3-196792196-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792196
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792196
    reference: chr 3
allele count: 24
allele frequency: 1.981767736821245e-4
allele num: 121104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2258A>G
  hgvsp: ENSP00000376187.2:p.Asn753Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2204A>G
  hgvsp: ENSP00000413238.1:p.Asn735Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2357A>G
  hgvsp: ENSP00000407531.1:p.Asn786Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2324A>G
  hgvsp: ENSP00000411278.1:p.Asn775Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2357A>G
  hgvsp: ENSP00000391732.2:p.Asn786Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2423A>G
  hgvsp: ENSP00000345731.2:p.Asn808Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.613A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2045A>G
  hgvsp: ENSP00000396658.1:p.Asn682Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.2009A>G
  hgvsp: ENSP00000398939.1:p.Asn670Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2204A>G
  hgvsp: ENSP00000321087.3:p.Asn735Ser
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2098A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2324A>G
  hgvsp: ENSP00000350303.4:p.Asn775Ser
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn808Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

3-196792217-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792217
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792217
    reference: chr 3
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2336T>C
  hgvsp: ENSP00000407531.1:p.Ile779Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2183T>C
  hgvsp: ENSP00000413238.1:p.Ile728Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2024T>C
  hgvsp: ENSP00000396658.1:p.Ile675Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2303T>C
  hgvsp: ENSP00000411278.1:p.Ile768Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2183T>C
  hgvsp: ENSP00000321087.3:p.Ile728Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1988T>C
  hgvsp: ENSP00000398939.1:p.Ile663Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2402T>C
  hgvsp: ENSP00000345731.2:p.Ile801Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.592T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2336T>C
  hgvsp: ENSP00000391732.2:p.Ile779Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2237T>C
  hgvsp: ENSP00000376187.2:p.Ile746Thr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2077T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2303T>C
  hgvsp: ENSP00000350303.4:p.Ile768Thr
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile801Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

3-196792218-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792218
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792218
    reference: chr 3
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2182A>C
  hgvsp: ENSP00000413238.1:p.Ile728Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2023A>C
  hgvsp: ENSP00000396658.1:p.Ile675Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1987A>C
  hgvsp: ENSP00000398939.1:p.Ile663Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2182A>C
  hgvsp: ENSP00000321087.3:p.Ile728Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2335A>C
  hgvsp: ENSP00000407531.1:p.Ile779Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2236A>C
  hgvsp: ENSP00000376187.2:p.Ile746Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2302A>C
  hgvsp: ENSP00000411278.1:p.Ile768Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2302A>C
  hgvsp: ENSP00000350303.4:p.Ile768Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2401A>C
  hgvsp: ENSP00000345731.2:p.Ile801Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.591A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2076A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2335A>C
  hgvsp: ENSP00000391732.2:p.Ile779Leu
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile801Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

3-196792224-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792224
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792224
    reference: chr 3
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2230A>G
  hgvsp: ENSP00000376187.2:p.Lys744Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1981A>G
  hgvsp: ENSP00000398939.1:p.Lys661Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2296A>G
  hgvsp: ENSP00000411278.1:p.Lys766Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2329A>G
  hgvsp: ENSP00000407531.1:p.Lys777Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2296A>G
  hgvsp: ENSP00000350303.4:p.Lys766Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2070A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2329A>G
  hgvsp: ENSP00000391732.2:p.Lys777Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2176A>G
  hgvsp: ENSP00000321087.3:p.Lys726Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2176A>G
  hgvsp: ENSP00000413238.1:p.Lys726Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2395A>G
  hgvsp: ENSP00000345731.2:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.585A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2017A>G
  hgvsp: ENSP00000396658.1:p.Lys673Glu
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys799Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

3-196792232-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792232
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792232
    reference: chr 3
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2288A>G
  hgvsp: ENSP00000411278.1:p.Gln763Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2168A>G
  hgvsp: ENSP00000413238.1:p.Gln723Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.577A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2321A>G
  hgvsp: ENSP00000391732.2:p.Gln774Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2222A>G
  hgvsp: ENSP00000376187.2:p.Gln741Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2009A>G
  hgvsp: ENSP00000396658.1:p.Gln670Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2387A>G
  hgvsp: ENSP00000345731.2:p.Gln796Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2321A>G
  hgvsp: ENSP00000407531.1:p.Gln774Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2288A>G
  hgvsp: ENSP00000350303.4:p.Gln763Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2062A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1973A>G
  hgvsp: ENSP00000398939.1:p.Gln658Arg
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2168A>G
  hgvsp: ENSP00000321087.3:p.Gln723Arg
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln796Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-196792234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792234
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792234
    reference: chr 3
allele count: 13
allele frequency: 1.071793687959635e-4
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2286C>T
  hgvsp: ENST00000450955.1:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2007C>T
  hgvsp: ENST00000443183.1:c.2007C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.575C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1971C>T
  hgvsp: ENST00000452595.1:c.1971C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2286C>T
  hgvsp: ENST00000357674.4:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2319C>T
  hgvsp: ENST00000419354.1:c.2319C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2385C>T
  hgvsp: ENST00000346964.2:c.2385C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2220C>T
  hgvsp: ENST00000392382.2:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2319C>T
  hgvsp: ENST00000448528.2:c.2319C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2166C>T
  hgvsp: ENST00000314062.3:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2166C>T
  hgvsp: ENST00000422288.1:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2060C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15020
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile795Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-196792239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792239
    reference: chr 3
allele count: 11
allele frequency: 9.069472156720479e-5
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2314G>A
  hgvsp: ENSP00000391732.2:p.Asp772Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2161G>A
  hgvsp: ENSP00000413238.1:p.Asp721Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2161G>A
  hgvsp: ENSP00000321087.3:p.Asp721Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2215G>A
  hgvsp: ENSP00000376187.2:p.Asp739Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.570G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2055G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.2002G>A
  hgvsp: ENSP00000396658.1:p.Asp668Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2281G>A
  hgvsp: ENSP00000411278.1:p.Asp761Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2281G>A
  hgvsp: ENSP00000350303.4:p.Asp761Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2314G>A
  hgvsp: ENSP00000407531.1:p.Asp772Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1966G>A
  hgvsp: ENSP00000398939.1:p.Asp656Asn
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2380G>A
  hgvsp: ENSP00000345731.2:p.Asp794Asn
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp794Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

3-196792266-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792266
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792266
    reference: chr 3
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1939G>C
  hgvsp: ENSP00000398939.1:p.Val647Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2353G>C
  hgvsp: ENSP00000345731.2:p.Val785Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2287G>C
  hgvsp: ENSP00000407531.1:p.Val763Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2188G>C
  hgvsp: ENSP00000376187.2:p.Val730Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1975G>C
  hgvsp: ENSP00000396658.1:p.Val659Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2134G>C
  hgvsp: ENSP00000413238.1:p.Val712Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2287G>C
  hgvsp: ENSP00000391732.2:p.Val763Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.543G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2254G>C
  hgvsp: ENSP00000411278.1:p.Val752Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2028G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2254G>C
  hgvsp: ENSP00000350303.4:p.Val752Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2134G>C
  hgvsp: ENSP00000321087.3:p.Val712Leu
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val785Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS

3-196792270-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792270
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792270
    reference: chr 3
allele count: 2
allele frequency: 1.651145895251304e-5
allele num: 121128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2130T>C
  hgvsp: ENST00000314062.3:c.2130T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2184T>C
  hgvsp: ENST00000392382.2:c.2184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2283T>C
  hgvsp: ENST00000419354.1:c.2283T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2283T>C
  hgvsp: ENST00000448528.2:c.2283T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2349T>C
  hgvsp: ENST00000346964.2:c.2349T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2130T>C
  hgvsp: ENST00000422288.1:c.2130T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.539T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2250T>C
  hgvsp: ENST00000450955.1:c.2250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2250T>C
  hgvsp: ENST00000357674.4:c.2250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1935T>C
  hgvsp: ENST00000452595.1:c.1935T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1971T>C
  hgvsp: ENST00000443183.1:c.1971T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2024T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His783His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

3-196792277-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792277
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792277
    reference: chr 3
allele count: 1
allele frequency: 8.272530236098013e-6
allele num: 120882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.2017A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2276A>T
  hgvsp: ENSP00000391732.2:p.Asp759Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2177A>T
  hgvsp: ENSP00000376187.2:p.Asp726Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1964A>T
  hgvsp: ENSP00000396658.1:p.Asp655Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2243A>T
  hgvsp: ENSP00000411278.1:p.Asp748Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2243A>T
  hgvsp: ENSP00000350303.4:p.Asp748Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2123A>T
  hgvsp: ENSP00000321087.3:p.Asp708Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.532A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2342A>T
  hgvsp: ENSP00000345731.2:p.Asp781Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2276A>T
  hgvsp: ENSP00000407531.1:p.Asp759Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2123A>T
  hgvsp: ENSP00000413238.1:p.Asp708Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1928A>T
  hgvsp: ENSP00000398939.1:p.Asp643Val
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp781Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

3-196792297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792297
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792297
    reference: chr 3
allele count: 1
allele frequency: 8.33694600993764e-6
allele num: 119948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2223T>C
  hgvsp: ENST00000357674.4:c.2223T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2103T>C
  hgvsp: ENST00000422288.1:c.2103T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.512T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2256T>C
  hgvsp: ENST00000419354.1:c.2256T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2157T>C
  hgvsp: ENST00000392382.2:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1997T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2223T>C
  hgvsp: ENST00000450955.1:c.2223T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1908T>C
  hgvsp: ENST00000452595.1:c.1908T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2256T>C
  hgvsp: ENST00000448528.2:c.2256T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1944T>C
  hgvsp: ENST00000443183.1:c.1944T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2103T>C
  hgvsp: ENST00000314062.3:c.2103T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2322T>C
  hgvsp: ENST00000346964.2:c.2322T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp774Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-196792322-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792322
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792322
    reference: chr 3
allele count: 1
allele frequency: 8.468978133098461e-6
allele num: 118078
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.487A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-3A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-3A>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2300-3A>C
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-196792336-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792336
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792336
    reference: chr 3
allele count: 1
allele frequency: 8.590327291469806e-6
allele num: 116410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.473G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-17G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-17G>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

3-196792336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792336
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792336
    reference: chr 3
allele count: 1
allele frequency: 8.590327291469806e-6
allele num: 116410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.473G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-17G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-17G>A
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

3-196792342-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792342
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792342
    reference: chr 3
allele count: 2
allele frequency: 1.739917179942235e-5
allele num: 114948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.467T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-23T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-23T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

3-196792345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792345
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792345
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 114468
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.464C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-26C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-26C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-196792348-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792348
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792348
    reference: chr 3
allele count: 1
allele frequency: 8.827371914833515e-6
allele num: 113284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.461A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-29A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-29A>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-196792354-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792354
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792355
    reference: chr 3
allele count: 1
allele frequency: 9.007223793482373e-6
allele num: 111022
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.454dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-36dupA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-36dupA
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-196792356-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792356
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792357
    reference: chr 3
allele count: 741
allele frequency: 8.656137563665249e-3
allele num: 85604
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.452dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-38dupT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-38dupT
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 1.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8751
  bin: 3.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 1.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 7.5e0
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 2.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 2.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 2
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

3-196792356-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792356
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792355
    reference: chr 3
allele count: 1440
allele frequency: 1.68216438484183e-2
allele num: 85604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.452delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-38delT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-38delT
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 2.75e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 2.25e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 1.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 1.75e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 8751
  bin: 3.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
num of homozygotes: 5
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: TA
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

3-196792356-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792356
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792354
    reference: chr 3
allele count: 2
allele frequency: 2.33633942339143e-5
allele num: 85604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-39_1922-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-39_2135-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-39_1975-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.451_452delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-39_2201-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-39_2234-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-39_2300-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-39_2081-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-39_2081-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-39_2201-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-39_2234-38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-39_1886-38delTT
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: TAA
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

3-196792357-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792357
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792357
    reference: chr 3
allele count: 2
allele frequency: 2.574864175914721e-5
allele num: 77674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.452T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-38T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-38T>A
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

3-196792360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792360
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792360
    reference: chr 3
allele count: 8
allele frequency: 7.269026677327906e-5
allele num: 110056
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.449T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-41T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-41T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11772
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-196792361-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792361
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792361
    reference: chr 3
allele count: 15
allele frequency: 1.370413682210203e-4
allele num: 109456
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-42T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.448T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-42T>G
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9159
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9991
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-196792366-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792366
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792366
    reference: chr 3
allele count: 136
allele frequency: 1.264363541705403e-3
allele num: 107564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.443T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-47T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-47T>G
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 5
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

3-196792366-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792366
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792366
    reference: chr 3
allele count: 4
allele frequency: 3.718716299133539e-5
allele num: 107564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.443T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-47T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-47T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-196792367-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792367
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792367
    reference: chr 3
allele count: 7
allele frequency: 6.523886745326101e-5
allele num: 107298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.442G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-48G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-48G>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-196792370-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792370
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792370
    reference: chr 3
allele count: 1
allele frequency: 9.381567096967878e-6
allele num: 106592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2234-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1922-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2201-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2201-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2081-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1886-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2234-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.439G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2081-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2300-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1975-51G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2135-51G>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6065
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

3-196792540-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792540
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792538
    reference: chr 3
allele count: 1
allele frequency: 8.490982576503753e-6
allele num: 117772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+37_1974+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+37_2200+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+37_2233+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.267_268delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+37_2134+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+37_2299+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+37_2233+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+37_2080+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+37_1885+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+37_1921+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+37_2200+38delTT
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+37_2080+38delTT
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18699
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: TAA
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

3-196792543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792543
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792543
    reference: chr 3
allele count: 1
allele frequency: 8.489973341483707e-6
allele num: 117786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.266C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+36C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+36C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-196792553-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792553
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792553
    reference: chr 3
allele count: 2
allele frequency: 1.687564338390401e-5
allele num: 118514
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.256A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+26A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+26A>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

3-196792554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792554
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792554
    reference: chr 3
allele count: 2
allele frequency: 1.686084742619164e-5
allele num: 118618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.255T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+25T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+25T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-196792556-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792556
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792555
    reference: chr 3
allele count: 1
allele frequency: 8.423748231012871e-6
allele num: 118712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.252delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+22delA
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+22delA
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: AT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-196792559-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792559
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792559
    reference: chr 3
allele count: 1
allele frequency: 8.408448809363649e-6
allele num: 118928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.250A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+20A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+20A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

3-196792559-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792559
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792559
    reference: chr 3
allele count: 1
allele frequency: 8.408448809363649e-6
allele num: 118928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.250A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+20A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+20A>C
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

3-196792569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792569
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792569
    reference: chr 3
allele count: 1
allele frequency: 8.34752412434472e-6
allele num: 119796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.240C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+10C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+10C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

3-196792569-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792569
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792569
    reference: chr 3
allele count: 2
allele frequency: 1.669504824868944e-5
allele num: 119796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.240C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+10C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+10C>A
  variant of: http://identifiers.org/hgnc/2900
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-196792573-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792573
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792573
    reference: chr 3
allele count: 14
allele frequency: 1.165753493097074e-4
allele num: 120094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.236T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974+6T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134+6T>A
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.2299+6T>A
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-196792579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792579
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792579
    reference: chr 3
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2080C>T
  hgvsp: ENSP00000413238.1:p.His694Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2134C>T
  hgvsp: ENSP00000376187.2:p.His712Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2200C>T
  hgvsp: ENSP00000411278.1:p.His734Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1974C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1921C>T
  hgvsp: ENSP00000396658.1:p.His641Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2233C>T
  hgvsp: ENSP00000407531.1:p.His745Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2080C>T
  hgvsp: ENSP00000321087.3:p.His694Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2299C>T
  hgvsp: ENSP00000345731.2:p.His767Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2200C>T
  hgvsp: ENSP00000350303.4:p.His734Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1885C>T
  hgvsp: ENSP00000398939.1:p.His629Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2233C>T
  hgvsp: ENSP00000391732.2:p.His745Tyr
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.230C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His767Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-196792605-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792605
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792605
    reference: chr 3
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2054C>A
  hgvsp: ENSP00000413238.1:p.Pro685His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2054C>A
  hgvsp: ENSP00000321087.3:p.Pro685His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2273C>A
  hgvsp: ENSP00000345731.2:p.Pro758His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2207C>A
  hgvsp: ENSP00000407531.1:p.Pro736His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2174C>A
  hgvsp: ENSP00000411278.1:p.Pro725His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.391C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1948C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1895C>A
  hgvsp: ENSP00000396658.1:p.Pro632His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2108C>A
  hgvsp: ENSP00000376187.2:p.Pro703His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1859C>A
  hgvsp: ENSP00000398939.1:p.Pro620His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2174C>A
  hgvsp: ENSP00000350303.4:p.Pro725His
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.204C>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2207C>A
  hgvsp: ENSP00000391732.2:p.Pro736His
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro758His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

3-196792619-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792619
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792619
    reference: chr 3
allele count: 2
allele frequency: 1.649892756970797e-5
allele num: 121220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2094G>C
  hgvsp: ENSP00000376187.2:p.Leu698Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1845G>C
  hgvsp: ENSP00000398939.1:p.Leu615Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2160G>C
  hgvsp: ENSP00000411278.1:p.Leu720Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2160G>C
  hgvsp: ENSP00000350303.4:p.Leu720Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.190G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2193G>C
  hgvsp: ENSP00000391732.2:p.Leu731Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2040G>C
  hgvsp: ENSP00000321087.3:p.Leu680Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2259G>C
  hgvsp: ENSP00000345731.2:p.Leu753Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1881G>C
  hgvsp: ENSP00000396658.1:p.Leu627Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.377G>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2193G>C
  hgvsp: ENSP00000407531.1:p.Leu731Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2040G>C
  hgvsp: ENSP00000413238.1:p.Leu680Phe
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1934G>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu753Phe
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-196792657-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792657
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792657
    reference: chr 3
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.2002A>G
  hgvsp: ENSP00000413238.1:p.Ile668Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.339A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1896A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2122A>G
  hgvsp: ENSP00000411278.1:p.Ile708Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2221A>G
  hgvsp: ENSP00000345731.2:p.Ile741Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2122A>G
  hgvsp: ENSP00000350303.4:p.Ile708Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1807A>G
  hgvsp: ENSP00000398939.1:p.Ile603Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2056A>G
  hgvsp: ENSP00000376187.2:p.Ile686Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2155A>G
  hgvsp: ENSP00000407531.1:p.Ile719Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1843A>G
  hgvsp: ENSP00000396658.1:p.Ile615Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.2002A>G
  hgvsp: ENSP00000321087.3:p.Ile668Val
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.152A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2155A>G
  hgvsp: ENSP00000391732.2:p.Ile719Val
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile741Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-196792663-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792663
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792663
    reference: chr 3
allele count: 95
allele frequency: 7.852667427135512e-4
allele num: 120978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1996G>T
  hgvsp: ENSP00000413238.1:p.Val666Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2050G>T
  hgvsp: ENSP00000376187.2:p.Val684Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2149G>T
  hgvsp: ENSP00000391732.2:p.Val717Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1837G>T
  hgvsp: ENSP00000396658.1:p.Val613Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2215G>T
  hgvsp: ENSP00000345731.2:p.Val739Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1890G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1801G>T
  hgvsp: ENSP00000398939.1:p.Val601Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2116G>T
  hgvsp: ENSP00000350303.4:p.Val706Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.146G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2149G>T
  hgvsp: ENSP00000407531.1:p.Val717Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1996G>T
  hgvsp: ENSP00000321087.3:p.Val666Leu
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.333G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2116G>T
  hgvsp: ENSP00000411278.1:p.Val706Leu
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18266
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
hgvs: p.Val739Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

3-196792668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792668
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792668
    reference: chr 3
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.141G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2144G>A
  hgvsp: ENSP00000391732.2:p.Arg715Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2111G>A
  hgvsp: ENSP00000411278.1:p.Arg704Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2111G>A
  hgvsp: ENSP00000350303.4:p.Arg704Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2045G>A
  hgvsp: ENSP00000376187.2:p.Arg682Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1991G>A
  hgvsp: ENSP00000413238.1:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2210G>A
  hgvsp: ENSP00000345731.2:p.Arg737Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1991G>A
  hgvsp: ENSP00000321087.3:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2144G>A
  hgvsp: ENSP00000407531.1:p.Arg715Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1885G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1832G>A
  hgvsp: ENSP00000396658.1:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.328G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1796G>A
  hgvsp: ENSP00000398939.1:p.Arg599Gln
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg737Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/3-196792670-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792670
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792670
    reference: chr 3
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1989T>G
  hgvsp: ENST00000422288.1:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.139T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2109T>G
  hgvsp: ENST00000357674.4:c.2109T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2208T>G
  hgvsp: ENST00000346964.2:c.2208T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.326T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1989T>G
  hgvsp: ENST00000314062.3:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2043T>G
  hgvsp: ENST00000392382.2:c.2043T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2109T>G
  hgvsp: ENST00000450955.1:c.2109T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2142T>G
  hgvsp: ENST00000448528.2:c.2142T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1794T>G
  hgvsp: ENST00000452595.1:c.1794T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1830T>G
  hgvsp: ENST00000443183.1:c.1830T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1883T>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2142T>G
  hgvsp: ENST00000419354.1:c.2142T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25073
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr736Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

3-196792671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792671
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792671
    reference: chr 3
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1882C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2108C>T
  hgvsp: ENSP00000350303.4:p.Thr703Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1988C>T
  hgvsp: ENSP00000321087.3:p.Thr663Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1988C>T
  hgvsp: ENSP00000413238.1:p.Thr663Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2042C>T
  hgvsp: ENSP00000376187.2:p.Thr681Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2141C>T
  hgvsp: ENSP00000391732.2:p.Thr714Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1793C>T
  hgvsp: ENSP00000398939.1:p.Thr598Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2207C>T
  hgvsp: ENSP00000345731.2:p.Thr736Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2141C>T
  hgvsp: ENSP00000407531.1:p.Thr714Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1829C>T
  hgvsp: ENSP00000396658.1:p.Thr610Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.138C>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2108C>T
  hgvsp: ENSP00000411278.1:p.Thr703Ile
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.325C>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr736Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

3-196792673-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792673
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792673
    reference: chr 3
allele count: 2
allele frequency: 1.659943893896386e-5
allele num: 120486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2106T>C
  hgvsp: ENST00000357674.4:c.2106T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2040T>C
  hgvsp: ENST00000392382.2:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1880T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.323T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1791T>C
  hgvsp: ENST00000452595.1:c.1791T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2205T>C
  hgvsp: ENST00000346964.2:c.2205T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1827T>C
  hgvsp: ENST00000443183.1:c.1827T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2139T>C
  hgvsp: ENST00000448528.2:c.2139T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1986T>C
  hgvsp: ENST00000422288.1:c.1986T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2106T>C
  hgvsp: ENST00000450955.1:c.2106T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1986T>C
  hgvsp: ENST00000314062.3:c.1986T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2139T>C
  hgvsp: ENST00000419354.1:c.2139T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.136T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr735Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/3-196792697-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792697
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792697
    reference: chr 3
allele count: 1
allele frequency: 8.395177809866013e-6
allele num: 119116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-17G>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-17G>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

3-196792698-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792698
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792698
    reference: chr 3
allele count: 1
allele frequency: 8.398280032249395e-6
allele num: 119072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-18T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-18T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

3-196792699-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792699
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792699
    reference: chr 3
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-19A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-19A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17308
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

3-196792699-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792699
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792699
    reference: chr 3
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-19A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-19A>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

3-196792711-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792711
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792711
    reference: chr 3
allele count: 1
allele frequency: 8.451227963423086e-6
allele num: 118326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-31A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-31A>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

3-196792715-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792715
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792715
    reference: chr 3
allele count: 1
allele frequency: 8.479031355457952e-6
allele num: 117938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-35G>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-35G>A
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14405
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

3-196792725-A-AAACATTTAATTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792725
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792738
    reference: chr 3
allele count: 1
allele frequency: 8.570449091532397e-6
allele num: 116680
alternate allele: AAACATTTAATTGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12701
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-196792726-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792726
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792726
    reference: chr 3
allele count: 66
allele frequency: 5.689458984172959e-4
allele num: 116004
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-46A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-46A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13485
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12700
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-196792732-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196792732
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196792732
    reference: chr 3
allele count: 1
allele frequency: 8.664910578122834e-6
allele num: 115408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2198-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1979-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2099-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.129-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2033-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2132-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2132-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2099-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1784-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1820-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1979-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.316-52A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1873-52A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-196793524-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793524
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793524
    reference: chr 3
allele count: 5
allele frequency: 4.158073315148693e-5
allele num: 120248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+51T>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+51T>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-196793530-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793530
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793530
    reference: chr 3
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+45A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+45A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

3-196793538-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793538
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793537
    reference: chr 3
allele count: 1
allele frequency: 8.297791128001726e-6
allele num: 120514
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+36delG
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+36delG
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: TC
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

3-196793540-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793540
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793540
    reference: chr 3
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+35A>T
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+35A>T
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-196793540-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793540
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793540
    reference: chr 3
allele count: 3
allele frequency: 2.488759104710391e-5
allele num: 120542
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+35A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+35A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

3-196793548-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793548
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793548
    reference: chr 3
allele count: 4
allele frequency: 3.31273913835655e-5
allele num: 120746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+27A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+27A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-196793556-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793556
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793556
    reference: chr 3
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+19T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+19T>A
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-196793560-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793560
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793560
    reference: chr 3
allele count: 3
allele frequency: 2.47999470934462e-5
allele num: 120968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+15T>A
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+15T>A
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8239
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-196793561-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793561
    reference: chr 3
allele count: 2
allele frequency: 1.653329806229747e-5
allele num: 120968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+14A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+14A>G
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

3-196793561-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793561
    reference: chr 3
allele count: 2
allele frequency: 1.653329806229747e-5
allele num: 120968
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2197+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1819+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2098+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2032+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2131+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.315+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1978+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.128+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1783+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1978+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2131+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2098+14A>C
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1872+14A>C
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

3-196793582-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 196793582
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 196793582
    reference: chr 3
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000350303
  ensembl transcript: ENST00000357674
  gene symbol: DLG1
  hgvsc: ENST00000357674.4:c.2091A>G
  hgvsp: ENST00000357674.4:c.2091A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000321087
  ensembl transcript: ENST00000314062
  gene symbol: DLG1
  hgvsc: ENST00000314062.3:c.1971A>G
  hgvsp: ENST00000314062.3:c.1971A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000470629
  gene symbol: DLG1
  hgvsc: ENST00000470629.1:n.308A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000398939
  ensembl transcript: ENST00000452595
  gene symbol: DLG1
  hgvsc: ENST00000452595.1:c.1776A>G
  hgvsp: ENST00000452595.1:c.1776A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000469371
  gene symbol: DLG1
  hgvsc: ENST00000469371.1:n.1865A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000391732
  ensembl transcript: ENST00000448528
  gene symbol: DLG1
  hgvsc: ENST00000448528.2:c.2124A>G
  hgvsp: ENST00000448528.2:c.2124A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000411278
  ensembl transcript: ENST00000450955
  gene symbol: DLG1
  hgvsc: ENST00000450955.1:c.2091A>G
  hgvsp: ENST00000450955.1:c.2091A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000396658
  ensembl transcript: ENST00000443183
  gene symbol: DLG1
  hgvsc: ENST00000443183.1:c.1812A>G
  hgvsp: ENST00000443183.1:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075711
  ensembl transcript: ENST00000475394
  gene symbol: DLG1
  hgvsc: ENST00000475394.1:n.121A>G
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000413238
  ensembl transcript: ENST00000422288
  gene symbol: DLG1
  hgvsc: ENST00000422288.1:c.1971A>G
  hgvsp: ENST00000422288.1:c.1971A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000407531
  ensembl transcript: ENST00000419354
  gene symbol: DLG1
  hgvsc: ENST00000419354.1:c.2124A>G
  hgvsp: ENST00000419354.1:c.2124A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000376187
  ensembl transcript: ENST00000392382
  gene symbol: DLG1
  hgvsc: ENST00000392382.2:c.2025A>G
  hgvsp: ENST00000392382.2:c.2025A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075711
  ensembl protein: ENSP00000345731
  ensembl transcript: ENST00000346964
  gene symbol: DLG1
  hgvsc: ENST00000346964.2:c.2190A>G
  hgvsp: ENST00000346964.2:c.2190A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2900
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8245
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln730Gln
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 498
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4766
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9527
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9010
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.618122977346278e-3
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.004924037710923e-5
allele num: 66612
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.835086860778077e-4
allele num: 16348
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.322351e6

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e0

QD
type: SiteQuality
SIO_000300: 1.41e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.116e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

GenotypeDepth
all individuals: 2771
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7718
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4766
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9549
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8988
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999850007499625e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.262e1

DP
type: SiteQuality
SIO_000300: 2.320943e6

VQSLOD
type: SiteQuality
SIO_000300: 4.41e0

GenotypeDepth
all individuals: 440
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8986
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 2.703e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 2.32093e6

GenotypeDepth
all individuals: 862
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 626
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1727
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9546
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 2.320972e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.095e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e0

FS
type: SiteQuality
SIO_000300: 1.953e0

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeDepth
all individuals: 300
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1726
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9546
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29610
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 1.372e0

VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.253e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.320971e6

QD
type: SiteQuality
SIO_000300: 1.28e1

GenotypeDepth
all individuals: 2773
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1229
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9549
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8988
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.81139337952271e-4
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.199904007679386e-4
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

FS
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

DP
type: SiteQuality
SIO_000300: 2.321569e6

QD
type: SiteQuality
SIO_000300: 1.335e1

GenotypeDepth
all individuals: 15025
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16334
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2772
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8976
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.500777336327518e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 2.320801e6

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

FS
type: SiteQuality
SIO_000300: 2.657e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeDepth
all individuals: 16337
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8964
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1285
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9539
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 2.317805e6

VQSLOD
type: SiteQuality
SIO_000300: 5.06e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.394e0

GenotypeDepth
all individuals: 300
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8963
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29347
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.986e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

FS
type: SiteQuality
SIO_000300: 2.191e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.43e0

QD
type: SiteQuality
SIO_000300: 1.183e1

DP
type: SiteQuality
SIO_000300: 2.316831e6

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.53e-1

GenotypeDepth
all individuals: 16342
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8960
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
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variant carriers: 0

GenotypeQuality
all individuals: 28952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

QD
type: SiteQuality
SIO_000300: 1.022e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

DP
type: SiteQuality
SIO_000300: 2.312955e6

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

FS
type: SiteQuality
SIO_000300: 7.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

GenotypeDepth
all individuals: 1160
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1718
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variant carriers: 0

GenotypeQuality
all individuals: 3554
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variant carriers: 0

GenotypeQuality
all individuals: 174
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 9367
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2707
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8958
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
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variant carriers: 0

GenotypeQuality
all individuals: 27660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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SIO_000300: 2.0e-1

QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 14476
num of homozygotes: 0

European (Non-Finnish)
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allele num: 65818
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DP
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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SIO_000300: 3.0e-4

QD
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ReadPosRankSum
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SIO_000300: 7.44e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65202
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

VQSLOD
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SIO_000300: 4.36e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.533695285420693e-5
allele num: 65202
num of homozygotes: 0

Latino
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.1e-3

ClippingRankSum
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DP
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ReadPosRankSum
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FS
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QD
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MQ
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MQRankSum
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SIO_000300: 2.7e-1

BaseQRankSum
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SIO_000300: -1.35e0

VQSLOD
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SIO_000300: 4.36e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.094633904809061e-5
allele num: 64628
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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African
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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MQ
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FS
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MQRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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Latino
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East Asian
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South Asian
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.191043353978085e-4
allele num: 8396
num of homozygotes: 0

European (Finnish)
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South Asian
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Latino
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African
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European (Non-Finnish)
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Other
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.588511882068878e-5
allele num: 62952
num of homozygotes: 0

Other
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European (Finnish)
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Latino
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South Asian
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African
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East Asian
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.525e1

GenotypeDepth
all individuals: 498
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5785
bin: 9.75e1
variant carriers: 246

GenotypeQuality
all individuals: 2994
bin: 3.75e1
variant carriers: 62

GenotypeQuality
all individuals: 750
bin: 5.75e1
variant carriers: 41

GenotypeQuality
all individuals: 1971
bin: 4.25e1
variant carriers: 55

GenotypeQuality
all individuals: 3662
bin: 2.75e1
variant carriers: 84

GenotypeQuality
all individuals: 1488
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 9221
bin: 2.5e0
variant carriers: 47

GenotypeQuality
all individuals: 6155
bin: 2.25e1
variant carriers: 81

GenotypeQuality
all individuals: 1573
bin: 1.75e1
variant carriers: 74

GenotypeQuality
all individuals: 2254
bin: 1.25e1
variant carriers: 60

GenotypeQuality
all individuals: 3713
bin: 3.25e1
variant carriers: 50

GenotypeQuality
all individuals: 3505
bin: 7.5e0
variant carriers: 72

GenotypeQuality
all individuals: 3381
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 1179
bin: 8.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 751
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 7066
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1234
bin: 5.25e1
variant carriers: 48

GenotypeQuality
all individuals: 1758
bin: 4.75e1
variant carriers: 41

GenotypeQuality
all individuals: 669
bin: 8.75e1
variant carriers: 12

East Asian
type: Population
allele count: 214
allele frequency: 3.21417843196155e-2
allele num: 6658
num of homozygotes: 2

Latino
type: Population
allele count: 89
allele frequency: 1.07436021245775e-2
allele num: 8284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.02424035506999e-3
allele num: 5858
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 8.040201005025126e-3
allele num: 7960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 253
allele frequency: 5.226840756962234e-3
allele num: 48404
num of homozygotes: 0

South Asian
type: Population
allele count: 111
allele frequency: 1.424903722721438e-2
allele num: 7790
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 6.153846153846154e-3
allele num: 650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.955219e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.997e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.08e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

QD
type: SiteQuality
SIO_000300: 2.15e0

GenotypeDepth
all individuals: 3863
bin: 4.25e1
variant carriers: 69

GenotypeQuality
all individuals: 750
bin: 5.75e1
variant carriers: 53

GenotypeQuality
all individuals: 6155
bin: 2.25e1
variant carriers: 159

GenotypeQuality
all individuals: 669
bin: 8.75e1
variant carriers: 23

GenotypeQuality
all individuals: 2254
bin: 1.25e1
variant carriers: 99

GenotypeQuality
all individuals: 1971
bin: 4.25e1
variant carriers: 77

GenotypeQuality
all individuals: 751
bin: 9.25e1
variant carriers: 11

GenotypeQuality
all individuals: 3713
bin: 3.25e1
variant carriers: 118

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 19

GenotypeQuality
all individuals: 9221
bin: 2.5e0
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GenotypeQuality
all individuals: 2994
bin: 3.75e1
variant carriers: 92

GenotypeQuality
all individuals: 1234
bin: 5.25e1
variant carriers: 57

GenotypeQuality
all individuals: 1573
bin: 1.75e1
variant carriers: 134

GenotypeQuality
all individuals: 1758
bin: 4.75e1
variant carriers: 56

GenotypeQuality
all individuals: 3662
bin: 2.75e1
variant carriers: 115

GenotypeQuality
all individuals: 1179
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 7066
bin: 6.25e1
variant carriers: 33

GenotypeQuality
all individuals: 1488
bin: 7.75e1
variant carriers: 22

GenotypeQuality
all individuals: 3505
bin: 7.5e0
variant carriers: 98

GenotypeQuality
all individuals: 3381
bin: 6.75e1
variant carriers: 39

GenotypeQuality
all individuals: 5785
bin: 9.75e1
variant carriers: 561

South Asian
type: Population
allele count: 104
allele frequency: 1.335044929396662e-2
allele num: 7790
num of homozygotes: 0

African
type: Population
allele count: 65
allele frequency: 8.165829145728644e-3
allele num: 7960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 19
allele frequency: 3.243427791054968e-3
allele num: 5858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 768
allele frequency: 1.586645731757706e-2
allele num: 48404
num of homozygotes: 0

East Asian
type: Population
allele count: 353
allele frequency: 5.301892460198258e-2
allele num: 6658
num of homozygotes: 5

Latino
type: Population
allele count: 123
allele frequency: 1.484789956542733e-2
allele num: 8284
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 1.230769230769231e-2
allele num: 650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

QD
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 1.955219e6

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.08e-2

MQ
type: SiteQuality
SIO_000300: 5.997e1

GenotypeDepth
all individuals: 1652
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7066
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variant carriers: 0

GenotypeQuality
all individuals: 5785
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variant carriers: 1

GenotypeQuality
all individuals: 1234
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variant carriers: 1

GenotypeQuality
all individuals: 1488
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variant carriers: 0

GenotypeQuality
all individuals: 2994
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variant carriers: 0

GenotypeQuality
all individuals: 1971
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variant carriers: 0

GenotypeQuality
all individuals: 1573
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variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9221
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GenotypeQuality
all individuals: 1758
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variant carriers: 0

GenotypeQuality
all individuals: 751
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variant carriers: 0

GenotypeQuality
all individuals: 3662
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
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variant carriers: 0

GenotypeQuality
all individuals: 669
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variant carriers: 0

GenotypeQuality
all individuals: 3713
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variant carriers: 0

GenotypeQuality
all individuals: 6155
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variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.256281407035176e-4
allele num: 7960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6658
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.207146306132303e-4
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48404
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

QD
type: SiteQuality
SIO_000300: 2.15e0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.955219e6

GenotypeDepth
all individuals: 710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
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variant carriers: 0

GenotypeQuality
all individuals: 854
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variant carriers: 0

GenotypeQuality
all individuals: 1804
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variant carriers: 0

GenotypeQuality
all individuals: 582
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variant carriers: 0

GenotypeQuality
all individuals: 701
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GenotypeQuality
all individuals: 3081
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variant carriers: 0

GenotypeQuality
all individuals: 3006
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variant carriers: 0

GenotypeQuality
all individuals: 2714
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variant carriers: 0

GenotypeQuality
all individuals: 1542
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variant carriers: 0

GenotypeQuality
all individuals: 1817
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variant carriers: 0

GenotypeQuality
all individuals: 1267
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variant carriers: 0

GenotypeQuality
all individuals: 5439
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variant carriers: 0

GenotypeQuality
all individuals: 11255
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GenotypeQuality
all individuals: 3382
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variant carriers: 0

GenotypeQuality
all individuals: 2017
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variant carriers: 0

GenotypeQuality
all individuals: 6760
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variant carriers: 0

GenotypeQuality
all individuals: 4910
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variant carriers: 2

GenotypeQuality
all individuals: 1069
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variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.489868891537545e-4
allele num: 6712
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.329080276448698e-4
allele num: 7524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5690
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.35e-2

DP
type: SiteQuality
SIO_000300: 1.816469e6

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.641e0

FS
type: SiteQuality
SIO_000300: 6.258e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.175e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.186e0

QD
type: SiteQuality
SIO_000300: 7.0e0

GenotypeDepth
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
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variant carriers: 0

GenotypeQuality
all individuals: 3961
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variant carriers: 0

GenotypeQuality
all individuals: 341
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GenotypeQuality
all individuals: 6464
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variant carriers: 0

GenotypeQuality
all individuals: 2392
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variant carriers: 0

GenotypeQuality
all individuals: 2006
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variant carriers: 0

GenotypeQuality
all individuals: 1068
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variant carriers: 0

GenotypeQuality
all individuals: 147
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GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 1789
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GenotypeQuality
all individuals: 14545
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GenotypeQuality
all individuals: 3073
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
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variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 8.75e1
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GenotypeQuality
all individuals: 7121
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 1227
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variant carriers: 0

GenotypeQuality
all individuals: 6975
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variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.28122998078155e-4
allele num: 62440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.642e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

GenotypeDepth
all individuals: 1082
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variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3665
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GenotypeQuality
all individuals: 1002
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variant carriers: 0

GenotypeQuality
all individuals: 6408
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variant carriers: 0

GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 657
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GenotypeQuality
all individuals: 2330
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GenotypeQuality
all individuals: 7127
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
all individuals: 924
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GenotypeQuality
all individuals: 1822
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GenotypeQuality
all individuals: 895
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GenotypeQuality
all individuals: 3135
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GenotypeQuality
all individuals: 2758
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GenotypeQuality
all individuals: 11654
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GenotypeQuality
all individuals: 5744
bin: 6.75e1
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GenotypeQuality
all individuals: 1072
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4248
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variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1624
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.414681262073406e-4
allele num: 62120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.19e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

DP
type: SiteQuality
SIO_000300: 1.807665e6

QD
type: SiteQuality
SIO_000300: 1.734e1

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

GenotypeDepth
all individuals: 1613
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
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GenotypeQuality
all individuals: 998
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GenotypeQuality
all individuals: 5607
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variant carriers: 1

GenotypeQuality
all individuals: 1143
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GenotypeQuality
all individuals: 1979
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variant carriers: 8

GenotypeQuality
all individuals: 3022
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variant carriers: 1

GenotypeQuality
all individuals: 524
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GenotypeQuality
all individuals: 2640
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GenotypeQuality
all individuals: 4013
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GenotypeQuality
all individuals: 2139
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2134
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GenotypeQuality
all individuals: 3577
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2418
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GenotypeQuality
all individuals: 1853
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GenotypeQuality
all individuals: 1695
bin: 1.75e1
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GenotypeQuality
all individuals: 9031
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GenotypeQuality
all individuals: 1219
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GenotypeQuality
all individuals: 7228
bin: 9.75e1
variant carriers: 128

GenotypeQuality
all individuals: 4600
bin: 6.75e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.116850127011008e-4
allele num: 9448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.277721328132682e-5
allele num: 61018
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.262626262626263e-3
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 131
allele frequency: 1.223612927330469e-2
allele num: 10706
num of homozygotes: 5

QD
type: SiteQuality
SIO_000300: 1.285e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.790275e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

GenotypeDepth
all individuals: 306
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variant carriers: 0

GenotypeQuality
all individuals: 7228
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2640
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GenotypeQuality
all individuals: 1979
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.030160736861116e-5
allele num: 11074
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.916581992199023e-5
allele num: 61018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10706
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
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SIO_000300: 3.12e0

ReadPosRankSum
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SIO_000300: 5.31e-1

InbreedingCoeff
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SIO_000300: 1.59e-2

DP
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SIO_000300: 1.790275e6

QD
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.641928280572704e-5
allele num: 60904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.05999576001696e-4
allele num: 9434
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.255650426921145e-4
allele num: 7964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.807337791433219e-4
allele num: 11066
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.883948756593821e-4
allele num: 10616
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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DP
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SIO_000300: 1.788591e6

BaseQRankSum
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SIO_000300: -2.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

FS
type: SiteQuality
SIO_000300: 1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1962
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GenotypeQuality
all individuals: 1001
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GenotypeQuality
all individuals: 4073
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.06951871657754e-4
allele num: 9350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.144e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ReadPosRankSum
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SIO_000300: -1.47e-1

BaseQRankSum
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SIO_000300: -2.084e0

FS
type: SiteQuality
SIO_000300: 5.132e0

VQSLOD
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SIO_000300: -1.335e0

MQRankSum
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SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.776676e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 685
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variant carriers: 0

GenotypeQuality
all individuals: 106
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2054
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2151
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GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534212948757288e-5
allele num: 65180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15014
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 5.994e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

DP
type: SiteQuality
SIO_000300: 1.719605e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 2.211e1

GenotypeDepth
all individuals: 235
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variant carriers: 0

GenotypeQuality
all individuals: 1924
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2156
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 29350
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176470588235294e-4
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65188
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.6e1

VQSLOD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.364e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.73232e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2162
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.952743604764694e-4
allele num: 10242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65560
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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FS
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SIO_000300: 6.483e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.770189e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2163
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GenotypeQuality
all individuals: 6251
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.332633543270352e-4
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 4.88e0

ClippingRankSum
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SIO_000300: -1.55e-1

MQRankSum
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SIO_000300: 1.6e-1

InbreedingCoeff
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DP
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeDepth
all individuals: 1037
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele num: 6584
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African
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European (Non-Finnish)
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Latino
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Other
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East Asian
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South Asian
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10268
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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Other
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513637877274241e-5
allele num: 66066
num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15772
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 3.03030303030303e-4
allele num: 6600
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European (Non-Finnish)
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
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allele frequency: 6.263309532757109e-5
allele num: 15966
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.965765438819331e-4
allele num: 66132
num of homozygotes: 0

European (Finnish)
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Other
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African
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East Asian
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MQ
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InbreedingCoeff
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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Other
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MQRankSum
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FS
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DP
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ClippingRankSum
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VQSLOD
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.50159168718842e-5
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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FS
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.002191599867904e-5
allele num: 66618
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Other
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 8

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.827485380116959e-4
allele num: 16416
num of homozygotes: 0

Latino
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allele frequency: 4.332755632582322e-4
allele num: 11540
num of homozygotes: 0

East Asian
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Other
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African
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allele frequency: 1.64664858581945e-3
allele num: 10324
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European (Non-Finnish)
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allele frequency: 1.05199879771566e-3
allele num: 66540
num of homozygotes: 0

ClippingRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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DP
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VQSLOD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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MQRankSum
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FS
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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African
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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Latino
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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Other
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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MQ
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DP
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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East Asian
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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African
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European (Finnish)
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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European (Finnish)
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QD
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537468097536976e-5
allele num: 65042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.255e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.502e1

VQSLOD
type: SiteQuality
SIO_000300: -8.062e-1

DP
type: SiteQuality
SIO_000300: 1.667637e6

GenotypeQuality
all individuals: 4281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1757
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552746809105307e-5
allele num: 64402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.687e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.179e0

QD
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 3.996e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.60312e6

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 64

GenotypeQuality
all individuals: 1633
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GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.316104331179708e-3
allele num: 8358
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.595435958316844e-5
allele num: 15162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.581551618814905e-4
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 7.813965118459712e-4
allele num: 63988
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

DP
type: SiteQuality
SIO_000300: 1.603246e6

QD
type: SiteQuality
SIO_000300: 1.602e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 530
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6080
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GenotypeQuality
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GenotypeQuality
all individuals: 3793
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GenotypeQuality
all individuals: 928
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.877840909090909e-5
allele num: 11264
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.595283e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.208e0

VQSLOD
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.293e1

MQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.205e0

GenotypeDepth
all individuals: 5033
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2133
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variant carriers: 0

GenotypeDepth
all individuals: 582
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variant carriers: 0

GenotypeQuality
all individuals: 156
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 65
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GenotypeQuality
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GenotypeQuality
all individuals: 3496
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GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.0517578125e-4
allele num: 16384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.624131e6

FS
type: SiteQuality
SIO_000300: 1.833e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

InbreedingCoeff
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SIO_000300: 4.1e-3

BaseQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 2.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

QD
type: SiteQuality
SIO_000300: 1.584e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506387081224391e-5
allele num: 66384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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GenotypeDepth
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bin: 9.75e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504800312998465e-5
allele num: 66454
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
type: SiteQuality
SIO_000300: 2.642256e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 79
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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SIO_000300: 2.39e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.512771142332802e-5
allele num: 66478
num of homozygotes: 0

African
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East Asian
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Other
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South Asian
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DP
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.011602392617753e-5
allele num: 66538
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 9.6e-2

MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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SIO_000300: 1.28e-1

QD
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SIO_000300: 1.151e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66600
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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SIO_000300: 1.81e-1

MQRankSum
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InbreedingCoeff
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FS
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MQ
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SIO_000300: 5.982e1

QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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SIO_000300: 2.656443e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
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African
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allele frequency: 2.948692746215844e-4
allele num: 10174
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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South Asian
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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Other
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 3.002371873780286e-5
allele num: 66614
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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MQ
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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Latino
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DP
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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