1-21307657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307657
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307657
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.94C>T
  hgvsp: ENSP00000395381.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.94C>T
  hgvsp: ENSP00000264211.7:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.94C>T
  hgvsp: ENSP00000383274.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.94C>T
  hgvsp: ENSP00000364062.4:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.94C>T
  hgvsp: ENSP00000364071.3:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.208C>T
  hgvsp: ENSP00000396083.1:p.Arg70Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.127C>T
  hgvsp: ENSP00000349386.3:p.Arg43Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.122C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.115C>T
  hgvsp: ENSP00000473510.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.115C>T
  hgvsp: ENSP00000364073.3:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg39Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

1-21307661-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307661
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307661
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.90C>T
  hgvsp: ENST00000374927.4:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.118C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.204C>T
  hgvsp: ENST00000411888.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.90C>T
  hgvsp: ENST00000400422.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.90C>T
  hgvsp: ENST00000374935.3:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.111C>T
  hgvsp: ENST00000374937.3:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.123C>T
  hgvsp: ENST00000356916.3:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.90C>T
  hgvsp: ENST00000264211.8:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.111C>T
  hgvsp: ENST00000602326.1:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.90C>T
  hgvsp: ENST00000438975.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser37Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

1-21307662-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307662
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307662
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.89C>G
  hgvsp: ENSP00000364062.4:p.Ser30Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.89C>G
  hgvsp: ENSP00000364071.3:p.Ser30Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.117C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.203C>G
  hgvsp: ENSP00000396083.1:p.Ser68Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.110C>G
  hgvsp: ENSP00000364073.3:p.Ser37Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.110C>G
  hgvsp: ENSP00000473510.1:p.Ser37Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.89C>G
  hgvsp: ENSP00000383274.1:p.Ser30Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.122C>G
  hgvsp: ENSP00000349386.3:p.Ser41Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.89C>G
  hgvsp: ENSP00000264211.7:p.Ser30Cys
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.89C>G
  hgvsp: ENSP00000395381.1:p.Ser30Cys
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser37Cys
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-21307671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307671
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.80G>A
  hgvsp: ENSP00000383274.1:p.Ser27Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.80G>A
  hgvsp: ENSP00000364062.4:p.Ser27Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.80G>A
  hgvsp: ENSP00000264211.7:p.Ser27Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.194G>A
  hgvsp: ENSP00000396083.1:p.Ser65Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.80G>A
  hgvsp: ENSP00000395381.1:p.Ser27Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.101G>A
  hgvsp: ENSP00000364073.3:p.Ser34Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.80G>A
  hgvsp: ENSP00000364071.3:p.Ser27Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.108G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.101G>A
  hgvsp: ENSP00000473510.1:p.Ser34Asn
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.113G>A
  hgvsp: ENSP00000349386.3:p.Ser38Asn
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser34Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

1-21307674-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307674
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307674
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.98A>G
  hgvsp: ENSP00000364073.3:p.Asn33Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.77A>G
  hgvsp: ENSP00000264211.7:p.Asn26Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.77A>G
  hgvsp: ENSP00000364071.3:p.Asn26Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.105A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.77A>G
  hgvsp: ENSP00000383274.1:p.Asn26Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.98A>G
  hgvsp: ENSP00000473510.1:p.Asn33Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.191A>G
  hgvsp: ENSP00000396083.1:p.Asn64Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.77A>G
  hgvsp: ENSP00000395381.1:p.Asn26Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.110A>G
  hgvsp: ENSP00000349386.3:p.Asn37Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.77A>G
  hgvsp: ENSP00000364062.4:p.Asn26Ser
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn33Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-21307677-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307677
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307677
    reference: chr 1
allele count: 6
allele frequency: 4.942420797706717e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.107C>T
  hgvsp: ENSP00000349386.3:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.95C>T
  hgvsp: ENSP00000364073.3:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.74C>T
  hgvsp: ENSP00000364071.3:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.74C>T
  hgvsp: ENSP00000383274.1:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.188C>T
  hgvsp: ENSP00000396083.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.95C>T
  hgvsp: ENSP00000473510.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.102C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.74C>T
  hgvsp: ENSP00000395381.1:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.74C>T
  hgvsp: ENSP00000264211.7:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.74C>T
  hgvsp: ENSP00000364062.4:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro32Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

1-21307678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307678
    reference: chr 1
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.73C>T
  hgvsp: ENSP00000395381.1:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.73C>T
  hgvsp: ENSP00000383274.1:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.94C>T
  hgvsp: ENSP00000473510.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.187C>T
  hgvsp: ENSP00000396083.1:p.Pro63Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.73C>T
  hgvsp: ENSP00000364062.4:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.73C>T
  hgvsp: ENSP00000364071.3:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.94C>T
  hgvsp: ENSP00000364073.3:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.106C>T
  hgvsp: ENSP00000349386.3:p.Pro36Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.73C>T
  hgvsp: ENSP00000264211.7:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.101C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37682
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro32Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

1-21307703-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307703
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307703
    reference: chr 1
allele count: 147
allele frequency: 1.211691587398407e-3
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.162A>G
  hgvsp: ENST00000411888.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.69A>G
  hgvsp: ENST00000374937.3:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.48A>G
  hgvsp: ENST00000374935.3:c.48A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.48A>G
  hgvsp: ENST00000400422.1:c.48A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.81A>G
  hgvsp: ENST00000356916.3:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.48A>G
  hgvsp: ENST00000374927.4:c.48A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.69A>G
  hgvsp: ENST00000602326.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.48A>G
  hgvsp: ENST00000264211.8:c.48A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.48A>G
  hgvsp: ENST00000438975.1:c.48A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.76A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11755
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9362
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln23Gln
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/1-21307712-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307712
    reference: chr 1
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.39G>T
  hgvsp: ENSP00000364071.3:p.Gln13His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.39G>T
  hgvsp: ENSP00000264211.7:p.Gln13His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.60G>T
  hgvsp: ENSP00000473510.1:p.Gln20His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.153G>T
  hgvsp: ENSP00000396083.1:p.Gln51His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.39G>T
  hgvsp: ENSP00000383274.1:p.Gln13His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.39G>T
  hgvsp: ENSP00000364062.4:p.Gln13His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.60G>T
  hgvsp: ENSP00000364073.3:p.Gln20His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.72G>T
  hgvsp: ENSP00000349386.3:p.Gln24His
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.67G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.39G>T
  hgvsp: ENSP00000395381.1:p.Gln13His
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12620
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln20His
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

1-21307713-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307713
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307713
    reference: chr 1
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.66A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.38A>G
  hgvsp: ENSP00000364071.3:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.38A>G
  hgvsp: ENSP00000383274.1:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.59A>G
  hgvsp: ENSP00000473510.1:p.Gln20Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.152A>G
  hgvsp: ENSP00000396083.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.71A>G
  hgvsp: ENSP00000349386.3:p.Gln24Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.38A>G
  hgvsp: ENSP00000364062.4:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.59A>G
  hgvsp: ENSP00000364073.3:p.Gln20Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.38A>G
  hgvsp: ENSP00000264211.7:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.38A>G
  hgvsp: ENSP00000395381.1:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln20Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

1-21307722-TGGGAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307722
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307717
    reference: chr 1
allele count: 1
allele frequency: 8.265965712774223e-6
allele num: 120978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7_31-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7_145-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7_31-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7_31-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7_64-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7_31-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-7_52-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-7_52-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7_31-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-7_59-3delTTCCC
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10419
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: c.52-7_52-3delTTCCC
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: TGGGAA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-21307724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307724
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307724
    reference: chr 1
allele count: 2
allele frequency: 1.656808655168415e-5
allele num: 120714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-4C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-4C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 9.75e1
  variant carriers: 2
hgvs: c.52-4C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-21307728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307728
    reference: chr 1
allele count: 1
allele frequency: 8.440100605999223e-6
allele num: 118482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-8C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-8C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
hgvs: c.52-8C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-21307732-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307732
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307733
    reference: chr 1
allele count: 1
allele frequency: 8.884466398948079e-6
allele num: 112556
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-13dupC
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-13dupC
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6665
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum

1-21307733-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307733
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307734
    reference: chr 1
allele count: 80
allele frequency: 7.717687009203342e-4
allele num: 103658
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-14dupT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-14dupT
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 1.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 2.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 14781
  bin: 1.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 4
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

1-21307733-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307733
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307732
    reference: chr 1
allele count: 2042
allele frequency: 1.969939609099153e-2
allele num: 103658
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-14delT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-14delT
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 2.25e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 2.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 14781
  bin: 1.75e1
  variant carriers: 832
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 1.25e1
  variant carriers: 850
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.5e0
  variant carriers: 363
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 1.75e1
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 2.5e0
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 9.75e1
  variant carriers: 829
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 4.25e1
  variant carriers: 132
num of homozygotes: 43
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: GA
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-21307734-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307734
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307734
    reference: chr 1
allele count: 1
allele frequency: 9.631498853851636e-6
allele num: 103826
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-14T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-14T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

1-21307735-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307735
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307735
    reference: chr 1
allele count: 1
allele frequency: 9.299557341070565e-6
allele num: 107532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-15T>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-15T>A
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14401
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

1-21307736-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307736
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307736
    reference: chr 1
allele count: 56
allele frequency: 4.991532222123184e-4
allele num: 112190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-16T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-16T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9010
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-21307741-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307741
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307741
    reference: chr 1
allele count: 1
allele frequency: 9.376289239770469e-6
allele num: 106652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-21T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-21T>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7592
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-21307742-AAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307742
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307740
    reference: chr 1
allele count: 327
allele frequency: 3.43047774910304e-3
allele num: 95322
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-24_52-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-24_145-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-24_31-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-24_64-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-24_59-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-24_52-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-24_31-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-24_31-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-24_31-23delAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-24_31-23delAT
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 1.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 9483
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14374
  bin: 2.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 1.75e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 1.25e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 7.5e0
  variant carriers: 85
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: AAT
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

1-21307742-AATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307742
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307739
    reference: chr 1
allele count: 5
allele frequency: 5.245378821258471e-5
allele num: 95322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-25_31-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-25_64-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-25_59-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-25_52-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-25_52-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-25_31-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-25_31-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-25_31-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-25_31-23delAAT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-25_145-23delAAT
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14374
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8124
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5317
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3344
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: AATT
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-21307743-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307744
    reference: chr 1
allele count: 2470
allele frequency: 4.799471475205969e-2
allele num: 51464
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-24dupA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-24dupA
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 1765
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 930
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 889
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 20716
  bin: 2.5e0
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 1.25e1
  variant carriers: 243
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 211
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum

1-21307743-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307745
    reference: chr 1
allele count: 26
allele frequency: 5.052075237058915e-4
allele num: 51464
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-25_145-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-25_52-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-25_64-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-25_31-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-25_31-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-25_59-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-25_31-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-25_52-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-25_31-24dupAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-25_31-24dupAA
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

1-21307743-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
allele count: 32
allele frequency: 6.21793875330328e-4
allele num: 51464
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 2.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 1.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20716
  bin: 2.5e0
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 6
  allele frequency: 1.378043178686265e-3
  allele num: 4354
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 2.491280518186348e-4
  allele num: 4014
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 8
  allele frequency: 2.272727272727273e-3
  allele num: 3520
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 2.450980392156863e-3
  allele num: 408
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-21307743-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307742
    reference: chr 1
allele count: 16902
allele frequency: 3.284237525260376e-1
allele num: 51464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-24delA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-24delA
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 4624
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 1845
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 633
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 9777
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 5787
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 754
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 1792
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 1245
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.75e1
  variant carriers: 1088
num of homozygotes: 2
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: AT
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

1-21307743-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307741
    reference: chr 1
allele count: 292
allele frequency: 5.673869112389243e-3
allele num: 51464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-25_31-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-25_64-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-25_52-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-25_52-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-25_31-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-25_31-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-25_59-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-25_31-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-25_31-24delAA
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-25_145-24delAA
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 34
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: ATT
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-21307743-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307740
    reference: chr 1
allele count: 3
allele frequency: 5.829317581221825e-5
allele num: 51464
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20716
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3520
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.39703827884884e-4
  allele num: 7158
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.942907592701589e-4
  allele num: 3398
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4354
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
reference allele: ATTT
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-21307744-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307744
    reference: chr 1
allele count: 59
allele frequency: 9.10212897253934e-3
allele num: 6482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-24A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-24A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 1.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9502
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 26874
  bin: 2.5e0
  variant carriers: 27
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

1-21307745-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307745
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307745
    reference: chr 1
allele count: 9
allele frequency: 4.248489425981873e-4
allele num: 21184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-25A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-25A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13492
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-21307747-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307747
    reference: chr 1
allele count: 2
allele frequency: 2.606134841416695e-5
allele num: 76742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-27A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-27A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24080
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-21307747-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307747
    reference: chr 1
allele count: 1
allele frequency: 1.303067420708347e-5
allele num: 76742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-27A>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-27A>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24080
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-21307751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307751
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307751
    reference: chr 1
allele count: 1
allele frequency: 1.363735544403229e-5
allele num: 73328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-31A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-31A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24149
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

1-21307758-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307758
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307758
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 49228
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-38A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-38A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18547
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4749
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12700
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

1-21307763-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307763
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307761
    reference: chr 1
allele count: 64
allele frequency: 1.580403002765705e-3
allele num: 40496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-45_31-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-45_31-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-45_31-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-45_59-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-45_52-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-45_64-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-45_145-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-45_52-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-45_31-44delCT
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-45_31-44delCT
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17507
  bin: 1.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22575
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 9.75e1
  variant carriers: 89
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CAG
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-21307765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307765
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307765
    reference: chr 1
allele count: 1
allele frequency: 2.654350480437437e-5
allele num: 37674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-45C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-45C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3273
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

1-21307767-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307767
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307767
    reference: chr 1
allele count: 1
allele frequency: 2.868617326448652e-5
allele num: 34860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-47C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-47C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-21307768-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307768
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307768
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 33482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-48C>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-48C>A
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23800
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24753
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS

1-21307772-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307772
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307772
    reference: chr 1
allele count: 1
allele frequency: 3.43147347471004e-5
allele num: 29142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-52T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-52T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12055
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-21307777-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21307777
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21307777
    reference: chr 1
allele count: 1
allele frequency: 4.11793773678142e-5
allele num: 24284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.52-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.52-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-57T>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.59-57T>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6720
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-21308833-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21308833
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21308833
    reference: chr 1
allele count: 4
allele frequency: 3.407735559720566e-4
allele num: 11738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.51+48T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.58+48T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.51+48T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-1113T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-1113T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

1-21308844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21308844
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21308844
    reference: chr 1
allele count: 1
allele frequency: 8.484642796538266e-5
allele num: 11786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.51+37C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-1124C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.51+37C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.58+37C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-21308889-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21308889
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21308889
    reference: chr 1
allele count: 1
allele frequency: 8.318083513558476e-5
allele num: 12022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.43C>T
  hgvsp: ENSP00000473510.1:p.Pro15Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.50C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-1169C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.43C>T
  hgvsp: ENSP00000364073.3:p.Pro15Ser
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-1169C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro15Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-21308930-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21308930
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21308930
    reference: chr 1
allele count: 1
allele frequency: 8.358408559010364e-5
allele num: 11964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-29C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075151
  ensembl transcript: ENST00000476088
  gene symbol: EIF4G3
  hgvsc: ENST00000476088.1:n.9C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-1210C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-29C>G
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

1-21314765-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21314765
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21314765
    reference: chr 1
allele count: 59
allele frequency: 6.580414900736114e-3
allele num: 8966
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-5864A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-5864A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7045A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7045A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

1-21314829-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21314829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21314829
    reference: chr 1
allele count: 2
allele frequency: 2.244668911335578e-4
allele num: 8910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-5928T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000221808
  ensembl transcript: ENST00000408881
  gene symbol: MIR1256
  hgvsc: ENST00000408881.1:n.97T>C
  variant of: http://identifiers.org/hgnc/35321
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-5928T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7109T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7109T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-21314842-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21314842
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21314842
    reference: chr 1
allele count: 1
allele frequency: 1.136363636363636e-4
allele num: 8800
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-5941A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000221808
  ensembl transcript: ENST00000408881
  gene symbol: MIR1256
  hgvsc: ENST00000408881.1:n.84A>G
  variant of: http://identifiers.org/hgnc/35321
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7122A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-5941A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7122A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-21314929-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21314929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21314929
    reference: chr 1
allele count: 84
allele frequency: 1.12812248186946e-2
allele num: 7446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-6028G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-6028G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7209G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7209G>A
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-21314947-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21314947
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21314947
    reference: chr 1
allele count: 1
allele frequency: 1.429388221841052e-4
allele num: 6996
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.31-6046C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.31-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.31-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.31-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.31-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.145-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.31-6046C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.64-7227C>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.31-7227C>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-21324073-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21324073
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21324073
    reference: chr 1
allele count: 6
allele frequency: 3.4944670937682e-4
allele num: 17170
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+3619C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.63+21C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+5133C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

1-21324078-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21324078
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21324078
    reference: chr 1
allele count: 1
allele frequency: 5.819366852886406e-5
allele num: 17184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.63+16C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+3614C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+5128C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

1-21324095-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21324095
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21324095
    reference: chr 1
allele count: 1
allele frequency: 5.820044232336166e-5
allele num: 17182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+3597A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.62A>T
  hgvsp: ENSP00000349386.3:p.Gln21Leu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+5111A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln21Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-21324110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21324110
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21324110
    reference: chr 1
allele count: 1
allele frequency: 5.84932147870847e-5
allele num: 17096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.47G>A
  hgvsp: ENSP00000349386.3:p.Arg16Gln
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+3582G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+5096G>A
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg16Gln
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-21324118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21324118
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21324118
    reference: chr 1
allele count: 1
allele frequency: 5.875440658049354e-5
allele num: 17020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.39G>A
  hgvsp: ENST00000356916.3:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+3574G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+5088G>A
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala13Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

1-21325284-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325284
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325284
    reference: chr 1
allele count: 4
allele frequency: 3.379520108144643e-4
allele num: 11836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1158A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+2408A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3922A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-21325328-A-AAATTTGCATAGGTGAAAAAACTTTTTATTTTCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325328
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325361
    reference: chr 1
allele count: 1
allele frequency: 8.120838070488874e-5
allele num: 12314
alternate allele: AAATTTGCATAGGTGAAAAAACTTTTTATTTTCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-21325349-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325349
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325349
    reference: chr 1
allele count: 1
allele frequency: 8.038585209003216e-5
allele num: 12440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+2343A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1223A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3857A>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-21325360-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325360
    reference: chr 1
allele count: 4962
allele frequency: 3.825751734772552e-1
allele num: 12970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3846G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1234G>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+2332G>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.25e1
  variant carriers: 383
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 2.5e0
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.75e1
  variant carriers: 642
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 883
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.25e1
  variant carriers: 683
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.25e1
  variant carriers: 895
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.75e1
  variant carriers: 129
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 6.75e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.5e0
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 6.25e1
  variant carriers: 91
num of homozygotes: 937
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-21325367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325367
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325367
    reference: chr 1
allele count: 1
allele frequency: 8.389261744966443e-5
allele num: 11920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+2325T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1241T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3839T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-21325368-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325368
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325368
    reference: chr 1
allele count: 3
allele frequency: 2.525677723522478e-4
allele num: 11878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+2324A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1242A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3838A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-21325808-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325808
    reference: chr 1
allele count: 1
allele frequency: 9.697439875872769e-5
allele num: 10312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1682T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+1884T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3398T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

1-21325828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325828
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325828
    reference: chr 1
allele count: 147
allele frequency: 1.356088560885609e-2
allele num: 10840
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+1864C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1702C>T
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3378C>T
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 1.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 3
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

1-21325854-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21325854
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21325854
    reference: chr 1
allele count: 1
allele frequency: 8.837044892188053e-5
allele num: 11316
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+1838A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-1728A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+3352A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-21326250-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21326250
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21326250
    reference: chr 1
allele count: 9
allele frequency: 7.095553453169347e-4
allele num: 12684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.31-2124A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+1442A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+2956A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-21327642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327642
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327642
    reference: chr 1
allele count: 2
allele frequency: 1.160362032954282e-4
allele num: 17236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+50A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+1564A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

1-21327676-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327676
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327676
    reference: chr 1
allele count: 3
allele frequency: 1.723741668581935e-4
allele num: 17404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+16A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+1530A>G
  variant of: http://identifiers.org/hgnc/3298
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-21327687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327687
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327687
    reference: chr 1
allele count: 1
allele frequency: 5.73921028466483e-5
allele num: 17424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.144+5G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+1519G>A
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
hgvs: c.144+5G>A
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-21327693-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327693
    reference: chr 1
allele count: 1
allele frequency: 5.728689275893676e-5
allele num: 17456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.143T>C
  hgvsp: ENSP00000396083.1:p.Ile48Thr
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+1513T>C
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile48Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

1-21327717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327717
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327717
    reference: chr 1
allele count: 1
allele frequency: 5.699954400364797e-5
allele num: 17544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000396083
  ensembl transcript: ENST00000411888
  gene symbol: EIF4G3
  hgvsc: ENST00000411888.1:c.119G>A
  hgvsp: ENSP00000396083.1:p.Gly40Glu
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000349386
  ensembl transcript: ENST00000356916
  gene symbol: EIF4G3
  hgvsc: ENST00000356916.3:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364062
  ensembl transcript: ENST00000374927
  gene symbol: EIF4G3
  hgvsc: ENST00000374927.4:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000473510
  ensembl transcript: ENST00000602326
  gene symbol: EIF4G3
  hgvsc: ENST00000602326.1:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000383274
  ensembl transcript: ENST00000400422
  gene symbol: EIF4G3
  hgvsc: ENST00000400422.1:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000264211
  ensembl transcript: ENST00000264211
  gene symbol: EIF4G3
  hgvsc: ENST00000264211.8:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000395381
  ensembl transcript: ENST00000438975
  gene symbol: EIF4G3
  hgvsc: ENST00000438975.1:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364071
  ensembl transcript: ENST00000374935
  gene symbol: EIF4G3
  hgvsc: ENST00000374935.3:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075151
  ensembl protein: ENSP00000364073
  ensembl transcript: ENST00000374937
  gene symbol: EIF4G3
  hgvsc: ENST00000374937.3:c.30+1489G>A
  variant of: http://identifiers.org/hgnc/3298
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly40Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

1-21327736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21327736
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 21327736
    reference: chr 1
allele count: 1
allele frequency: 5.72737686139748e-5
allele num: 17460
alternate allele: T
canonical: false
consequence: missense
filter: PASS
hgvs: p.Val34Ile
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: 7.05e-1

FS
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InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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SIO_000300: 2.443728e6

MQRankSum
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ReadPosRankSum
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SIO_000300: -7.82e-1

QD
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SIO_000300: 1.308e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.77e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
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SIO_000300: -5.44e-1

ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.899e1

ClippingRankSum
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SIO_000300: -3.21e-1

InbreedingCoeff
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FS
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SIO_000300: 9.23e-1

QD
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DP
type: SiteQuality
SIO_000300: 2.443394e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.443321e6

MQRankSum
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQ
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SIO_000300: 5.948e1

QD
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VQSLOD
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FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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ReadPosRankSum
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FS
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MQ
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QD
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SIO_000300: 1.133e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
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VQSLOD
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 144
allele frequency: 1.665124884366328e-2
allele num: 8648
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
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Latino
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South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.440369e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e0

QD
type: SiteQuality
SIO_000300: 1.485e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36993
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.429374e6

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.485e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 2.12e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.218e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e0

FS
type: SiteQuality
SIO_000300: 4.611e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.784e1

DP
type: SiteQuality
SIO_000300: 2.429207e6

VQSLOD
type: SiteQuality
SIO_000300: -1.106e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeQuality
all individuals: 34056
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11802
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variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.380805e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

FS
type: SiteQuality
SIO_000300: 2.953e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

QD
type: SiteQuality
SIO_000300: 8.48e0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.81e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6635
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011594639361542e-5
allele num: 66410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.646e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.273e0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e-1

QD
type: SiteQuality
SIO_000300: 2.778e1

FS
type: SiteQuality
SIO_000300: 6.252e0

DP
type: SiteQuality
SIO_000300: 2.305618e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13372
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variant carriers: 0

GenotypeQuality
all individuals: 4015
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variant carriers: 0

GenotypeQuality
all individuals: 941
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variant carriers: 0

GenotypeQuality
all individuals: 4515
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 842
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 6031
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variant carriers: 0

GenotypeQuality
all individuals: 561
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GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 1219
bin: 9.75e1
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GenotypeQuality
all individuals: 957
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variant carriers: 0

GenotypeQuality
all individuals: 3720
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GenotypeQuality
all individuals: 835
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variant carriers: 0

GenotypeQuality
all individuals: 283
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variant carriers: 0

GenotypeQuality
all individuals: 21258
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 3.759e0

DP
type: SiteQuality
SIO_000300: 1.866577e6

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.232e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 1898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12830
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1289
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2797
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 1071
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GenotypeQuality
all individuals: 749
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
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GenotypeQuality
all individuals: 285
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2524
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.575795776867318e-4
allele num: 6346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.866e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.641e0

QD
type: SiteQuality
SIO_000300: 4.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

DP
type: SiteQuality
SIO_000300: 1.579844e6

FS
type: SiteQuality
SIO_000300: 9.218999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

GenotypeQuality
all individuals: 7716
bin: 3.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2255
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GenotypeQuality
all individuals: 1503
bin: 1.25e1
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GenotypeQuality
all individuals: 12397
bin: 2.25e1
variant carriers: 26

GenotypeQuality
all individuals: 5883
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variant carriers: 9

GenotypeQuality
all individuals: 2375
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variant carriers: 16

GenotypeQuality
all individuals: 1489
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GenotypeQuality
all individuals: 5465
bin: 2.75e1
variant carriers: 13

GenotypeQuality
all individuals: 306
bin: 8.75e1
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GenotypeQuality
all individuals: 2449
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 501
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GenotypeQuality
all individuals: 7331
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2039
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variant carriers: 4

GenotypeQuality
all individuals: 1911
bin: 1.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1279
bin: 5.75e1
variant carriers: 8

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.367003367003367e-4
allele num: 5940
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.892751915144372e-4
allele num: 6788
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.275510204081633e-3
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 6.521813750729413e-4
allele num: 58266
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.45623998835008e-3
allele num: 13734
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.87757909215956e-4
allele num: 8724
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 9.55211207811505e-4
allele num: 9422
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

QD
type: SiteQuality
SIO_000300: 4.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.448929e6

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 6.033e1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
all individuals: 12397
bin: 2.25e1
variant carriers: 134

GenotypeQuality
all individuals: 7716
bin: 3.25e1
variant carriers: 128

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 50

GenotypeQuality
all individuals: 7331
bin: 6.25e1
variant carriers: 79

GenotypeQuality
all individuals: 5883
bin: 3.75e1
variant carriers: 120

GenotypeQuality
all individuals: 2255
bin: 7.5e0
variant carriers: 158

GenotypeQuality
all individuals: 1503
bin: 1.25e1
variant carriers: 147

GenotypeQuality
all individuals: 5465
bin: 2.75e1
variant carriers: 142

GenotypeQuality
all individuals: 2271
bin: 4.75e1
variant carriers: 109

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 59

GenotypeQuality
all individuals: 713
bin: 7.75e1
variant carriers: 82

GenotypeQuality
all individuals: 1279
bin: 5.75e1
variant carriers: 93

GenotypeQuality
all individuals: 1726
bin: 5.25e1
variant carriers: 86

GenotypeQuality
all individuals: 599
bin: 7.25e1
variant carriers: 66

GenotypeQuality
all individuals: 1489
bin: 6.75e1
variant carriers: 75

GenotypeQuality
all individuals: 306
bin: 8.75e1
variant carriers: 63

East Asian
type: Population
allele count: 479
allele frequency: 7.056570418385386e-2
allele num: 6788
num of homozygotes: 17

Other
type: Population
allele count: 17
allele frequency: 2.168367346938775e-2
allele num: 784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 118
allele frequency: 1.986531986531986e-2
allele num: 5940
num of homozygotes: 1

African
type: Population
allele count: 16
allele frequency: 1.834021091242549e-3
allele num: 8724
num of homozygotes: 0

Latino
type: Population
allele count: 684
allele frequency: 7.259605179367438e-2
allele num: 9422
num of homozygotes: 18

South Asian
type: Population
allele count: 389
allele frequency: 2.832386777340906e-2
allele num: 13734
num of homozygotes: 6

European (Non-Finnish)
type: Population
allele count: 339
allele frequency: 5.81814437236124e-3
allele num: 58266
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 6.033e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

QD
type: SiteQuality
SIO_000300: 4.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.03e-2

DP
type: SiteQuality
SIO_000300: 1.448929e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1717
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5568
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 480
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.661681621801263e-4
allele num: 6018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 3.0e0

DP
type: SiteQuality
SIO_000300: 1.343475e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQ
type: SiteQuality
SIO_000300: 6.058e1

VQSLOD
type: SiteQuality
SIO_000300: -2.637e0

GenotypeQuality
all individuals: 946
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 897
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8485
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5768
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9506
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6503
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626069140459853e-5
allele num: 61498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.43837e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeQuality
all individuals: 1903
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6000
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 7060
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9283
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2664
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.12677870066319e-4
allele num: 62124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 4.94179661761476e-3
allele num: 9106
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.773584905660377e-4
allele num: 10600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.152e1

DP
type: SiteQuality
SIO_000300: 1.398012e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

GenotypeQuality
all individuals: 1398
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5992
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3821
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11685
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2743
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69606512890095e-5
allele num: 58960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7048
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.348973e6

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 3.61e0

VQSLOD
type: SiteQuality
SIO_000300: -2.245e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 6.134e1

GenotypeQuality
all individuals: 440
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 4129
bin: 4.75e1
variant carriers: 32

GenotypeQuality
all individuals: 3344
bin: 2.5e0
variant carriers: 81

GenotypeQuality
all individuals: 5317
bin: 2.75e1
variant carriers: 34

GenotypeQuality
all individuals: 9545
bin: 2.25e1
variant carriers: 65

GenotypeQuality
all individuals: 3905
bin: 1.75e1
variant carriers: 87

GenotypeQuality
all individuals: 3175
bin: 4.25e1
variant carriers: 31

GenotypeQuality
all individuals: 8124
bin: 3.25e1
variant carriers: 58

GenotypeQuality
all individuals: 1158
bin: 5.75e1
variant carriers: 14

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2913
bin: 5.25e1
variant carriers: 21

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2309
bin: 6.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1165
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 6957
bin: 3.75e1
variant carriers: 28

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 7

Latino
type: Population
allele count: 78
allele frequency: 9.803921568627451e-3
allele num: 7956
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.717391304347826e-3
allele num: 736
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.863987635239567e-4
allele num: 7764
num of homozygotes: 0

East Asian
type: Population
allele count: 151
allele frequency: 2.440206851971558e-2
allele num: 6188
num of homozygotes: 0

South Asian
type: Population
allele count: 53
allele frequency: 3.927671557729362e-3
allele num: 13494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.182832037850625e-3
allele num: 5918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 6.195321593511809e-4
allele num: 53266
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.479e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

FS
type: SiteQuality
SIO_000300: 2.387e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

QD
type: SiteQuality
SIO_000300: 9.6e-1

MQ
type: SiteQuality
SIO_000300: 6.203e1

DP
type: SiteQuality
SIO_000300: 1.328089e6

GenotypeQuality
all individuals: 3175
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 9545
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6957
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3905
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1318
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.232062055591467e-4
allele num: 6188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.63211053955619e-5
allele num: 53266
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

QD
type: SiteQuality
SIO_000300: 9.6e-1

MQ
type: SiteQuality
SIO_000300: 6.203e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.387e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.479e-1

DP
type: SiteQuality
SIO_000300: 1.328089e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 2322
bin: 1.75e1
variant carriers: 239

GenotypeQuality
all individuals: 893
bin: 8.25e1
variant carriers: 79

GenotypeQuality
all individuals: 3856
bin: 2.25e1
variant carriers: 248

GenotypeQuality
all individuals: 1203
bin: 7.75e1
variant carriers: 104

GenotypeQuality
all individuals: 1604
bin: 6.25e1
variant carriers: 158

GenotypeQuality
all individuals: 2627
bin: 3.25e1
variant carriers: 304

GenotypeQuality
all individuals: 2246
bin: 4.25e1
variant carriers: 313

GenotypeQuality
all individuals: 2305
bin: 4.75e1
variant carriers: 294

GenotypeQuality
all individuals: 2104
bin: 5.75e1
variant carriers: 185

GenotypeQuality
all individuals: 797
bin: 8.75e1
variant carriers: 88

GenotypeQuality
all individuals: 1460
bin: 7.25e1
variant carriers: 126

GenotypeQuality
all individuals: 2304
bin: 3.75e1
variant carriers: 293

GenotypeQuality
all individuals: 2481
bin: 2.75e1
variant carriers: 283

GenotypeQuality
all individuals: 2209
bin: 5.25e1
variant carriers: 254

GenotypeQuality
all individuals: 1514
bin: 6.75e1
variant carriers: 167

GenotypeQuality
all individuals: 2907
bin: 9.75e1
variant carriers: 336

Other
type: Population
allele count: 16
allele frequency: 3.92156862745098e-2
allele num: 408
num of homozygotes: 0

East Asian
type: Population
allele count: 49
allele frequency: 1.392045454545454e-2
allele num: 3520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 196
allele frequency: 5.768098881695115e-2
allele num: 3398
num of homozygotes: 0

African
type: Population
allele count: 357
allele frequency: 8.893871449925261e-2
allele num: 4014
num of homozygotes: 0

Latino
type: Population
allele count: 121
allele frequency: 2.779053743683969e-2
allele num: 4354
num of homozygotes: 0

South Asian
type: Population
allele count: 306
allele frequency: 4.274937133277452e-2
allele num: 7158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1425
allele frequency: 4.980427792534601e-2
allele num: 28612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 9.61897e5

QD
type: SiteQuality
SIO_000300: 3.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 2627
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 797
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1203
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20716
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3354
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 2382
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2209
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2481
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2304
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2305
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2907
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1460
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 3856
bin: 2.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.885815185403178e-4
allele num: 3398
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.39703827884884e-4
allele num: 7158
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.840909090909091e-4
allele num: 3520
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 9.965122072745391e-4
allele num: 4014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 6.291066685306865e-4
allele num: 28612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 9.61897e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 11
allele frequency: 1.536742106733725e-3
allele num: 7158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.942907592701589e-4
allele num: 3398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.398014818957081e-4
allele num: 28612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.61897e5

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

QD
type: SiteQuality
SIO_000300: 3.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 2304
bin: 3.75e1
variant carriers: 1390

GenotypeQuality
all individuals: 797
bin: 8.75e1
variant carriers: 667

GenotypeQuality
all individuals: 2627
bin: 3.25e1
variant carriers: 1385

GenotypeQuality
all individuals: 1460
bin: 7.25e1
variant carriers: 1253

GenotypeQuality
all individuals: 1604
bin: 6.25e1
variant carriers: 1280

GenotypeQuality
all individuals: 20716
bin: 2.5e0
variant carriers: 465

GenotypeQuality
all individuals: 3354
bin: 7.5e0
variant carriers: 693

GenotypeQuality
all individuals: 3856
bin: 2.25e1
variant carriers: 929

GenotypeQuality
all individuals: 2907
bin: 9.75e1
variant carriers: 2504

GenotypeQuality
all individuals: 2322
bin: 1.75e1
variant carriers: 836

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 658

GenotypeQuality
all individuals: 2382
bin: 1.25e1
variant carriers: 712

GenotypeQuality
all individuals: 2246
bin: 4.25e1
variant carriers: 1568

GenotypeQuality
all individuals: 2305
bin: 4.75e1
variant carriers: 1711

GenotypeQuality
all individuals: 2209
bin: 5.25e1
variant carriers: 1755

GenotypeQuality
all individuals: 1203
bin: 7.75e1
variant carriers: 1032

African
type: Population
allele count: 1156
allele frequency: 2.879920279023418e-1
allele num: 4014
num of homozygotes: 2

East Asian
type: Population
allele count: 1026
allele frequency: 2.914772727272728e-1
allele num: 3520
num of homozygotes: 0

Latino
type: Population
allele count: 1434
allele frequency: 3.293523197060175e-1
allele num: 4354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9711
allele frequency: 3.394030476723053e-1
allele num: 28612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 994
allele frequency: 2.92525014714538e-1
allele num: 3398
num of homozygotes: 0

South Asian
type: Population
allele count: 2451
allele frequency: 3.424140821458508e-1
allele num: 7158
num of homozygotes: 0

Other
type: Population
allele count: 130
allele frequency: 3.186274509803921e-1
allele num: 408
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 9.61897e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

GenotypeQuality
all individuals: 2481
bin: 2.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2322
bin: 1.75e1
variant carriers: 25

GenotypeQuality
all individuals: 797
bin: 8.75e1
variant carriers: 18

GenotypeQuality
all individuals: 2382
bin: 1.25e1
variant carriers: 30

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1604
bin: 6.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2246
bin: 4.25e1
variant carriers: 22

GenotypeQuality
all individuals: 2304
bin: 3.75e1
variant carriers: 22

GenotypeQuality
all individuals: 20716
bin: 2.5e0
variant carriers: 47

GenotypeQuality
all individuals: 3856
bin: 2.25e1
variant carriers: 34

GenotypeQuality
all individuals: 2305
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 2907
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 2627
bin: 3.25e1
variant carriers: 21

GenotypeQuality
all individuals: 2209
bin: 5.25e1
variant carriers: 31

GenotypeQuality
all individuals: 1460
bin: 7.25e1
variant carriers: 30

GenotypeQuality
all individuals: 893
bin: 8.25e1
variant carriers: 32

African
type: Population
allele count: 15
allele frequency: 3.736920777279521e-3
allele num: 4014
num of homozygotes: 0

South Asian
type: Population
allele count: 79
allele frequency: 1.103660240290584e-2
allele num: 7158
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 3.977272727272727e-3
allele num: 3520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 142
allele frequency: 4.962952607297637e-3
allele num: 28612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 2.64861683343143e-3
allele num: 3398
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 6.430868167202572e-3
allele num: 4354
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 1.225490196078431e-2
allele num: 408
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 9.61897e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

QD
type: SiteQuality
SIO_000300: 3.42e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.495037047392702e-5
allele num: 28612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

QD
type: SiteQuality
SIO_000300: 3.42e0

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.61897e5

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 732
bin: 1.75e1
variant carriers: 13

GenotypeQuality
all individuals: 85
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 776
bin: 1.25e1
variant carriers: 24

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 264
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2257
bin: 7.5e0
variant carriers: 30

GenotypeQuality
all individuals: 58
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 186
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1496
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 126
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 1.111111111111111e-2
allele num: 450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.597014925373134e-3
allele num: 536
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.239669421487603e-2
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 1.598173515981735e-2
allele num: 876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 2.04778156996587e-2
allele num: 586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 5.437893531768746e-3
allele num: 3494
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.396e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.515e-1

DP
type: SiteQuality
SIO_000300: 6.20495e5

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

GenotypeQuality
all individuals: 2212
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 119
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2181
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 349
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35606
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 504
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 850
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5253
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 168
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9237
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 41
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1888
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.329787234042553e-3
allele num: 2256
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.5625e-3
allele num: 1280
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.072194424588992e-3
allele num: 2798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1358
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 4.385e0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.878e-1

MQ
type: SiteQuality
SIO_000300: 6.002e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.4e-1

DP
type: SiteQuality
SIO_000300: 1.131119e6

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2924
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7024
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.376087059829872e-5
allele num: 42086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.927525057825752e-4
allele num: 5188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

DP
type: SiteQuality
SIO_000300: 7.85584e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

QD
type: SiteQuality
SIO_000300: 8.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35839
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7024
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2924
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.927525057825752e-4
allele num: 5188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.06e-1

DP
type: SiteQuality
SIO_000300: 7.85584e5

QD
type: SiteQuality
SIO_000300: 8.19e0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3700
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35669
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3000
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10692
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.229e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.504e0

QD
type: SiteQuality
SIO_000300: 1.465e1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.53e-2

DP
type: SiteQuality
SIO_000300: 7.35715e5

VQSLOD
type: SiteQuality
SIO_000300: -6.985e-1

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 2896
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3174
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.23574e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 4.3e0

VQSLOD
type: SiteQuality
SIO_000300: -3.351e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.12e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 3

Latino
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allele count: 4
allele frequency: 1.268230818008878e-3
allele num: 3154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

African
type: Population
allele count: 54
allele frequency: 1.616766467065868e-2
allele num: 3340
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.334875856545341e-4
allele num: 22474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2974
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.941176470588235e-3
allele num: 340
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.549875754348598e-4
allele num: 5634
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.08e-2

DP
type: SiteQuality
SIO_000300: 5.11477e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.626e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.945e0

VQSLOD
type: SiteQuality
SIO_000300: 6.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.770537162484496e-5
allele num: 20962
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.614e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

QD
type: SiteQuality
SIO_000300: 2.688e1

DP
type: SiteQuality
SIO_000300: 4.91851e5

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.55e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 71
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.13663447709061e-5
allele num: 19468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.75969e5

VQSLOD
type: SiteQuality
SIO_000300: -4.127e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

GenotypeQuality
all individuals: 912
bin: 6.25e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2052
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MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 4.6818e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.87e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.97e0

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.41014e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.11e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.212e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.254788160185723e-5
allele num: 13784
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3316
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2010
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
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MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.41e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 4.15239e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 604
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3438
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.415162454873646e-3
allele num: 554
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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South Asian
type: Population
allele count: 1
allele frequency: 1.38121546961326e-4
allele num: 7240
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
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FS
type: SiteQuality
SIO_000300: 2.578e0

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

DP
type: SiteQuality
SIO_000300: 1.31422e5

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.297e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 2.25e1
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GenotypeQuality
all individuals: 63
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1534
bin: 7.5e0
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GenotypeQuality
all individuals: 271
bin: 4.75e1
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GenotypeQuality
all individuals: 44
bin: 1.25e1
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GenotypeQuality
all individuals: 496
bin: 2.5e0
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GenotypeQuality
all individuals: 177
bin: 2.75e1
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GenotypeQuality
all individuals: 3013
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.37438152831226e-4
allele num: 7276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3450
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.217e0

FS
type: SiteQuality
SIO_000300: 1.875e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

QD
type: SiteQuality
SIO_000300: 1.118e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.37383e5

VQSLOD
type: SiteQuality
SIO_000300: 4.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.25e1
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GenotypeQuality
all individuals: 223
bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.805054151624549e-3
allele num: 554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.928e0

DP
type: SiteQuality
SIO_000300: 1.50327e5

QD
type: SiteQuality
SIO_000300: 9.94e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

MQ
type: SiteQuality
SIO_000300: 5.869e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.349892008639309e-4
allele num: 7408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.843e0

MQ
type: SiteQuality
SIO_000300: 5.753e1

DP
type: SiteQuality
SIO_000300: 1.40565e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.31e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.48e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 2779
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 9.60530911631156e-3
allele num: 5726
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.225806451612903e-3
allele num: 310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.547987616099071e-3
allele num: 1938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.712e0

DP
type: SiteQuality
SIO_000300: 1.32069e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.14e-2

QD
type: SiteQuality
SIO_000300: 1.342e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 5.78e0

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 2972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.040582726326743e-3
allele num: 1922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 3.558e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.77e-2

QD
type: SiteQuality
SIO_000300: 1.335e1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 1.29853e5

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 2884
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 5.279831045406547e-4
allele num: 1894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.8437e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.68e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.95e-1

DP
type: SiteQuality
SIO_000300: 1.28506e5

VQSLOD
type: SiteQuality
SIO_000300: -2.843e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

QD
type: SiteQuality
SIO_000300: 1.487e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 70
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 43
bin: 5.75e1
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GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
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GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 6.25e1
variant carriers: 1

African
type: Population
allele count: 4
allele frequency: 2.538071065989848e-3
allele num: 1576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.385964912280702e-3
allele num: 228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 78
allele frequency: 1.622971285892634e-2
allele num: 4806
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 3.125e-3
allele num: 320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

DP
type: SiteQuality
SIO_000300: 1.05778e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

GenotypeQuality
all individuals: 1386
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
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GenotypeQuality
all individuals: 139
bin: 9.75e1
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GenotypeQuality
all individuals: 1352
bin: 2.25e1
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GenotypeQuality
all individuals: 198
bin: 3.25e1
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.25e1
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GenotypeQuality
all individuals: 47
bin: 9.25e1
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GenotypeQuality
all individuals: 285
bin: 6.75e1
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GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.830601092896175e-4
allele num: 1464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.165e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.015e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.345e0

DP
type: SiteQuality
SIO_000300: 8.9808e4

FS
type: SiteQuality
SIO_000300: 8.257999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

QD
type: SiteQuality
SIO_000300: 9.15e0

GenotypeQuality
all individuals: 4934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
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GenotypeQuality
all individuals: 477
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GenotypeQuality
all individuals: 13
bin: 4.75e1
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GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 297
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GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 124
bin: 8.75e1
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GenotypeQuality
all individuals: 89
bin: 1.75e1
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GenotypeQuality
all individuals: 623
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 7.826767545003914e-4
allele num: 7666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e0

DP
type: SiteQuality
SIO_000300: 2.61726e5

QD
type: SiteQuality
SIO_000300: 8.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 6.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 617
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.304461257500652e-4
allele num: 7666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.61657e5

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.099e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

FS
type: SiteQuality
SIO_000300: 6.527e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

VQSLOD
type: SiteQuality
SIO_000300: -1.839e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.701837985023826e-4
allele num: 5876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.184e0

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: -1.057e0

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 2.61564e5

MQ
type: SiteQuality
SIO_000300: 5.872e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.066115702479339e-3
allele num: 484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

QD
type: SiteQuality
SIO_000300: 8.68e0

FS
type: SiteQuality
SIO_000300: 3.164e0

VQSLOD
type: SiteQuality
SIO_000300: -3.344e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.426e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 2.58442e5

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 122
bin: 9.25e1
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GenotypeQuality
all individuals: 81
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1022
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313370107696349e-4
allele num: 7614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 2.55666e5

VQSLOD
type: SiteQuality
SIO_000300: -1.064e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -1.694e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.09e0

GenotypeQuality
all individuals: 740
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.57331655129012e-4
allele num: 6356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1058
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.474452554744526e-3
allele num: 548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

FS
type: SiteQuality
SIO_000300: 1.126e0

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

DP
type: SiteQuality
SIO_000300: 1.33085e5

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.68e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

QD
type: SiteQuality
SIO_000300: 1.566e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.497005988023952e-4
allele num: 6680
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.945e0

FS
type: SiteQuality
SIO_000300: 2.061e1

DP
type: SiteQuality
SIO_000300: 1.55061e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.292e0

QD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 805
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GenotypeQuality
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bin: 8.75e1
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.555555555555556e-3
allele num: 180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3468
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -2.648e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

DP
type: SiteQuality
SIO_000300: 1.54251e5

QD
type: SiteQuality
SIO_000300: 2.861e1

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 83

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 47

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 80

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 72

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2896

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 131

GenotypeQuality
all individuals: 107
bin: 7.25e1
variant carriers: 66

Other
type: Population
allele count: 66
allele frequency: 4.074074074074074e-1
allele num: 162
num of homozygotes: 11

European (Non-Finnish)
type: Population
allele count: 1448
allele frequency: 4.046953605366126e-1
allele num: 3578
num of homozygotes: 285

European (Finnish)
type: Population
allele count: 571
allele frequency: 4.612277867528272e-1
allele num: 1238
num of homozygotes: 112

East Asian
type: Population
allele count: 43
allele frequency: 2.171717171717172e-1
allele num: 198
num of homozygotes: 5

Latino
type: Population
allele count: 61
allele frequency: 3.351648351648351e-1
allele num: 182
num of homozygotes: 12

African
type: Population
allele count: 158
allele frequency: 2.883211678832117e-1
allele num: 548
num of homozygotes: 20

South Asian
type: Population
allele count: 2615
allele frequency: 3.701868629671574e-1
allele num: 7064
num of homozygotes: 492

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.781e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.73e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

FS
type: SiteQuality
SIO_000300: 1.899e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

QD
type: SiteQuality
SIO_000300: 1.492e1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 1.64035e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 708
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 6.75e1
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GenotypeQuality
all individuals: 350
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.541307028360049e-4
allele num: 6488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1028
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.833e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 1.34751e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.84e-1

QD
type: SiteQuality
SIO_000300: 1.98e1

GenotypeQuality
all individuals: 573
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.631058968817536e-4
allele num: 6478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3308
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

QD
type: SiteQuality
SIO_000300: 1.509e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.52e-1

DP
type: SiteQuality
SIO_000300: 1.32883e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 620
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.019323671497584e-4
allele num: 3312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.66522e5

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.0e0

FS
type: SiteQuality
SIO_000300: 9.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

QD
type: SiteQuality
SIO_000300: 1.474e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.92e-1

GenotypeQuality
all individuals: 1195
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2165
bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 54
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1110
bin: 9.75e1
variant carriers: 127

GenotypeQuality
all individuals: 436
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2802
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.333333333333333e-2
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.233045622688039e-3
allele num: 1622
num of homozygotes: 0

South Asian
type: Population
allele count: 140
allele frequency: 3.019844693701467e-2
allele num: 4636
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.736167734420501e-4
allele num: 3434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.81309e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2990
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 987
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variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.470588235294118e-3
allele num: 680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.26e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

FS
type: SiteQuality
SIO_000300: 1.603e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 1.86456e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.618705035971223e-2
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.88e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 8.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

DP
type: SiteQuality
SIO_000300: 2.33894e5

GenotypeQuality
all individuals: 891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 2.5e0
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GenotypeQuality
all individuals: 925
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 201
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GenotypeQuality
all individuals: 469
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GenotypeQuality
all individuals: 2488
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 534
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variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.630194634402946e-4
allele num: 7604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.27916e5

ClippingRankSum
type: SiteQuality
SIO_000300: 9.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.291e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
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GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
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GenotypeQuality
all individuals: 65
bin: 3.25e1
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GenotypeQuality
all individuals: 969
bin: 7.5e0
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GenotypeQuality
all individuals: 41
bin: 1.25e1
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GenotypeQuality
all individuals: 2500
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1095
bin: 6.75e1
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GenotypeQuality
all individuals: 2741
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.668891855807744e-4
allele num: 5992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.612330198537095e-4
allele num: 7656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.304e1

DP
type: SiteQuality
SIO_000300: 3.43522e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

FS
type: SiteQuality
SIO_000300: 6.925e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1095
bin: 6.75e1
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GenotypeQuality
all individuals: 44
bin: 1.25e1
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GenotypeQuality
all individuals: 587
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
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variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
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GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.745e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.815e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.393e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 3.4416e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.619e1

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.657275439177991e-4
allele num: 6034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1110
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.445e0

DP
type: SiteQuality
SIO_000300: 3.44346e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

QD
type: SiteQuality
SIO_000300: 7.05e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: -1.166e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.311258278145695e-3
allele num: 302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.533e0

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.868e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

DP
type: SiteQuality
SIO_000300: 3.45776e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1