000413608.1:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1716C>T
  hgvsp: ENST00000455057.1:c.1716C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1812C>T
  hgvsp: ENST00000403601.3:c.1812C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1195C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1487C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1971C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2196C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2079C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly675Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

3-9974927-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974927
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974927
    reference: chr 3
allele count: 1
allele frequency: 1.08502235146044e-5
allele num: 92164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1196C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2126C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1972C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1774C>G
  hgvsp: ENSP00000396064.1:p.Pro592Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2080C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1291C>G
  hgvsp: ENSP00000395315.2:p.Pro431Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2026C>G
  hgvsp: ENSP00000295981.3:p.Pro676Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1506C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1717C>G
  hgvsp: ENSP00000407894.1:p.Pro573Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1813C>G
  hgvsp: ENSP00000384969.3:p.Pro605Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1768C>G
  hgvsp: ENSP00000373323.4:p.Pro590Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2197C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1488C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro676Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

3-9974944-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974944
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974944
    reference: chr 3
allele count: 1
allele frequency: 1.134095445472691e-5
allele num: 88176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2097C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1785C>T
  hgvsp: ENST00000383812.4:c.1785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2214C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1791C>T
  hgvsp: ENST00000413608.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2043C>T
  hgvsp: ENST00000295981.3:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1308C>T
  hgvsp: ENST00000416074.2:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2143C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1734C>T
  hgvsp: ENST00000455057.1:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1830C>T
  hgvsp: ENST00000403601.3:c.1830C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1213C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1505C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1989C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1523C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg681Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-9974945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974945
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974945
    reference: chr 3
allele count: 1
allele frequency: 1.143484425742121e-5
allele num: 87452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1524G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1990G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2044G>A
  hgvsp: ENSP00000295981.3:p.Ala682Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1735G>A
  hgvsp: ENSP00000407894.1:p.Ala579Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2215G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1309G>A
  hgvsp: ENSP00000395315.2:p.Ala437Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2144G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1831G>A
  hgvsp: ENSP00000384969.3:p.Ala611Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1792G>A
  hgvsp: ENSP00000396064.1:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1786G>A
  hgvsp: ENSP00000373323.4:p.Ala596Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1214G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2098G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1506G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala682Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-9974946-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974946
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974946
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 87744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1736C>A
  hgvsp: ENSP00000407894.1:p.Ala579Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2045C>A
  hgvsp: ENSP00000295981.3:p.Ala682Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1525C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1832C>A
  hgvsp: ENSP00000384969.3:p.Ala611Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2216C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1787C>A
  hgvsp: ENSP00000373323.4:p.Ala596Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1793C>A
  hgvsp: ENSP00000396064.1:p.Ala598Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1215C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1991C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1310C>A
  hgvsp: ENSP00000395315.2:p.Ala437Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2145C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1507C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2099C>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11928
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala682Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-9974949-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974949
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974949
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 87088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1528C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1796C>G
  hgvsp: ENSP00000396064.1:p.Ser599Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2048C>G
  hgvsp: ENSP00000295981.3:p.Ser683Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1790C>G
  hgvsp: ENSP00000373323.4:p.Ser597Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2148C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1739C>G
  hgvsp: ENSP00000407894.1:p.Ser580Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1218C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1994C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1835C>G
  hgvsp: ENSP00000384969.3:p.Ser612Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1313C>G
  hgvsp: ENSP00000395315.2:p.Ser438Trp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2102C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2219C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1510C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12093
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser683Trp
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

3-9974951-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974951
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974951
    reference: chr 3
allele count: 5
allele frequency: 5.722657144165179e-5
allele num: 87372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1315C>G
  hgvsp: ENSP00000395315.2:p.Leu439Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1741C>G
  hgvsp: ENSP00000407894.1:p.Leu581Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1792C>G
  hgvsp: ENSP00000373323.4:p.Leu598Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1512C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1798C>G
  hgvsp: ENSP00000396064.1:p.Leu600Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2150C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1220C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1996C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2050C>G
  hgvsp: ENSP00000295981.3:p.Leu684Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1530C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1837C>G
  hgvsp: ENSP00000384969.3:p.Leu613Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2104C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2221C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18173
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12202
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu684Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

3-9974953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974953
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974953
    reference: chr 3
allele count: 1
allele frequency: 1.150245002185465e-5
allele num: 86938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1800C>T
  hgvsp: ENST00000413608.1:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1317C>T
  hgvsp: ENST00000416074.2:c.1317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2052C>T
  hgvsp: ENST00000295981.3:c.2052C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.1998C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2223C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1743C>T
  hgvsp: ENST00000455057.1:c.1743C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1794C>T
  hgvsp: ENST00000383812.4:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1839C>T
  hgvsp: ENST00000403601.3:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2106C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2152C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1222C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1514C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1532C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11364
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu684Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

3-9974962-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974962
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974962
    reference: chr 3
allele count: 1
allele frequency: 1.154227936932986e-5
allele num: 86638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1231G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2161G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2007G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1809G>C
  hgvsp: ENST00000413608.1:c.1809G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1541G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1523G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2115G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2061G>C
  hgvsp: ENST00000295981.3:c.2061G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1803G>C
  hgvsp: ENST00000383812.4:c.1803G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1848G>C
  hgvsp: ENST00000403601.3:c.1848G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1752G>C
  hgvsp: ENST00000455057.1:c.1752G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2232G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1326G>C
  hgvsp: ENST00000416074.2:c.1326G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val687Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP

3-9974964-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974964
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974964
    reference: chr 3
allele count: 1
allele frequency: 1.150562625123686e-5
allele num: 86914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2234T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1525T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1543T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1850T>C
  hgvsp: ENSP00000384969.3:p.Leu617Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1811T>C
  hgvsp: ENSP00000396064.1:p.Leu604Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2117T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1754T>C
  hgvsp: ENSP00000407894.1:p.Leu585Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1328T>C
  hgvsp: ENSP00000395315.2:p.Leu443Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2063T>C
  hgvsp: ENSP00000295981.3:p.Leu688Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1805T>C
  hgvsp: ENSP00000373323.4:p.Leu602Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2009T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1233T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2163T>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12075
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu688Pro
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

3-9974971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974971
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974971
    reference: chr 3
allele count: 1
allele frequency: 1.152923814794318e-5
allele num: 86736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1240C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1857C>T
  hgvsp: ENST00000403601.3:c.1857C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1335C>T
  hgvsp: ENST00000416074.2:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1812C>T
  hgvsp: ENST00000383812.4:c.1812C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2070C>T
  hgvsp: ENST00000295981.3:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1550C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2170C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2241C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1761C>T
  hgvsp: ENST00000455057.1:c.1761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2016C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1532C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2124C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1818C>T
  hgvsp: ENST00000413608.1:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18048
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp690Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

3-9974976-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974976
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974976
    reference: chr 3
allele count: 21
allele frequency: 2.441292722622646e-4
allele num: 86020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1862T>C
  hgvsp: ENSP00000384969.3:p.Leu621Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1766T>C
  hgvsp: ENSP00000407894.1:p.Leu589Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2129T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1340T>C
  hgvsp: ENSP00000395315.2:p.Leu447Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1817T>C
  hgvsp: ENSP00000373323.4:p.Leu606Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1245T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1823T>C
  hgvsp: ENSP00000396064.1:p.Leu608Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2246T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2175T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2075T>C
  hgvsp: ENSP00000295981.3:p.Leu692Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1555T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1537T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2021T>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18033
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu692Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ

3-9974980-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974980
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974980
    reference: chr 3
allele count: 1
allele frequency: 1.168633867009466e-5
allele num: 85570
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1344G>C
  hgvsp: ENSP00000395315.2:p.Gln448His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1249G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2250G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1821G>C
  hgvsp: ENSP00000373323.4:p.Gln607His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2079G>C
  hgvsp: ENSP00000295981.3:p.Gln693His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1559G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1541G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2179G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2133G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1866G>C
  hgvsp: ENSP00000384969.3:p.Gln622His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1770G>C
  hgvsp: ENSP00000407894.1:p.Gln590His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2025G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1827G>C
  hgvsp: ENSP00000396064.1:p.Gln609His
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln693His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

3-9974981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974981
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974981
    reference: chr 3
allele count: 3
allele frequency: 3.502954158006585e-5
allele num: 85642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1542G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1867G>A
  hgvsp: ENSP00000384969.3:p.Gly623Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1822G>A
  hgvsp: ENSP00000373323.4:p.Gly608Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1828G>A
  hgvsp: ENSP00000396064.1:p.Gly610Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1250G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2080G>A
  hgvsp: ENSP00000295981.3:p.Gly694Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1345G>A
  hgvsp: ENSP00000395315.2:p.Gly449Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2180G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1771G>A
  hgvsp: ENSP00000407894.1:p.Gly591Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2134G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2026G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1560G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2251G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11025
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly694Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS

3-9974983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974983
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974983
    reference: chr 3
allele count: 2
allele frequency: 2.342688469287354e-5
allele num: 85372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2082C>T
  hgvsp: ENST00000295981.3:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2182C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2136C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1824C>T
  hgvsp: ENST00000383812.4:c.1824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2253C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1830C>T
  hgvsp: ENST00000413608.1:c.1830C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1544C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1869C>T
  hgvsp: ENST00000403601.3:c.1869C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1347C>T
  hgvsp: ENST00000416074.2:c.1347C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2028C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1773C>T
  hgvsp: ENST00000455057.1:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1562C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1252C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17615
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly694Gly
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-9974985-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974985
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974985
    reference: chr 3
allele count: 24
allele frequency: 2.81524926686217e-4
allele num: 85250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2138G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2255G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1564G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1349G>A
  hgvsp: ENSP00000395315.2:p.Arg450Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1826G>A
  hgvsp: ENSP00000373323.4:p.Arg609Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2184G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1775G>A
  hgvsp: ENSP00000407894.1:p.Arg592Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1832G>A
  hgvsp: ENSP00000396064.1:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2084G>A
  hgvsp: ENSP00000295981.3:p.Arg695Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1871G>A
  hgvsp: ENSP00000384969.3:p.Arg624Gln
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2030G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1254G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1546G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17430
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12954
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8913
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Arg695Gln
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

3-9974987-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974987
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974987
    reference: chr 3
allele count: 2
allele frequency: 2.334212553395112e-5
allele num: 85682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1834G>A
  hgvsp: ENSP00000396064.1:p.Ala612Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1566G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2086G>A
  hgvsp: ENSP00000295981.3:p.Ala696Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1256G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2032G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2257G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1828G>A
  hgvsp: ENSP00000373323.4:p.Ala610Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1777G>A
  hgvsp: ENSP00000407894.1:p.Ala593Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1548G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1873G>A
  hgvsp: ENSP00000384969.3:p.Ala625Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2186G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2140G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1351G>A
  hgvsp: ENSP00000395315.2:p.Ala451Thr
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala696Thr
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

3-9974992-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974992
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974992
    reference: chr 3
allele count: 2
allele frequency: 2.330785008390826e-5
allele num: 85808
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2091C>T
  hgvsp: ENST00000295981.3:c.2091C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1553C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1839C>T
  hgvsp: ENST00000413608.1:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1833C>T
  hgvsp: ENST00000383812.4:c.1833C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2191C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1571C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1356C>T
  hgvsp: ENST00000416074.2:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2145C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2037C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1878C>T
  hgvsp: ENST00000403601.3:c.1878C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1782C>T
  hgvsp: ENST00000455057.1:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2262C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1261C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13012
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12170
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro697Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-9974993-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974993
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974993
    reference: chr 3
allele count: 1
allele frequency: 1.158211721102618e-5
allele num: 86340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1554G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1262G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1834G>A
  hgvsp: ENSP00000373323.4:p.Gly612Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2092G>A
  hgvsp: ENSP00000295981.3:p.Gly698Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1879G>A
  hgvsp: ENSP00000384969.3:p.Gly627Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1572G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2192G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1783G>A
  hgvsp: ENSP00000407894.1:p.Gly595Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1840G>A
  hgvsp: ENSP00000396064.1:p.Gly614Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1357G>A
  hgvsp: ENSP00000395315.2:p.Gly453Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2038G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2263G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2146G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12524
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly698Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

3-9974996-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9974996
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9974996
    reference: chr 3
allele count: 1
allele frequency: 1.149716020143025e-5
allele num: 86978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2149A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1575A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1882A>G
  hgvsp: ENSP00000384969.3:p.Ser628Gly
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2266A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1360A>G
  hgvsp: ENSP00000395315.2:p.Ser454Gly
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1837A>G
  hgvsp: ENSP00000373323.4:p.Ser613Gly
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1786A>G
  hgvsp: ENSP00000407894.1:p.Ser596Gly
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1557A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1843A>G
  hgvsp: ENSP00000396064.1:p.Ser615Gly
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2195A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2041A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1265A>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2095A>G
  hgvsp: ENSP00000295981.3:p.Ser699Gly
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser699Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ

3-9975003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975003
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975003
    reference: chr 3
allele count: 1
allele frequency: 1.138744647900155e-5
allele num: 87816
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1272T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1844T>C
  hgvsp: ENSP00000373323.4:p.Val615Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1564T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1889T>C
  hgvsp: ENSP00000384969.3:p.Val630Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1367T>C
  hgvsp: ENSP00000395315.2:p.Val456Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2156T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1850T>C
  hgvsp: ENSP00000396064.1:p.Val617Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2048T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2102T>C
  hgvsp: ENSP00000295981.3:p.Val701Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1793T>C
  hgvsp: ENSP00000407894.1:p.Val598Ala
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1582T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2273T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2202T>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15621
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val701Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS

3-9975007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975007
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975007
    reference: chr 3
allele count: 1
allele frequency: 1.130020114358036e-5
allele num: 88494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1854G>A
  hgvsp: ENST00000413608.1:c.1854G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2277G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1893G>A
  hgvsp: ENST00000403601.3:c.1893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1568G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1371G>A
  hgvsp: ENST00000416074.2:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2206G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2106G>A
  hgvsp: ENST00000295981.3:c.2106G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1586G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1797G>A
  hgvsp: ENST00000455057.1:c.1797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1276G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1848G>A
  hgvsp: ENST00000383812.4:c.1848G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2160G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2052G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly702Gly
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD

3-9975008-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975008
    reference: chr 3
allele count: 1
allele frequency: 1.128006136353382e-5
allele num: 88652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2161G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1587G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2053G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2278G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1855G>A
  hgvsp: ENSP00000396064.1:p.Ala619Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1849G>A
  hgvsp: ENSP00000373323.4:p.Ala617Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1569G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2107G>A
  hgvsp: ENSP00000295981.3:p.Ala703Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1798G>A
  hgvsp: ENSP00000407894.1:p.Ala600Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1894G>A
  hgvsp: ENSP00000384969.3:p.Ala632Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1372G>A
  hgvsp: ENSP00000395315.2:p.Ala458Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2207G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1277G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16822
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala703Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

3-9975012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975012
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975012
    reference: chr 3
allele count: 1
allele frequency: 1.117393344805238e-5
allele num: 89494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2057G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1281G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1898G>A
  hgvsp: ENSP00000384969.3:p.Cys633Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2282G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2165G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1853G>A
  hgvsp: ENSP00000373323.4:p.Cys618Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2111G>A
  hgvsp: ENSP00000295981.3:p.Cys704Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1376G>A
  hgvsp: ENSP00000395315.2:p.Cys459Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2211G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1591G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1802G>A
  hgvsp: ENSP00000407894.1:p.Cys601Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1859G>A
  hgvsp: ENSP00000396064.1:p.Cys620Tyr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1573G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17497
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys704Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

3-9975018-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975018
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975018
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 90876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1597A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2063A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1904A>T
  hgvsp: ENSP00000384969.3:p.Asp635Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1865A>T
  hgvsp: ENSP00000396064.1:p.Asp622Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1859A>T
  hgvsp: ENSP00000373323.4:p.Asp620Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2171A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2117A>T
  hgvsp: ENSP00000295981.3:p.Asp706Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1287A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2288A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1808A>T
  hgvsp: ENSP00000407894.1:p.Asp603Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1579A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1382A>T
  hgvsp: ENSP00000395315.2:p.Asp461Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2217A>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13072
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp706Val
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

3-9975033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975033
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975033
    reference: chr 3
allele count: 1
allele frequency: 1.062473438164046e-5
allele num: 94120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2132C>T
  hgvsp: ENSP00000295981.3:p.Pro711Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1612C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2186C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1919C>T
  hgvsp: ENSP00000384969.3:p.Pro640Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2303C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1594C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1397C>T
  hgvsp: ENSP00000395315.2:p.Pro466Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2232C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2078C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1880C>T
  hgvsp: ENSP00000396064.1:p.Pro627Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1823C>T
  hgvsp: ENSP00000407894.1:p.Pro608Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1874C>T
  hgvsp: ENSP00000373323.4:p.Pro625Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1302C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro711Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-9975043-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975043
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975043
    reference: chr 3
allele count: 1
allele frequency: 1.020408163265306e-5
allele num: 98000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1890A>C
  hgvsp: ENST00000413608.1:c.1890A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2088A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2142A>C
  hgvsp: ENST00000295981.3:c.2142A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2196A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1929A>C
  hgvsp: ENST00000403601.3:c.1929A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2313A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2242A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1312A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1884A>C
  hgvsp: ENST00000383812.4:c.1884A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1622A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1833A>C
  hgvsp: ENST00000455057.1:c.1833A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1407A>C
  hgvsp: ENST00000416074.2:c.1407A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1604A>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val714Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-9975049-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975049
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975049
    reference: chr 3
allele count: 1
allele frequency: 9.941543722909294e-6
allele num: 100588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1610C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1413C>A
  hgvsp: ENST00000416074.2:c.1413C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2202C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1839C>A
  hgvsp: ENST00000455057.1:c.1839C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2148C>A
  hgvsp: ENST00000295981.3:c.2148C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1318C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1896C>A
  hgvsp: ENST00000413608.1:c.1896C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2094C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2248C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1628C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1890C>A
  hgvsp: ENST00000383812.4:c.1890C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1935C>A
  hgvsp: ENST00000403601.3:c.1935C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2319C>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala716Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-9975054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975054
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975054
    reference: chr 3
allele count: 3
allele frequency: 2.945103274954842e-5
allele num: 101864
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2153T>C
  hgvsp: ENSP00000295981.3:p.Phe718Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1901T>C
  hgvsp: ENSP00000396064.1:p.Phe634Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2253T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1844T>C
  hgvsp: ENSP00000407894.1:p.Phe615Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1418T>C
  hgvsp: ENSP00000395315.2:p.Phe473Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1940T>C
  hgvsp: ENSP00000384969.3:p.Phe647Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2207T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2324T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1633T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2099T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1323T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1895T>C
  hgvsp: ENSP00000373323.4:p.Phe632Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1615T>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9896
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31099
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe718Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

3-9975061-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975061
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975061
    reference: chr 3
allele count: 2
allele frequency: 1.931881846106292e-5
allele num: 103526
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2160C>T
  hgvsp: ENST00000295981.3:c.2160C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2331C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2214C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1330C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2260C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1622C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1908C>T
  hgvsp: ENST00000413608.1:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1851C>T
  hgvsp: ENST00000455057.1:c.1851C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1425C>T
  hgvsp: ENST00000416074.2:c.1425C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1902C>T
  hgvsp: ENST00000383812.4:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1640C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1947C>T
  hgvsp: ENST00000403601.3:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2106C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr720Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-9975062-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975062
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975062
    reference: chr 3
allele count: 8
allele frequency: 7.707277596870845e-5
allele num: 103798
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1623G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1426G>C
  hgvsp: ENSP00000395315.2:p.Val476Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2261G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1331G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1909G>C
  hgvsp: ENSP00000396064.1:p.Val637Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2161G>C
  hgvsp: ENSP00000295981.3:p.Val721Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1948G>C
  hgvsp: ENSP00000384969.3:p.Val650Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1641G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2215G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1903G>C
  hgvsp: ENSP00000373323.4:p.Val635Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1852G>C
  hgvsp: ENSP00000407894.1:p.Val618Leu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2332G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2107G>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32065
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11093
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val721Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-9975067-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975067
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975067
    reference: chr 3
allele count: 1
allele frequency: 9.512213682368161e-6
allele num: 105128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1908C>G
  hgvsp: ENST00000383812.4:c.1908C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2220C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1646C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1953C>G
  hgvsp: ENST00000403601.3:c.1953C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1914C>G
  hgvsp: ENST00000413608.1:c.1914C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2166C>G
  hgvsp: ENST00000295981.3:c.2166C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2266C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1431C>G
  hgvsp: ENST00000416074.2:c.1431C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2112C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2337C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1857C>G
  hgvsp: ENST00000455057.1:c.1857C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1336C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1628C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro722Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

3-9975067-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975067
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975067
    reference: chr 3
allele count: 3
allele frequency: 2.853664104710448e-5
allele num: 105128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2220C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1646C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1431C>T
  hgvsp: ENST00000416074.2:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1908C>T
  hgvsp: ENST00000383812.4:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2166C>T
  hgvsp: ENST00000295981.3:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1336C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2112C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2266C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1857C>T
  hgvsp: ENST00000455057.1:c.1857C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2337C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1953C>T
  hgvsp: ENST00000403601.3:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1628C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1914C>T
  hgvsp: ENST00000413608.1:c.1914C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32804
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro722Pro
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

3-9975074-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975074
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975074
    reference: chr 3
allele count: 6
allele frequency: 5.63084199857352e-5
allele num: 106556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1635A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1438A>T
  hgvsp: ENSP00000395315.2:p.Thr480Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2273A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1960A>T
  hgvsp: ENSP00000384969.3:p.Thr654Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1921A>T
  hgvsp: ENSP00000396064.1:p.Thr641Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2344A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1915A>T
  hgvsp: ENSP00000373323.4:p.Thr639Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1343A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1653A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2227A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2173A>T
  hgvsp: ENSP00000295981.3:p.Thr725Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1864A>T
  hgvsp: ENSP00000407894.1:p.Thr622Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2119A>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33706
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12337
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr725Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/3-9975085-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975085
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975085
    reference: chr 3
allele count: 4
allele frequency: 3.705281879318969e-5
allele num: 107954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1875C>A
  hgvsp: ENST00000455057.1:c.1875C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1926C>A
  hgvsp: ENST00000383812.4:c.1926C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1354C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1646C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2184C>A
  hgvsp: ENST00000295981.3:c.2184C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1971C>A
  hgvsp: ENST00000403601.3:c.1971C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2284C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1449C>A
  hgvsp: ENST00000416074.2:c.1449C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2130C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1932C>A
  hgvsp: ENST00000413608.1:c.1932C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2238C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2355C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1664C>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34003
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser728Ser
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

3-9975095-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975095
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975095
    reference: chr 3
allele count: 1
allele frequency: 9.219308920603312e-6
allele num: 108468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2140G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1936G>C
  hgvsp: ENSP00000373323.4:p.Asp646His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1459G>C
  hgvsp: ENSP00000395315.2:p.Asp487His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1942G>C
  hgvsp: ENSP00000396064.1:p.Asp648His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2194G>C
  hgvsp: ENSP00000295981.3:p.Asp732His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1364G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1885G>C
  hgvsp: ENSP00000407894.1:p.Asp629His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2365G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1674G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2294G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1656G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2248G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1981G>C
  hgvsp: ENSP00000384969.3:p.Asp661His
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp732His
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

3-9975102-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975102
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975102
    reference: chr 3
allele count: 1
allele frequency: 9.223730814639905e-6
allele num: 108416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1371T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2201T>C
  hgvsp: ENSP00000295981.3:p.Leu734Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2147T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2301T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1892T>C
  hgvsp: ENSP00000407894.1:p.Leu631Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2372T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2255T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1466T>C
  hgvsp: ENSP00000395315.2:p.Leu489Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1681T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1663T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1949T>C
  hgvsp: ENSP00000396064.1:p.Leu650Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1943T>C
  hgvsp: ENSP00000373323.4:p.Leu648Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1988T>C
  hgvsp: ENSP00000384969.3:p.Leu663Pro
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu734Pro
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-9975102-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975102
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975102
    reference: chr 3
allele count: 1
allele frequency: 9.223730814639905e-6
allele num: 108416
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1466T>G
  hgvsp: ENSP00000395315.2:p.Leu489Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2201T>G
  hgvsp: ENSP00000295981.3:p.Leu734Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1681T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2147T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2255T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1949T>G
  hgvsp: ENSP00000396064.1:p.Leu650Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1892T>G
  hgvsp: ENSP00000407894.1:p.Leu631Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1988T>G
  hgvsp: ENSP00000384969.3:p.Leu663Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1663T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1943T>G
  hgvsp: ENSP00000373323.4:p.Leu648Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1371T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2372T>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2301T>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu734Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

3-9975108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975108
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975108
    reference: chr 3
allele count: 43
allele frequency: 3.962768408441618e-4
allele num: 108510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1955C>T
  hgvsp: ENSP00000396064.1:p.Ala652Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1949C>T
  hgvsp: ENSP00000373323.4:p.Ala650Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.1994C>T
  hgvsp: ENSP00000384969.3:p.Ala665Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2207C>T
  hgvsp: ENSP00000295981.3:p.Ala736Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1898C>T
  hgvsp: ENSP00000407894.1:p.Ala633Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1669C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2378C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1687C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2307C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2153C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1377C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1472C>T
  hgvsp: ENSP00000395315.2:p.Ala491Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2261C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32962
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala736Val
num of homozygotes: 1
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

3-9975119-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975119
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975119
    reference: chr 3
allele count: 1
allele frequency: 9.245391172500508e-6
allele num: 108162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2318C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2218C>T
  hgvsp: ENSP00000295981.3:p.Pro740Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2164C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1388C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1909C>T
  hgvsp: ENSP00000407894.1:p.Pro637Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1960C>T
  hgvsp: ENSP00000373323.4:p.Pro654Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2005C>T
  hgvsp: ENSP00000384969.3:p.Pro669Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2389C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1966C>T
  hgvsp: ENSP00000396064.1:p.Pro656Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1698C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1483C>T
  hgvsp: ENSP00000395315.2:p.Pro495Ser
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2272C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1680C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro740Ser
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/3-9975126-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975126
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975126
    reference: chr 3
allele count: 1
allele frequency: 9.27540533521315e-6
allele num: 107812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1705C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2012C>A
  hgvsp: ENSP00000384969.3:p.Ala671Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1490C>A
  hgvsp: ENSP00000395315.2:p.Ala497Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2225C>A
  hgvsp: ENSP00000295981.3:p.Ala742Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2171C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1967C>A
  hgvsp: ENSP00000373323.4:p.Ala656Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1395C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1973C>A
  hgvsp: ENSP00000396064.1:p.Ala658Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2279C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2325C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1916C>A
  hgvsp: ENSP00000407894.1:p.Ala639Asp
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1687C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2396C>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala742Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

3-9975127-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975127
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975127
    reference: chr 3
allele count: 1
allele frequency: 9.270761871210575e-6
allele num: 107866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2326C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2280C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1491C>G
  hgvsp: ENST00000416074.2:c.1491C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2397C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1396C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1974C>G
  hgvsp: ENST00000413608.1:c.1974C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2226C>G
  hgvsp: ENST00000295981.3:c.2226C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1917C>G
  hgvsp: ENST00000455057.1:c.1917C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1706C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1968C>G
  hgvsp: ENST00000383812.4:c.1968C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2013C>G
  hgvsp: ENST00000403601.3:c.2013C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1688C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2172C>G
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala742Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

3-9975129-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975129
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975129
    reference: chr 3
allele count: 1
allele frequency: 9.285568369639905e-6
allele num: 107694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1690C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2328C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1493C>G
  hgvsp: ENSP00000395315.2:p.Pro498Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2282C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1970C>G
  hgvsp: ENSP00000373323.4:p.Pro657Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2228C>G
  hgvsp: ENSP00000295981.3:p.Pro743Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1976C>G
  hgvsp: ENSP00000396064.1:p.Pro659Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1398C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2015C>G
  hgvsp: ENSP00000384969.3:p.Pro672Arg
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1708C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2399C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2174C>G
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1919C>G
  hgvsp: ENSP00000407894.1:p.Pro640Arg
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro743Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-9975133-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975133
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975133
    reference: chr 3
allele count: 1
allele frequency: 9.305441822377727e-6
allele num: 107464
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1923T>C
  hgvsp: ENST00000455057.1:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1402T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1712T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1974T>C
  hgvsp: ENST00000383812.4:c.1974T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1980T>C
  hgvsp: ENST00000413608.1:c.1980T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2332T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2178T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2232T>C
  hgvsp: ENST00000295981.3:c.2232T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2019T>C
  hgvsp: ENST00000403601.3:c.2019T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1497T>C
  hgvsp: ENST00000416074.2:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2286T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2403T>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1694T>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg744Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

3-9975136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975136
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975136
    reference: chr 3
allele count: 10
allele frequency: 9.341952841822055e-5
allele num: 107044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2289C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1697C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2181C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1405C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2406C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1715C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2335C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1983C>T
  hgvsp: ENST00000413608.1:c.1983C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1977C>T
  hgvsp: ENST00000383812.4:c.1977C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2022C>T
  hgvsp: ENST00000403601.3:c.2022C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1926C>T
  hgvsp: ENST00000455057.1:c.1926C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1500C>T
  hgvsp: ENST00000416074.2:c.1500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2235C>T
  hgvsp: ENST00000295981.3:c.2235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser745Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

3-9975139-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975139
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975139
    reference: chr 3
allele count: 1130
allele frequency: 1.057023123550101e-2
allele num: 106904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2025G>A
  hgvsp: ENST00000403601.3:c.2025G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2338G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2292G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1986G>A
  hgvsp: ENST00000413608.1:c.1986G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2409G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2184G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1408G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2238G>A
  hgvsp: ENST00000295981.3:c.2238G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1503G>A
  hgvsp: ENST00000416074.2:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1980G>A
  hgvsp: ENST00000383812.4:c.1980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1718G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1929G>A
  hgvsp: ENST00000455057.1:c.1929G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1700G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 1.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 13840
  bin: 2.75e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 29688
  bin: 2.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 227
genotype quality: GenotypeQuality
hgvs: p.Gly746Gly
num of homozygotes: 16
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP

3-9975143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975143
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975143
    reference: chr 3
allele count: 1
allele frequency: 9.390024038461539e-6
allele num: 106496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1990C>T
  hgvsp: ENSP00000396064.1:p.Leu664Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2188C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1933C>T
  hgvsp: ENSP00000407894.1:p.Leu645Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2296C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1722C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1507C>T
  hgvsp: ENSP00000395315.2:p.Leu503Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1412C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2029C>T
  hgvsp: ENSP00000384969.3:p.Leu677Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1704C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2413C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1984C>T
  hgvsp: ENSP00000373323.4:p.Leu662Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2242C>T
  hgvsp: ENSP00000295981.3:p.Leu748Phe
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2342C>T
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29459
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu748Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/3-9975147-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975147
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975147
    reference: chr 3
allele count: 2
allele frequency: 1.886507696951403e-5
allele num: 106016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2300A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1416A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2346A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1708A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2417A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2246A>C
  hgvsp: ENSP00000295981.3:p.Gln749Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1994A>C
  hgvsp: ENSP00000396064.1:p.Gln665Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2033A>C
  hgvsp: ENSP00000384969.3:p.Gln678Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1988A>C
  hgvsp: ENSP00000373323.4:p.Gln663Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1937A>C
  hgvsp: ENSP00000407894.1:p.Gln646Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1511A>C
  hgvsp: ENSP00000395315.2:p.Gln504Pro
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2192A>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1726A>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13805
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln749Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-9975147-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975147
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975145
    reference: chr 3
allele count: 1
allele frequency: 9.432538484757017e-6
allele num: 106016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1423_*1424delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1995_1996delAG
  hgvsp: ENSP00000373323.4:p.Arg665SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2424_2425delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1518_1519delAG
  hgvsp: ENSP00000395315.2:p.Arg506SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2253_2254delAG
  hgvsp: ENSP00000295981.3:p.Arg751SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2307_2308delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1733_*1734delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1944_1945delAG
  hgvsp: ENSP00000407894.1:p.Arg648SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2199_2200delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2353_2354delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1715_1716delAG
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2040_2041delAG
  hgvsp: ENSP00000384969.3:p.Arg680SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2001_2002delAG
  hgvsp: ENSP00000396064.1:p.Arg667SerfsTer14
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg751SerfsTer14
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: AAG
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

3-9975148-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975148
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975148
    reference: chr 3
allele count: 1
allele frequency: 9.439839900315291e-6
allele num: 105934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1989A>T
  hgvsp: ENSP00000373323.4:p.Gln663His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1709A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2247A>T
  hgvsp: ENSP00000295981.3:p.Gln749His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2301A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.1995A>T
  hgvsp: ENSP00000396064.1:p.Gln665His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1727A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1417A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2418A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1512A>T
  hgvsp: ENSP00000395315.2:p.Gln504His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2347A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2193A>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2034A>T
  hgvsp: ENSP00000384969.3:p.Gln678His
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1938A>T
  hgvsp: ENSP00000407894.1:p.Gln646His
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln749His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-9975153-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975153
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975153
    reference: chr 3
allele count: 1
allele frequency: 9.494512171964605e-6
allele num: 105324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2352G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2306G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2000G>C
  hgvsp: ENSP00000396064.1:p.Arg667Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2039G>C
  hgvsp: ENSP00000384969.3:p.Arg680Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2198G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1732G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2252G>C
  hgvsp: ENSP00000295981.3:p.Arg751Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1714G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1517G>C
  hgvsp: ENSP00000395315.2:p.Arg506Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1943G>C
  hgvsp: ENSP00000407894.1:p.Arg648Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2423G>C
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1994G>C
  hgvsp: ENSP00000373323.4:p.Arg665Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1422G>C
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg751Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

3-9975155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975155
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975155
    reference: chr 3
allele count: 1
allele frequency: 9.513118590536349e-6
allele num: 105118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2425G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1716G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1734G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2002G>A
  hgvsp: ENSP00000396064.1:p.Ala668Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2308G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1996G>A
  hgvsp: ENSP00000373323.4:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2354G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2200G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2254G>A
  hgvsp: ENSP00000295981.3:p.Ala752Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2041G>A
  hgvsp: ENSP00000384969.3:p.Ala681Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1945G>A
  hgvsp: ENSP00000407894.1:p.Ala649Thr
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1424G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1519G>A
  hgvsp: ENSP00000395315.2:p.Ala507Thr
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala752Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/3-9975156-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975156
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975156
    reference: chr 3
allele count: 2
allele frequency: 1.908433367048989e-5
allele num: 104798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1425C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1946C>A
  hgvsp: ENSP00000407894.1:p.Ala649Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2042C>A
  hgvsp: ENSP00000384969.3:p.Ala681Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2309C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2426C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2255C>A
  hgvsp: ENSP00000295981.3:p.Ala752Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1997C>A
  hgvsp: ENSP00000373323.4:p.Ala666Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2355C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1520C>A
  hgvsp: ENSP00000395315.2:p.Ala507Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1717C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2003C>A
  hgvsp: ENSP00000396064.1:p.Ala668Glu
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2201C>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1735C>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala752Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

3-9975156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975156
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975156
    reference: chr 3
allele count: 7
allele frequency: 6.679516784671464e-5
allele num: 104798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2201C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1425C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1997C>T
  hgvsp: ENSP00000373323.4:p.Ala666Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2255C>T
  hgvsp: ENSP00000295981.3:p.Ala752Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2003C>T
  hgvsp: ENSP00000396064.1:p.Ala668Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1735C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2309C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2042C>T
  hgvsp: ENSP00000384969.3:p.Ala681Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1717C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2355C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1520C>T
  hgvsp: ENSP00000395315.2:p.Ala507Val
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2426C>T
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1946C>T
  hgvsp: ENSP00000407894.1:p.Ala649Val
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12826
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26630
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala752Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

3-9975157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9975157
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9975157
    reference: chr 3
allele count: 1
allele frequency: 9.552193183554944e-6
allele num: 104688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000396064
  ensembl transcript: ENST00000413608
  gene symbol: IL17RC
  hgvsc: ENST00000413608.1:c.2004G>A
  hgvsp: ENST00000413608.1:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000410834
  ensembl transcript: ENST00000451231
  gene symbol: IL17RC
  hgvsc: ENST00000451231.1:c.*1426G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000483582
  gene symbol: IL17RC
  hgvsc: ENST00000483582.1:n.2310G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000395315
  ensembl transcript: ENST00000416074
  gene symbol: IL17RC
  hgvsc: ENST00000416074.2:c.1521G>A
  hgvsp: ENST00000416074.2:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000373323
  ensembl transcript: ENST00000383812
  gene symbol: IL17RC
  hgvsc: ENST00000383812.4:c.1998G>A
  hgvsp: ENST00000383812.4:c.1998G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000295981
  ensembl transcript: ENST00000295981
  gene symbol: IL17RC
  hgvsc: ENST00000295981.3:c.2256G>A
  hgvsp: ENST00000295981.3:c.2256G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000384969
  ensembl transcript: ENST00000403601
  gene symbol: IL17RC
  hgvsc: ENST00000403601.3:c.2043G>A
  hgvsp: ENST00000403601.3:c.2043G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000494365
  gene symbol: IL17RC
  hgvsc: ENST00000494365.1:n.2356G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000497387
  gene symbol: IL17RC
  hgvsc: ENST00000497387.1:n.1718G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000407894
  ensembl transcript: ENST00000455057
  gene symbol: IL17RC
  hgvsc: ENST00000455057.1:c.1947G>A
  hgvsp: ENST00000455057.1:c.1947G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163702
  ensembl protein: ENSP00000412777
  ensembl transcript: ENST00000451271
  gene symbol: IL17RC
  hgvsc: ENST00000451271.1:c.*1736G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000466046
  gene symbol: IL17RC
  hgvsc: ENST00000466046.1:n.2427G>A
  variant of: http://identifiers.org/hgnc/18358
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163702
  ensembl transcript: ENST00000498214
  gene symbol: IL17RC
  hgvsc: ENST00000498214.1:n.2202G>A
  variant of: http://identifiers.org/hgnc/18358
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26465
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala752Ala
num of homozygotes: 0
population: Other
reference allele: G

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4858
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1475
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2409
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14808
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1015
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.834458467860288e-5
allele num: 54512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.61e-1

DP
type: SiteQuality
SIO_000300: 1.091492e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.447e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.732e-1

QD
type: SiteQuality
SIO_000300: 1.193e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

GenotypeDepth
all individuals: 11721
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4964
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 434
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 532
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25406
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2782
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.367296570523447e-5
allele num: 54294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4032
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.445086705202312e-3
allele num: 692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13524
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.661e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.081179e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2238
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25406
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 902
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4032
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.254705144291092e-4
allele num: 7970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 2.661e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

DP
type: SiteQuality
SIO_000300: 1.081179e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.04e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16636
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22237
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7818
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.420599584446424e-5
allele num: 13476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.28e-2

QD
type: SiteQuality
SIO_000300: 3.111e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.048959e6

MQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

GenotypeDepth
all individuals: 10916
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2462
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5595
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16158
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22827
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53548
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.966038855109002e-4
allele num: 13486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7322
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.048802e6

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.525e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16318
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53602
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.072511265874642e-4
allele num: 9764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

MQ
type: SiteQuality
SIO_000300: 5.931e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

DP
type: SiteQuality
SIO_000300: 1.048299e6

VQSLOD
type: SiteQuality
SIO_000300: -4.467e-1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 4.25e1
variant carriers: 6

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4844
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1917
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 416
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2953
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 794
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 16840
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5367
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.75e1
variant carriers: 68

GenotypeQuality
all individuals: 2423
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3047
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1624
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14811
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 5
allele frequency: 5.264266161297116e-4
allele num: 9498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 64
allele frequency: 1.239253349856711e-3
allele num: 51644
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.665955745134631e-4
allele num: 7502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.513148009015778e-5
allele num: 13310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

FS
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 9.83895e5

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.197e1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8930
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5288
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4836
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2979
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17405
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.333688983728994e-4
allele num: 7498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.776e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

QD
type: SiteQuality
SIO_000300: 1.134e1

DP
type: SiteQuality
SIO_000300: 9.77589e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.247e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.323e0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9917
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2957
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1556
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.936633356572934e-5
allele num: 51636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

QD
type: SiteQuality
SIO_000300: 7.91e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

DP
type: SiteQuality
SIO_000300: 9.77845e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.46e-1

GenotypeDepth
all individuals: 8766
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17851
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4837
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1052
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.459346561241235e-5
allele num: 13406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.825695199627155e-5
allele num: 51496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.988e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.494e0

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 2.0603e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 9.72878e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 1.017e1

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 136
bin: 3.75e1
variant carriers: 31

GenotypeQuality
all individuals: 863
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 77
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4945
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2972
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17249
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 349
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 17960
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 240
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 519
bin: 9.75e1
variant carriers: 453

South Asian
type: Population
allele count: 121
allele frequency: 9.00699717135626e-3
allele num: 13434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.795751315533035e-5
allele num: 51310
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 7.64525993883792e-3
allele num: 654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.686727565824826e-4
allele num: 7444
num of homozygotes: 0

East Asian
type: Population
allele count: 43
allele frequency: 6.171067738231917e-3
allele num: 6968
num of homozygotes: 0

Latino
type: Population
allele count: 293
allele frequency: 3.116358221654967e-2
allele num: 9402
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.63245e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17960
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17249
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4945
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.948937828883259e-5
allele num: 51310
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.63245e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12395
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 977
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18062
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1044
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.961245783321566e-5
allele num: 50988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.763e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.46674e5

QD
type: SiteQuality
SIO_000300: 1.872e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11184
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6207
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3645
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5598
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18991
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3661
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.048780487804878e-4
allele num: 3280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.491e1

DP
type: SiteQuality
SIO_000300: 8.85579e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 3.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 18199
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11879
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10988
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5655
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1307
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3729
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6286
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3693
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18558
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.488392990864161e-5
allele num: 13354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.353e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.082e1

DP
type: SiteQuality
SIO_000300: 8.78933e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.816e0

FS
type: SiteQuality
SIO_000300: 6.569e0

MQ
type: SiteQuality
SIO_000300: 5.752e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.569e0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5668
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3745
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18859
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13402
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.231e1

VQSLOD
type: SiteQuality
SIO_000300: -3.39e0

DP
type: SiteQuality
SIO_000300: 8.79694e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.054e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

GenotypeDepth
all individuals: 737
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3755
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 396
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3803
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6336
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10924
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47838
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.73516e5

MQRankSum
type: SiteQuality
SIO_000300: 9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 1.527e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.33e-1

GenotypeDepth
all individuals: 4627
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5665
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1485
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3798
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.041319560146618e-4
allele num: 48016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.829e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.461e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.458e0

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 1.2422e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.75114e5

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18212
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11967
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6314
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19092
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3805
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47714
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.426110203475419e-5
allele num: 13466
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

QD
type: SiteQuality
SIO_000300: 6.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

DP
type: SiteQuality
SIO_000300: 8.72782e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.112e0

MQ
type: SiteQuality
SIO_000300: 5.777e1

GenotypeDepth
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6192
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1041
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.369196757553427e-5
allele num: 13570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-1

DP
type: SiteQuality
SIO_000300: 8.71837e5

GenotypeDepth
all individuals: 737
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19654
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5636
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.099605274208449e-5
allele num: 47628
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.756e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.12e0

VQSLOD
type: SiteQuality
SIO_000300: -3.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e0

DP
type: SiteQuality
SIO_000300: 8.71196e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6179
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 941
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19531
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3896
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5694
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13722
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

QD
type: SiteQuality
SIO_000300: 1.798e1

DP
type: SiteQuality
SIO_000300: 8.70865e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3975
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3635
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5777
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 455
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18722
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 11297
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 4.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 4.247547041583486e-4
allele num: 47086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.035822707953856e-4
allele num: 3294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

DP
type: SiteQuality
SIO_000300: 8.6486e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18646
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3945
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11425
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.579279848389134e-4
allele num: 6332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.155e0

DP
type: SiteQuality
SIO_000300: 8.65994e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4455
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5716
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6317
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18718
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 11592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.267850283812044e-5
allele num: 46862
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.661129568106312e-3
allele num: 602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3288
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.504e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.367e1

DP
type: SiteQuality
SIO_000300: 8.66531e5

FS
type: SiteQuality
SIO_000300: 5.43e0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4421
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6396
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3843
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5746
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18070
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10319
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.571832756994656e-4
allele num: 6362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.188495364868077e-4
allele num: 8414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13684
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 8.65126e5

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

GenotypeDepth
all individuals: 4533
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 607
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12324
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6170
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 1448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1145
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18799
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3900
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5614
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 870
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3630
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 3.617489776659327e-3
allele num: 6358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13704
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.189060642092747e-4
allele num: 8410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.396e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

DP
type: SiteQuality
SIO_000300: 8.73058e5

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13060
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18259
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3783
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1782
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5673
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46846
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.454122437109205e-4
allele num: 13754
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 8.70247e5

QD
type: SiteQuality
SIO_000300: 1.353e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4623
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6033
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5511
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3671
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1545
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13822
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.156565656565657e-4
allele num: 6336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

MQRankSum
type: SiteQuality
SIO_000300: 7.45e-1

DP
type: SiteQuality
SIO_000300: 8.84488e5

FS
type: SiteQuality
SIO_000300: 3.667e0

VQSLOD
type: SiteQuality
SIO_000300: -2.932e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13024
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18666
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5970
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3634
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5443
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3558
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.207726683004181e-5
allele num: 13874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 8.89568e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

QD
type: SiteQuality
SIO_000300: 8.42e0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4907
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18789
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5777
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 341
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3384
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.175088131609871e-4
allele num: 8510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.634e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

FS
type: SiteQuality
SIO_000300: 3.682e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.169e0

DP
type: SiteQuality
SIO_000300: 9.00546e5

QD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 939
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18601
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4972
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5267
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16895
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3042
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.530924678505818e-4
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48042
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 7.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

VQSLOD
type: SiteQuality
SIO_000300: -1.371e0

DP
type: SiteQuality
SIO_000300: 9.26466e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

FS
type: SiteQuality
SIO_000300: 4.427e0

GenotypeDepth
all individuals: 141
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2897
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4796
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17278
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5049
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.108330963889678e-5
allele num: 14068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48380
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.157e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.861e1

FS
type: SiteQuality
SIO_000300: 1.372e1

DP
type: SiteQuality
SIO_000300: 9.40969e5

VQSLOD
type: SiteQuality
SIO_000300: -1.809e0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18150
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4956
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.062110776590918e-5
allele num: 48494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.085e0

FS
type: SiteQuality
SIO_000300: 4.669e0

DP
type: SiteQuality
SIO_000300: 9.45968e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.433e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeDepth
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17485
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2835
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4810
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.071135624381275e-5
allele num: 14142
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 9.61921e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

QD
type: SiteQuality
SIO_000300: 7.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

GenotypeDepth
all individuals: 19345
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16755
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2632
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.741e0

MQRankSum
type: SiteQuality
SIO_000300: -1.393e0

VQSLOD
type: SiteQuality
SIO_000300: -1.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.044e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.837e1

DP
type: SiteQuality
SIO_000300: 9.88402e5

GenotypeDepth
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 192
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25198
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.422475106685633e-4
allele num: 7030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.283e0

VQSLOD
type: SiteQuality
SIO_000300: -4.223e0

QD
type: SiteQuality
SIO_000300: 3.137e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.586e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e0

DP
type: SiteQuality
SIO_000300: 1.051244e6

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeDepth
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2505
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31124
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.857148163280467e-5
allele num: 53846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9824
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

DP
type: SiteQuality
SIO_000300: 1.115689e6

QD
type: SiteQuality
SIO_000300: 5.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

FS
type: SiteQuality
SIO_000300: 4.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34701
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.806227873708547e-5
allele num: 55364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

DP
type: SiteQuality
SIO_000300: 1.161673e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.122e0

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

VQSLOD
type: SiteQuality
SIO_000300: -9.605e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5804
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 828
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.349119178375294e-5
allele num: 56084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.830000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.319e1

DP
type: SiteQuality
SIO_000300: 1.181945e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e0

GenotypeDepth
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1571
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3805
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 885
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57102
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.930874686232864e-4
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15036
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

FS
type: SiteQuality
SIO_000300: 2.399e0

DP
type: SiteQuality
SIO_000300: 1.212635e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 1.208e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37158
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.396453009356235e-4
allele num: 57288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 3.119e1

QD
type: SiteQuality
SIO_000300: 1.004e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 1.218688e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32804
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11773
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4674
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.247816321437484e-4
allele num: 8014
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58048
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.239731e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

FS
type: SiteQuality
SIO_000300: 2.359e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.743448964312453e-4
allele num: 8014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4674
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.239731e6

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 2.359e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

GenotypeDepth
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3577
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 322
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.939592908732764e-4
allele num: 15230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.14e-1

FS
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.260354e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

QD
type: SiteQuality
SIO_000300: 1.262e1

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6814
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41192
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.603149811271639e-4
allele num: 15366
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0

VQSLOD
type: SiteQuality
SIO_000300: -3.794e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

QD
type: SiteQuality
SIO_000300: 3.328e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 3.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.282014e6

GenotypeDepth
all individuals: 13546
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6520
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41192
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4394
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.262689885142645e-5
allele num: 10796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.637e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.028e0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

FS
type: SiteQuality
SIO_000300: 2.791e0

DP
type: SiteQuality
SIO_000300: 1.287407e6

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1085
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6484
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.672017121455324e-5
allele num: 59808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5144
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 1.288039e6

QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 3.105e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6484
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59808
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.216841080554879e-4
allele num: 8218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5144
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 3.105e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

DP
type: SiteQuality
SIO_000300: 1.288039e6

QD
type: SiteQuality
SIO_000300: 1.452e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

GenotypeDepth
all individuals: 13941
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 676
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4347
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6645
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.75e1
variant carriers: 39

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

African
type: Population
allele count: 39
allele frequency: 4.758418740849195e-3
allele num: 8196
num of homozygotes: 1

Latino
type: Population
allele count: 3
allele frequency: 2.77623542476402e-4
allele num: 10806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.670174032134148e-5
allele num: 59874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.155e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.352e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

DP
type: SiteQuality
SIO_000300: 1.288747e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14095
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6829
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.674256630056255e-5
allele num: 59728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.55e0

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

FS
type: SiteQuality
SIO_000300: 4.931e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.073e1

DP
type: SiteQuality
SIO_000300: 1.282333e6

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7147
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 722
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.680163984004839e-5
allele num: 59518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15446
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.414e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.718e0

QD
type: SiteQuality
SIO_000300: 1.168e1

DP
type: SiteQuality
SIO_000300: 1.276383e6

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.678922803129512e-5
allele num: 59562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15446
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 2.991e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

QD
type: SiteQuality
SIO_000300: 1.036e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.006e0

DP
type: SiteQuality
SIO_000300: 1.276937e6

GenotypeDepth
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7364
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15434
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.278159213212098e-5
allele num: 10778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

QD
type: SiteQuality
SIO_000300: 2.488e1

VQSLOD
type: SiteQuality
SIO_000300: -2.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

DP
type: SiteQuality
SIO_000300: 1.274298e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4070
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7685
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.265822784810127e-4
allele num: 7900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15436
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.168e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 1.268335e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 6.428e0

VQSLOD
type: SiteQuality
SIO_000300: 6.79e-1

GenotypeDepth
all individuals: 5514
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 38572
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3952
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15404
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.229407425620851e-3
allele num: 8134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.154999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.375e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

DP
type: SiteQuality
SIO_000300: 1.263527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

GenotypeDepth
all individuals: 21
bin: 5.75e1
variant carriers: 16

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 9

GenotypeDepth
all individuals: 284
bin: 3.75e1
variant carriers: 104

GenotypeDepth
all individuals: 11
bin: 9.25e1
variant carriers: 11

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 521
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 737
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1301
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 235
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3792
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 729
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 209
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 591
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8117
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 37762
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1178
bin: 9.75e1
variant carriers: 1096

GenotypeQuality
all individuals: 1360
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 706
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 358
bin: 4.25e1
variant carriers: 1

Other
type: Population
allele count: 8
allele frequency: 1.036269430051814e-2
allele num: 772
num of homozygotes: 0

Latino
type: Population
allele count: 301
allele frequency: 2.807835820895522e-2
allele num: 10720
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5054
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.400409626216078e-4
allele num: 7812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.931600176253262e-4
allele num: 59006
num of homozygotes: 1

East Asian
type: Population
allele count: 162
allele frequency: 1.995073891625616e-2
allele num: 8120
num of homozygotes: 1

South Asian
type: Population
allele count: 619
allele frequency: 4.014267185473411e-2
allele num: 15420
num of homozygotes: 13

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

QD
type: SiteQuality
SIO_000300: 1.216e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.837e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.291235e6

GenotypeDepth
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5580
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 344
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8594
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.516356053694774e-5
allele num: 15346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.884e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.062e-1

DP
type: SiteQuality
SIO_000300: 1.250981e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

FS
type: SiteQuality
SIO_000300: 4.603e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

QD
type: SiteQuality
SIO_000300: 1.607e1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 85
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.416000546560088e-5
allele num: 58548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.06e0

MQ
type: SiteQuality
SIO_000300: 5.994e1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.238018e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.324e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13805
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 368
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.294665976178146e-4
allele num: 7724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.324e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

FS
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.238018e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.994e1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13737
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1908
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2228
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9303
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3756
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.708992719691014e-5
allele num: 58514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15280
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 1.297e0

DP
type: SiteQuality
SIO_000300: 1.234476e6

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.394e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.965e0

QD
type: SiteQuality
SIO_000300: 1.254e1

GenotypeDepth
all individuals: 2
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1067
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1939
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9901
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35552
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.444654325651681e-5
allele num: 10588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58162
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.24e-1

DP
type: SiteQuality
SIO_000300: 1.215969e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -7.831e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 1.057e0

QD
type: SiteQuality
SIO_000300: 6.93e0

GenotypeDepth
all individuals: 230
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12975
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 461
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35078
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.25344697919278e-4
allele num: 7978
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4924
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.442e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 3.459e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.208867e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.94e-1

QD
type: SiteQuality
SIO_000300: 9.01e0

VQSLOD
type: SiteQuality
SIO_000300: -1.52e-2

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12826
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10301
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.727533427771827e-5
allele num: 57886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.313025210084034e-4
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.204498e6

QD
type: SiteQuality
SIO_000300: 1.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

FS
type: SiteQuality
SIO_000300: 4.346e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

GenotypeDepth
all individuals: 2974
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10301
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.645149041199924e-4
allele num: 10534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.204498e6

FS
type: SiteQuality
SIO_000300: 4.346e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 1.042e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeDepth
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1807
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34071
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10497
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0