1-151001442-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001442
    reference: chr 1
allele count: 1
allele frequency: 8.40745909771149e-6
allele num: 118942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1639A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+22A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1639A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+22A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+22A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+22A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1639A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1639A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+22A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1639A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12632
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-151001444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001444
    reference: chr 1
allele count: 1
allele frequency: 8.421194462222522e-6
allele num: 118748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+24C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+24C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1641C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+24C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1641C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+24C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1641C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1641C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1641C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+24C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

1-151001447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001447
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001447
    reference: chr 1
allele count: 1
allele frequency: 8.426161546369167e-6
allele num: 118678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+27A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1644A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1644A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1644A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+27A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+27A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1644A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1644A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+27A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+27A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25020
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-151001450-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001450
    reference: chr 1
allele count: 8
allele frequency: 6.757898293630681e-5
allele num: 118380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1647A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+30A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+30A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+30A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1647A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+30A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1647A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1647A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1647A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+30A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11143
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-151001451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001451
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001451
    reference: chr 1
allele count: 1
allele frequency: 8.449799739746167e-6
allele num: 118346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1648G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+31G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1648G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1648G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+31G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1648G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+31G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+31G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1648G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+31G>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/1-151001452-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001452
    reference: chr 1
allele count: 1
allele frequency: 8.456373568758774e-6
allele num: 118254
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+32C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1649C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+32C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1649C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1649C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+32C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1649C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+32C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1649C>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+32C>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19726
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6452
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-151001452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001452
    reference: chr 1
allele count: 9
allele frequency: 7.610736211882896e-5
allele num: 118254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1649C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+32C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+32C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1649C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1649C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1649C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+32C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1649C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+32C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+32C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19726
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-151001462-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001462
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001462
    reference: chr 1
allele count: 1
allele frequency: 8.520064752492119e-6
allele num: 117370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+42T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+42T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1659T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+42T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1659T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1659T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+42T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+42T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1659T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1659T>C
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14232
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6524
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-151001469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001469
    reference: chr 1
allele count: 1
allele frequency: 8.593132368611007e-6
allele num: 116372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+49G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1666G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1666G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1666G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+49G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+49G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+49G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+49G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1666G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1666G>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-151001471-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151001471
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151001471
    reference: chr 1
allele count: 3
allele frequency: 2.580423189403062e-5
allele num: 116260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.228+1668A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.228+1668A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.297+1668A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.755+51A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.682+51A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.933+51A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.387+51A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.78+1668A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.387+51A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.228+1668A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9974
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

1-151006231-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006231
    reference: chr 1
allele count: 1
allele frequency: 8.556662217202314e-6
allele num: 116868
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-51C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-51C>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

1-151006239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006239
    reference: chr 1
allele count: 13
allele frequency: 1.111491108071135e-4
allele num: 116960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-43C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-43C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

1-151006241-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006241
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006241
    reference: chr 1
allele count: 2
allele frequency: 1.707825255319876e-5
allele num: 117108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-41G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-41G>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

1-151006242-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006242
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006242
    reference: chr 1
allele count: 3
allele frequency: 2.562569402921329e-5
allele num: 117070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-40C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-40C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46367
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

1-151006249-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006249
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006249
    reference: chr 1
allele count: 2
allele frequency: 1.704390509953641e-5
allele num: 117344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-33T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-33T>C
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-151006259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006259
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006259
    reference: chr 1
allele count: 2
allele frequency: 1.695720002713152e-5
allele num: 117944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-23C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-23C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46389
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-151006266-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006266
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006266
    reference: chr 1
allele count: 47
allele frequency: 3.961898339374526e-4
allele num: 118630
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-16A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-16A>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4997
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

1-151006267-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006267
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006267
    reference: chr 1
allele count: 1
allele frequency: 8.424457886135027e-6
allele num: 118702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-15T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-15T>C
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

1-151006274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006274
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006274
    reference: chr 1
allele count: 1
allele frequency: 8.363861427543869e-6
allele num: 119562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-8C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-8C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
hgvs: c.934-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

1-151006278-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006278
    reference: chr 1
allele count: 3
allele frequency: 2.501459184524306e-5
allele num: 119930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.683-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.229-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.388-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.229-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.298-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.756-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.934-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.229-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.79-4T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.388-4T>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 9.25e1
  variant carriers: 0
hgvs: c.934-4T>A
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-151006286-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006286
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006286
    reference: chr 1
allele count: 1
allele frequency: 8.300408380092301e-6
allele num: 120476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.392G>T
  hgvsp: ENSP00000357932.1:p.Cys131Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.233G>T
  hgvsp: ENSP00000357933.1:p.Cys78Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.233G>T
  hgvsp: ENSP00000392632.1:p.Cys78Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.302G>T
  hgvsp: ENSP00000271619.8:p.Cys101Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.760G>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.233G>T
  hgvsp: ENSP00000357930.1:p.Cys78Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.938G>T
  hgvsp: ENSP00000271620.3:p.Cys313Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.392G>T
  hgvsp: ENSP00000387696.1:p.Cys131Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.83G>T
  hgvsp: ENSP00000357931.1:p.Cys28Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.687G>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys313Phe
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-151006294-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006294
    reference: chr 1
allele count: 2
allele frequency: 1.654095540558423e-5
allele num: 120912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.695C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.310C>G
  hgvsp: ENSP00000271619.8:p.Leu104Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.400C>G
  hgvsp: ENSP00000357932.1:p.Leu134Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.241C>G
  hgvsp: ENSP00000357930.1:p.Leu81Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.946C>G
  hgvsp: ENSP00000271620.3:p.Leu316Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.241C>G
  hgvsp: ENSP00000392632.1:p.Leu81Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.91C>G
  hgvsp: ENSP00000357931.1:p.Leu31Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.768C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.400C>G
  hgvsp: ENSP00000387696.1:p.Leu134Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.241C>G
  hgvsp: ENSP00000357933.1:p.Leu81Val
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu316Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

1-151006299-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006299
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006299
    reference: chr 1
allele count: 1
allele frequency: 8.262823902696986e-6
allele num: 121024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.315A>T
  hgvsp: ENSP00000271619.8:p.Glu105Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.246A>T
  hgvsp: ENSP00000357930.1:p.Glu82Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.700A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.96A>T
  hgvsp: ENSP00000357931.1:p.Glu32Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.773A>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.246A>T
  hgvsp: ENSP00000392632.1:p.Glu82Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.246A>T
  hgvsp: ENSP00000357933.1:p.Glu82Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.405A>T
  hgvsp: ENSP00000387696.1:p.Glu135Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.951A>T
  hgvsp: ENSP00000271620.3:p.Glu317Asp
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.405A>T
  hgvsp: ENSP00000357932.1:p.Glu135Asp
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu317Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

1-151006300-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006300
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006300
    reference: chr 1
allele count: 2
allele frequency: 1.652155236506022e-5
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.316C>T
  hgvsp: ENSP00000271619.8:p.Arg106Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.952C>T
  hgvsp: ENSP00000271620.3:p.Arg318Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.247C>T
  hgvsp: ENSP00000357930.1:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.701C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.774C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.406C>T
  hgvsp: ENSP00000387696.1:p.Arg136Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.406C>T
  hgvsp: ENSP00000357932.1:p.Arg136Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.247C>T
  hgvsp: ENSP00000357933.1:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.97C>T
  hgvsp: ENSP00000357931.1:p.Arg33Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.247C>T
  hgvsp: ENSP00000392632.1:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg318Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-151006301-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006301
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006301
    reference: chr 1
allele count: 5
allele frequency: 4.128819157720892e-5
allele num: 121100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.248G>C
  hgvsp: ENSP00000357930.1:p.Arg83Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.953G>C
  hgvsp: ENSP00000271620.3:p.Arg318Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.775G>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.248G>C
  hgvsp: ENSP00000392632.1:p.Arg83Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.702G>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.98G>C
  hgvsp: ENSP00000357931.1:p.Arg33Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.317G>C
  hgvsp: ENSP00000271619.8:p.Arg106Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.407G>C
  hgvsp: ENSP00000357932.1:p.Arg136Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.407G>C
  hgvsp: ENSP00000387696.1:p.Arg136Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.248G>C
  hgvsp: ENSP00000357933.1:p.Arg83Pro
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5045
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg318Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-151006306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006306
    reference: chr 1
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.322C>T
  hgvsp: ENSP00000271619.8:p.His108Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.958C>T
  hgvsp: ENSP00000271620.3:p.His320Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.780C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.253C>T
  hgvsp: ENSP00000392632.1:p.His85Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.412C>T
  hgvsp: ENSP00000387696.1:p.His138Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.707C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.103C>T
  hgvsp: ENSP00000357931.1:p.His35Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.412C>T
  hgvsp: ENSP00000357932.1:p.His138Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.253C>T
  hgvsp: ENSP00000357930.1:p.His85Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.253C>T
  hgvsp: ENSP00000357933.1:p.His85Tyr
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His320Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-151006309-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006309
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006309
    reference: chr 1
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.256T>A
  hgvsp: ENSP00000357933.1:p.Ser86Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.783T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000462440
  gene symbol: PRUNE
  hgvsc: ENST00000462440.1:n.710T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.106T>A
  hgvsp: ENSP00000357931.1:p.Ser36Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.256T>A
  hgvsp: ENSP00000357930.1:p.Ser86Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.256T>A
  hgvsp: ENSP00000392632.1:p.Ser86Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.325T>A
  hgvsp: ENSP00000271619.8:p.Ser109Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.961T>A
  hgvsp: ENSP00000271620.3:p.Ser321Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000387696
  ensembl transcript: ENST00000450884
  gene symbol: PRUNE
  hgvsc: ENST00000450884.1:c.415T>A
  hgvsp: ENSP00000387696.1:p.Ser139Thr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.415T>A
  hgvsp: ENSP00000357932.1:p.Ser139Thr
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser321Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-151006340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006340
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.287G>A
  hgvsp: ENSP00000392632.1:p.Ser96Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.137G>A
  hgvsp: ENSP00000357931.1:p.Ser46Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.287G>A
  hgvsp: ENSP00000357930.1:p.Ser96Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.356G>A
  hgvsp: ENSP00000271619.8:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.992G>A
  hgvsp: ENSP00000271620.3:p.Ser331Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.287G>A
  hgvsp: ENSP00000357933.1:p.Ser96Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.814G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.446G>A
  hgvsp: ENSP00000357932.1:p.Ser149Asn
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser331Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

1-151006347-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006347
    reference: chr 1
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.821C>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.999C>G
  hgvsp: ENSP00000271620.3:p.His333Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.144C>G
  hgvsp: ENSP00000357931.1:p.His48Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.294C>G
  hgvsp: ENSP00000392632.1:p.His98Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.453C>G
  hgvsp: ENSP00000357932.1:p.His151Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.294C>G
  hgvsp: ENSP00000357930.1:p.His98Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.294C>G
  hgvsp: ENSP00000357933.1:p.His98Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.363C>G
  hgvsp: ENSP00000271619.8:p.His121Gln
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His333Gln
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-151006347-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006347
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.363C>T
  hgvsp: ENST00000271619.8:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.821C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.294C>T
  hgvsp: ENST00000368937.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.294C>T
  hgvsp: ENST00000368934.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.294C>T
  hgvsp: ENST00000431193.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.453C>T
  hgvsp: ENST00000368936.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.999C>T
  hgvsp: ENST00000271620.3:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.144C>T
  hgvsp: ENST00000368935.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His333His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

1-151006354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006354
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.460C>T
  hgvsp: ENSP00000357932.1:p.Leu154Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.301C>T
  hgvsp: ENSP00000357933.1:p.Leu101Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.151C>T
  hgvsp: ENSP00000357931.1:p.Leu51Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.301C>T
  hgvsp: ENSP00000357930.1:p.Leu101Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.301C>T
  hgvsp: ENSP00000392632.1:p.Leu101Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1006C>T
  hgvsp: ENSP00000271620.3:p.Leu336Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.370C>T
  hgvsp: ENSP00000271619.8:p.Leu124Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.828C>T
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu336Phe
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum

1-151006363-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006363
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.837T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.160T>C
  hgvsp: ENSP00000357931.1:p.Tyr54His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.310T>C
  hgvsp: ENSP00000392632.1:p.Tyr104His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1015T>C
  hgvsp: ENSP00000271620.3:p.Tyr339His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.310T>C
  hgvsp: ENSP00000357930.1:p.Tyr104His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.379T>C
  hgvsp: ENSP00000271619.8:p.Tyr127His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.310T>C
  hgvsp: ENSP00000357933.1:p.Tyr104His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.469T>C
  hgvsp: ENSP00000357932.1:p.Tyr157His
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr339His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

1-151006364-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006364
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006364
    reference: chr 1
allele count: 23
allele frequency: 1.894532215284756e-4
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.161A>G
  hgvsp: ENSP00000357931.1:p.Tyr54Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.311A>G
  hgvsp: ENSP00000357930.1:p.Tyr104Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1016A>G
  hgvsp: ENSP00000271620.3:p.Tyr339Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.311A>G
  hgvsp: ENSP00000392632.1:p.Tyr104Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.311A>G
  hgvsp: ENSP00000357933.1:p.Tyr104Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.380A>G
  hgvsp: ENSP00000271619.8:p.Tyr127Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.470A>G
  hgvsp: ENSP00000357932.1:p.Tyr157Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.838A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr339Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-151006366-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006366
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006366
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.382C>A
  hgvsp: ENSP00000271619.8:p.Leu128Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.472C>A
  hgvsp: ENSP00000357932.1:p.Leu158Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1018C>A
  hgvsp: ENSP00000271620.3:p.Leu340Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.163C>A
  hgvsp: ENSP00000357931.1:p.Leu55Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.313C>A
  hgvsp: ENSP00000357933.1:p.Leu105Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.313C>A
  hgvsp: ENSP00000392632.1:p.Leu105Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.313C>A
  hgvsp: ENSP00000357930.1:p.Leu105Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.840C>A
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu340Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-151006382-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006382
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.329A>G
  hgvsp: ENSP00000357930.1:p.Gln110Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1034A>G
  hgvsp: ENSP00000271620.3:p.Gln345Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.179A>G
  hgvsp: ENSP00000357931.1:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.398A>G
  hgvsp: ENSP00000271619.8:p.Gln133Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.329A>G
  hgvsp: ENSP00000392632.1:p.Gln110Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.329A>G
  hgvsp: ENSP00000357933.1:p.Gln110Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.488A>G
  hgvsp: ENSP00000357932.1:p.Gln163Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.856A>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46580
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln345Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-151006384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006384
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.490G>A
  hgvsp: ENSP00000357932.1:p.Val164Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.331G>A
  hgvsp: ENSP00000392632.1:p.Val111Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.331G>A
  hgvsp: ENSP00000357930.1:p.Val111Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.181G>A
  hgvsp: ENSP00000357931.1:p.Val61Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.400G>A
  hgvsp: ENSP00000271619.8:p.Val134Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1036G>A
  hgvsp: ENSP00000271620.3:p.Val346Ile
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.858G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.331G>A
  hgvsp: ENSP00000357933.1:p.Val111Ile
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val346Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

1-151006390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006390
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006390
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.496C>T
  hgvsp: ENSP00000357932.1:p.Arg166Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.337C>T
  hgvsp: ENSP00000392632.1:p.Arg113Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.406C>T
  hgvsp: ENSP00000271619.8:p.Arg136Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.864C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.337C>T
  hgvsp: ENSP00000357930.1:p.Arg113Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.187C>T
  hgvsp: ENSP00000357931.1:p.Arg63Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1042C>T
  hgvsp: ENSP00000271620.3:p.Arg348Ter
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.337C>T
  hgvsp: ENSP00000357933.1:p.Arg113Ter
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg348Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

1-151006391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006391
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006391
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.188G>A
  hgvsp: ENSP00000357931.1:p.Arg63Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.338G>A
  hgvsp: ENSP00000357933.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.497G>A
  hgvsp: ENSP00000357932.1:p.Arg166Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.407G>A
  hgvsp: ENSP00000271619.8:p.Arg136Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.338G>A
  hgvsp: ENSP00000392632.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.338G>A
  hgvsp: ENSP00000357930.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.865G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1043G>A
  hgvsp: ENSP00000271620.3:p.Arg348Gln
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46581
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg348Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-151006398-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006398
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.345A>G
  hgvsp: ENST00000431193.1:c.345A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.414A>G
  hgvsp: ENST00000271619.8:c.414A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.345A>G
  hgvsp: ENST00000368934.1:c.345A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.195A>G
  hgvsp: ENST00000368935.1:c.195A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.872A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.504A>G
  hgvsp: ENST00000368936.1:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.345A>G
  hgvsp: ENST00000368937.1:c.345A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1050A>G
  hgvsp: ENST00000271620.3:c.1050A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6250
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys350Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-151006406-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006406
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006406
    reference: chr 1
allele count: 446
allele frequency: 3.673805601317957e-3
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.353C>G
  hgvsp: ENSP00000357930.1:p.Pro118Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1058C>G
  hgvsp: ENSP00000271620.3:p.Pro353Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.353C>G
  hgvsp: ENSP00000392632.1:p.Pro118Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.422C>G
  hgvsp: ENSP00000271619.8:p.Pro141Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.512C>G
  hgvsp: ENSP00000357932.1:p.Pro171Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.203C>G
  hgvsp: ENSP00000357931.1:p.Pro68Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.353C>G
  hgvsp: ENSP00000357933.1:p.Pro118Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.880C>G
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 9.75e1
  variant carriers: 413
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro353Arg
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-151006410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006410
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006410
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.357G>A
  hgvsp: ENST00000368934.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.357G>A
  hgvsp: ENST00000368937.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.516G>A
  hgvsp: ENST00000368936.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.426G>A
  hgvsp: ENST00000271619.8:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.357G>A
  hgvsp: ENST00000431193.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1062G>A
  hgvsp: ENST00000271620.3:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.884G>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.207G>A
  hgvsp: ENST00000368935.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu354Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

1-151006412-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006412
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006412
    reference: chr 1
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.359T>C
  hgvsp: ENSP00000357930.1:p.Leu120Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.359T>C
  hgvsp: ENSP00000357933.1:p.Leu120Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.428T>C
  hgvsp: ENSP00000271619.8:p.Leu143Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.359T>C
  hgvsp: ENSP00000392632.1:p.Leu120Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.886T>C
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.209T>C
  hgvsp: ENSP00000357931.1:p.Leu70Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.518T>C
  hgvsp: ENSP00000357932.1:p.Leu173Pro
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1064T>C
  hgvsp: ENSP00000271620.3:p.Leu355Pro
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46648
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu355Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-151006413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006413
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006413
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.519C>T
  hgvsp: ENST00000368936.1:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.887C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.360C>T
  hgvsp: ENST00000431193.1:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.360C>T
  hgvsp: ENST00000368937.1:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.360C>T
  hgvsp: ENST00000368934.1:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.210C>T
  hgvsp: ENST00000368935.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1065C>T
  hgvsp: ENST00000271620.3:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.429C>T
  hgvsp: ENST00000271619.8:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6173
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu355Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-151006420-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006420
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006420
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1072G>T
  hgvsp: ENSP00000271620.3:p.Ala358Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.367G>T
  hgvsp: ENSP00000357933.1:p.Ala123Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.894G>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.436G>T
  hgvsp: ENSP00000271619.8:p.Ala146Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.367G>T
  hgvsp: ENSP00000357930.1:p.Ala123Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.217G>T
  hgvsp: ENSP00000357931.1:p.Ala73Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.367G>T
  hgvsp: ENSP00000392632.1:p.Ala123Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.526G>T
  hgvsp: ENSP00000357932.1:p.Ala176Ser
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala358Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-151006430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006430
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.377C>T
  hgvsp: ENSP00000392632.1:p.Ala126Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.536C>T
  hgvsp: ENSP00000357932.1:p.Ala179Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.377C>T
  hgvsp: ENSP00000357933.1:p.Ala126Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.227C>T
  hgvsp: ENSP00000357931.1:p.Ala76Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.377C>T
  hgvsp: ENSP00000357930.1:p.Ala126Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1082C>T
  hgvsp: ENSP00000271620.3:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.904C>T
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.446C>T
  hgvsp: ENSP00000271619.8:p.Ala149Val
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala361Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

1-151006433-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006433
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.449A>G
  hgvsp: ENSP00000271619.8:p.Tyr150Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.380A>G
  hgvsp: ENSP00000392632.1:p.Tyr127Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1085A>G
  hgvsp: ENSP00000271620.3:p.Tyr362Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.907A>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.380A>G
  hgvsp: ENSP00000357933.1:p.Tyr127Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.380A>G
  hgvsp: ENSP00000357930.1:p.Tyr127Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.230A>G
  hgvsp: ENSP00000357931.1:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.539A>G
  hgvsp: ENSP00000357932.1:p.Tyr180Cys
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46650
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr362Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-151006436-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006436
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006436
    reference: chr 1
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.542T>A
  hgvsp: ENSP00000357932.1:p.Phe181Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.910T>A
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.383T>A
  hgvsp: ENSP00000357933.1:p.Phe128Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.233T>A
  hgvsp: ENSP00000357931.1:p.Phe78Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1088T>A
  hgvsp: ENSP00000271620.3:p.Phe363Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.383T>A
  hgvsp: ENSP00000357930.1:p.Phe128Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.383T>A
  hgvsp: ENSP00000392632.1:p.Phe128Tyr
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.452T>A
  hgvsp: ENSP00000271619.8:p.Phe151Tyr
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe363Tyr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

1-151006441-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006441
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006441
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.388T>G
  hgvsp: ENSP00000392632.1:p.Ser130Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.388T>G
  hgvsp: ENSP00000357930.1:p.Ser130Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.547T>G
  hgvsp: ENSP00000357932.1:p.Ser183Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.457T>G
  hgvsp: ENSP00000271619.8:p.Ser153Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143363
  ensembl transcript: ENST00000475722
  gene symbol: PRUNE
  hgvsc: ENST00000475722.1:n.915T>G
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1093T>G
  hgvsp: ENSP00000271620.3:p.Ser365Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.238T>G
  hgvsp: ENSP00000357931.1:p.Ser80Ala
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.388T>G
  hgvsp: ENSP00000357933.1:p.Ser130Ala
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser365Ala
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-151006443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006443
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006443
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.240C>A
  hgvsp: ENST00000368935.1:c.240C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.459C>A
  hgvsp: ENST00000271619.8:c.459C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.390C>A
  hgvsp: ENST00000368937.1:c.390C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.390C>A
  hgvsp: ENST00000431193.1:c.390C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1095C>A
  hgvsp: ENST00000271620.3:c.1095C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.390C>A
  hgvsp: ENST00000368934.1:c.390C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.549C>A
  hgvsp: ENST00000368936.1:c.549C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser365Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-151006444-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006445
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.392dupT
  hgvsp: ENSP00000357930.1:p.Met131IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.461dupT
  hgvsp: ENSP00000271619.8:p.Met154IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1097dupT
  hgvsp: ENSP00000271620.3:p.Met366IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.551dupT
  hgvsp: ENSP00000357932.1:p.Met184IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.242dupT
  hgvsp: ENSP00000357931.1:p.Met81IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.392dupT
  hgvsp: ENSP00000357933.1:p.Met131IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.392dupT
  hgvsp: ENSP00000392632.1:p.Met131IlefsTer9
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46652
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met366IlefsTer9
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-151006444-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006444
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.460A>G
  hgvsp: ENSP00000271619.8:p.Met154Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1096A>G
  hgvsp: ENSP00000271620.3:p.Met366Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.391A>G
  hgvsp: ENSP00000392632.1:p.Met131Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.550A>G
  hgvsp: ENSP00000357932.1:p.Met184Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.391A>G
  hgvsp: ENSP00000357933.1:p.Met131Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.391A>G
  hgvsp: ENSP00000357930.1:p.Met131Val
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.241A>G
  hgvsp: ENSP00000357931.1:p.Met81Val
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6147
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met366Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

1-151006451-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006451
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006451
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.398T>G
  hgvsp: ENSP00000357933.1:p.Ile133Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.557T>G
  hgvsp: ENSP00000357932.1:p.Ile186Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.398T>G
  hgvsp: ENSP00000392632.1:p.Ile133Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1103T>G
  hgvsp: ENSP00000271620.3:p.Ile368Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.248T>G
  hgvsp: ENSP00000357931.1:p.Ile83Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.398T>G
  hgvsp: ENSP00000357930.1:p.Ile133Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.467T>G
  hgvsp: ENSP00000271619.8:p.Ile156Ser
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile368Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-151006457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006457
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006457
    reference: chr 1
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.473C>T
  hgvsp: ENSP00000271619.8:p.Ser158Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.563C>T
  hgvsp: ENSP00000357932.1:p.Ser188Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.404C>T
  hgvsp: ENSP00000357930.1:p.Ser135Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.254C>T
  hgvsp: ENSP00000357931.1:p.Ser85Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.404C>T
  hgvsp: ENSP00000392632.1:p.Ser135Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1109C>T
  hgvsp: ENSP00000271620.3:p.Ser370Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.404C>T
  hgvsp: ENSP00000357933.1:p.Ser135Leu
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser370Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

1-151006459-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006459
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006459
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.406G>A
  hgvsp: ENSP00000357930.1:p.Gly136Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.406G>A
  hgvsp: ENSP00000392632.1:p.Gly136Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1111G>A
  hgvsp: ENSP00000271620.3:p.Gly371Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.565G>A
  hgvsp: ENSP00000357932.1:p.Gly189Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.256G>A
  hgvsp: ENSP00000357931.1:p.Gly86Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.475G>A
  hgvsp: ENSP00000271619.8:p.Gly159Arg
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.406G>A
  hgvsp: ENSP00000357933.1:p.Gly136Arg
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly371Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-151006464-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006464
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006464
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.480G>T
  hgvsp: ENSP00000271619.8:p.Gln160His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.261G>T
  hgvsp: ENSP00000357931.1:p.Gln87His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.570G>T
  hgvsp: ENSP00000357932.1:p.Gln190His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.411G>T
  hgvsp: ENSP00000357930.1:p.Gln137His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1116G>T
  hgvsp: ENSP00000271620.3:p.Gln372His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.411G>T
  hgvsp: ENSP00000392632.1:p.Gln137His
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.411G>T
  hgvsp: ENSP00000357933.1:p.Gln137His
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln372His
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

1-151006484-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006484
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006484
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.431C>T
  hgvsp: ENSP00000357933.1:p.Ser144Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.431C>T
  hgvsp: ENSP00000357930.1:p.Ser144Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.500C>T
  hgvsp: ENSP00000271619.8:p.Ser167Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.590C>T
  hgvsp: ENSP00000357932.1:p.Ser197Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.281C>T
  hgvsp: ENSP00000357931.1:p.Ser94Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.431C>T
  hgvsp: ENSP00000392632.1:p.Ser144Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1136C>T
  hgvsp: ENSP00000271620.3:p.Ser379Phe
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser379Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-151006486-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006486
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006486
    reference: chr 1
allele count: 12
allele frequency: 9.885493038965319e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.502A>G
  hgvsp: ENSP00000271619.8:p.Arg168Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.592A>G
  hgvsp: ENSP00000357932.1:p.Arg198Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.283A>G
  hgvsp: ENSP00000357931.1:p.Arg95Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1138A>G
  hgvsp: ENSP00000271620.3:p.Arg380Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.433A>G
  hgvsp: ENSP00000357933.1:p.Arg145Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.433A>G
  hgvsp: ENSP00000357930.1:p.Arg145Gly
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.433A>G
  hgvsp: ENSP00000392632.1:p.Arg145Gly
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46663
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg380Gly
num of homozygotes: 1
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-151006491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006491
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1143G>A
  hgvsp: ENST00000271620.3:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.288G>A
  hgvsp: ENST00000368935.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.438G>A
  hgvsp: ENST00000368937.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.507G>A
  hgvsp: ENST00000271619.8:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.597G>A
  hgvsp: ENST00000368936.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.438G>A
  hgvsp: ENST00000431193.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.438G>A
  hgvsp: ENST00000368934.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46663
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu381Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

1-151006497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006497
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006497
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.294G>A
  hgvsp: ENST00000368935.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1149G>A
  hgvsp: ENST00000271620.3:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.444G>A
  hgvsp: ENST00000368934.1:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.513G>A
  hgvsp: ENST00000271619.8:c.513G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.444G>A
  hgvsp: ENST00000368937.1:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.444G>A
  hgvsp: ENST00000431193.1:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.603G>A
  hgvsp: ENST00000368936.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46664
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val383Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-151006498-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006498
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006498
    reference: chr 1
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.445G>A
  hgvsp: ENSP00000357930.1:p.Asp149Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.445G>A
  hgvsp: ENSP00000357933.1:p.Asp149Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.604G>A
  hgvsp: ENSP00000357932.1:p.Asp202Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1150G>A
  hgvsp: ENSP00000271620.3:p.Asp384Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.295G>A
  hgvsp: ENSP00000357931.1:p.Asp99Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.514G>A
  hgvsp: ENSP00000271619.8:p.Asp172Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.445G>A
  hgvsp: ENSP00000392632.1:p.Asp149Asn
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp384Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

1-151006518-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006518
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006518
    reference: chr 1
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.465A>G
  hgvsp: ENST00000368934.1:c.465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.465A>G
  hgvsp: ENST00000368937.1:c.465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.534A>G
  hgvsp: ENST00000271619.8:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.624A>G
  hgvsp: ENST00000368936.1:c.624A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.465A>G
  hgvsp: ENST00000431193.1:c.465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1170A>G
  hgvsp: ENST00000271620.3:c.1170A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.315A>G
  hgvsp: ENST00000368935.1:c.315A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala390Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum

1-151006520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006520
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006520
    reference: chr 1
allele count: 20
allele frequency: 1.647500741375334e-4
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1172G>A
  hgvsp: ENSP00000271620.3:p.Ser391Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.626G>A
  hgvsp: ENSP00000357932.1:p.Ser209Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.467G>A
  hgvsp: ENSP00000357933.1:p.Ser156Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.536G>A
  hgvsp: ENSP00000271619.8:p.Ser179Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.317G>A
  hgvsp: ENSP00000357931.1:p.Ser106Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.467G>A
  hgvsp: ENSP00000357930.1:p.Ser156Asn
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.467G>A
  hgvsp: ENSP00000392632.1:p.Ser156Asn
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46676
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser391Asn
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-151006526-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006526
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006526
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.542C>T
  hgvsp: ENSP00000271619.8:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.323C>T
  hgvsp: ENSP00000357931.1:p.Ser108Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.473C>T
  hgvsp: ENSP00000357930.1:p.Ser158Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.632C>T
  hgvsp: ENSP00000357932.1:p.Ser211Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.473C>T
  hgvsp: ENSP00000357933.1:p.Ser158Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.473C>T
  hgvsp: ENSP00000392632.1:p.Ser158Phe
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1178C>T
  hgvsp: ENSP00000271620.3:p.Ser393Phe
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46675
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser393Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-151006537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006537
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006537
    reference: chr 1
allele count: 4446
allele frequency: 3.66342018094626e-2
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.484G>A
  hgvsp: ENSP00000357930.1:p.Gly162Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.643G>A
  hgvsp: ENSP00000357932.1:p.Gly215Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.484G>A
  hgvsp: ENSP00000392632.1:p.Gly162Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.484G>A
  hgvsp: ENSP00000357933.1:p.Gly162Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.553G>A
  hgvsp: ENSP00000271619.8:p.Gly185Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.334G>A
  hgvsp: ENSP00000357931.1:p.Gly112Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1189G>A
  hgvsp: ENSP00000271620.3:p.Gly397Ser
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 7.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 9.75e1
  variant carriers: 3042
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 7.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 9.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 8.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 8.75e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 6.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47371
  bin: 9.75e1
  variant carriers: 3828
hgvs: p.Gly397Ser
num of homozygotes: 610
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/1-151006539-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006539
    reference: chr 1
allele count: 102659
allele frequency: 8.457096253336409e-1
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.645C>A
  hgvsp: ENST00000368936.1:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.486C>A
  hgvsp: ENST00000431193.1:c.486C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.555C>A
  hgvsp: ENST00000271619.8:c.555C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.486C>A
  hgvsp: ENST00000368937.1:c.486C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.336C>A
  hgvsp: ENST00000368935.1:c.336C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.486C>A
  hgvsp: ENST00000368934.1:c.486C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1191C>A
  hgvsp: ENST00000271620.3:c.1191C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 390
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 8.75e1
  variant carriers: 1970
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.25e1
  variant carriers: 406
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 2.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.75e1
  variant carriers: 362
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.25e1
  variant carriers: 451
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 468
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 8.25e1
  variant carriers: 1487
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.75e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 437
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.25e1
  variant carriers: 813
genotype depth: GenotypeDepth
  all individuals: 46945
  bin: 9.75e1
  variant carriers: 46873
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.25e1
  variant carriers: 2312
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.75e1
  variant carriers: 1192
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 6.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.25e1
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 31
hgvs: p.Gly397Gly
num of homozygotes: 43558
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-151006539-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006539
    reference: chr 1
allele count: 122
allele frequency: 1.005041684515768e-3
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1191C>G
  hgvsp: ENST00000271620.3:c.1191C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.336C>G
  hgvsp: ENST00000368935.1:c.336C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.486C>G
  hgvsp: ENST00000368934.1:c.486C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.486C>G
  hgvsp: ENST00000431193.1:c.486C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.645C>G
  hgvsp: ENST00000368936.1:c.645C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.555C>G
  hgvsp: ENST00000271619.8:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.486C>G
  hgvsp: ENST00000368937.1:c.486C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46945
  bin: 9.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly397Gly
num of homozygotes: 2
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

1-151006552-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006552
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006552
    reference: chr 1
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.499G>C
  hgvsp: ENSP00000357933.1:p.Glu167Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.499G>C
  hgvsp: ENSP00000357930.1:p.Glu167Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.568G>C
  hgvsp: ENSP00000271619.8:p.Glu190Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.658G>C
  hgvsp: ENSP00000357932.1:p.Glu220Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.349G>C
  hgvsp: ENSP00000357931.1:p.Glu117Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.499G>C
  hgvsp: ENSP00000392632.1:p.Glu167Gln
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1204G>C
  hgvsp: ENSP00000271620.3:p.Glu402Gln
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3709
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3486
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu402Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-151006554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006554
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006554
    reference: chr 1
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.570G>A
  hgvsp: ENST00000271619.8:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.501G>A
  hgvsp: ENST00000431193.1:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1206G>A
  hgvsp: ENST00000271620.3:c.1206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.501G>A
  hgvsp: ENST00000368934.1:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.501G>A
  hgvsp: ENST00000368937.1:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.351G>A
  hgvsp: ENST00000368935.1:c.351G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.660G>A
  hgvsp: ENST00000368936.1:c.660G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu402Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

1-151006561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006561
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006561
    reference: chr 1
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.508C>T
  hgvsp: ENSP00000357933.1:p.Pro170Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.508C>T
  hgvsp: ENSP00000392632.1:p.Pro170Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1213C>T
  hgvsp: ENSP00000271620.3:p.Pro405Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.358C>T
  hgvsp: ENSP00000357931.1:p.Pro120Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.577C>T
  hgvsp: ENSP00000271619.8:p.Pro193Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.508C>T
  hgvsp: ENSP00000357930.1:p.Pro170Ser
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.667C>T
  hgvsp: ENSP00000357932.1:p.Pro223Ser
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro405Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS

1-151006565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151006565
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 151006565
    reference: chr 1
allele count: 2
allele frequency: 1.648695881557688e-5
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357932
  ensembl transcript: ENST00000368936
  gene symbol: PRUNE
  hgvsc: ENST00000368936.1:c.671C>T
  hgvsp: ENSP00000357932.1:p.Pro224Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357930
  ensembl transcript: ENST00000368934
  gene symbol: PRUNE
  hgvsc: ENST00000368934.1:c.512C>T
  hgvsp: ENSP00000357930.1:p.Pro171Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000392632
  ensembl transcript: ENST00000431193
  gene symbol: PRUNE
  hgvsc: ENST00000431193.1:c.512C>T
  hgvsp: ENSP00000392632.1:p.Pro171Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271620
  ensembl transcript: ENST00000271620
  gene symbol: PRUNE
  hgvsc: ENST00000271620.3:c.1217C>T
  hgvsp: ENSP00000271620.3:p.Pro406Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357931
  ensembl transcript: ENST00000368935
  gene symbol: PRUNE
  hgvsc: ENST00000368935.1:c.362C>T
  hgvsp: ENSP00000357931.1:p.Pro121Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000271619
  ensembl transcript: ENST00000271619
  gene symbol: PRUNE
  hgvsc: ENST00000271619.8:c.581C>T
  hgvsp: ENSP00000271619.8:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/13420
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143363
  ensembl protein: ENSP00000357933
  ensembl transcript: ENST00000368937
  gene symbol: PRUNE
  hgvsc: ENST00000368937.1:c.512C>T
  hgvsp: ENSP00000357933.1:p.Pro171Leu
  variant of: http://identifiers.org/hgnc/13420
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29315
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro406Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

GenotypeQuality
all individuals: 769
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3433
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6456
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.622516556291391e-5
allele num: 15100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.198e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.891e0

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 1.837731e6

GenotypeQuality
all individuals: 6452
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51758885482745e-5
allele num: 65894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

DP
type: SiteQuality
SIO_000300: 1.823219e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 1.475e1

FS
type: SiteQuality
SIO_000300: 3.537e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.309e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6447
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14954
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.01e-2

DP
type: SiteQuality
SIO_000300: 1.806547e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.37e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2068
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6453
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 174
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7926
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.378834977699689e-4
allele num: 14798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.561072764314167e-5
allele num: 65774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.767985e6

QD
type: SiteQuality
SIO_000300: 1.235e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
all individuals: 7885
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2068
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23140
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 7.155e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.67e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 1.767109e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65744
num of homozygotes: 0

South Asian
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allele num: 14706
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QD
type: SiteQuality
SIO_000300: 1.153e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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SIO_000300: 1.83e0

BaseQRankSum
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SIO_000300: -2.618e0

FS
type: SiteQuality
SIO_000300: 4.843e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.765898e6

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 14706
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
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European (Non-Finnish)
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allele count: 7
allele frequency: 1.06473594548552e-4
allele num: 65744
num of homozygotes: 0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
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SIO_000300: -2.618e0

FS
type: SiteQuality
SIO_000300: 4.843e0

DP
type: SiteQuality
SIO_000300: 1.765898e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528304193666707e-5
allele num: 65432
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 6.576e0

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

BaseQRankSum
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SIO_000300: 9.52e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.142e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

DP
type: SiteQuality
SIO_000300: 1.675091e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.824567596187787e-5
allele num: 11332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.419e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 1.145e1

DP
type: SiteQuality
SIO_000300: 1.645021e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.99e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538272212650751e-5
allele num: 65008
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.824567596187787e-5
allele num: 11332
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.796238244514106e-5
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13838
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 1.2927e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.51e1

DP
type: SiteQuality
SIO_000300: 1.640215e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 7.099247479767145e-5
allele num: 14086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65464
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6590
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
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allele count: 13
allele frequency: 9.197679354747418e-4
allele num: 14134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.051478441304812e-5
allele num: 65542
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.277684e6

VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.576240161083654e-5
allele num: 65556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9904
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Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14170
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
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Other
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allele frequency: 0.0e0
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QD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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SIO_000300: 1.78e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 2
allele frequency: 2.352387673488591e-4
allele num: 8502
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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SIO_000300: 5.9e0

ClippingRankSum
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SIO_000300: -6.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9990
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14722
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520958812435359e-5
allele num: 65748
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 7.67e-1

BaseQRankSum
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SIO_000300: -4.494e0

FS
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MQ
type: SiteQuality
SIO_000300: 5.997e1

MQRankSum
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QD
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VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 12
allele frequency: 7.931262392597488e-4
allele num: 15130
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.217391304347826e-4
allele num: 11500
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8528
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
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allele count: 28
allele frequency: 4.247830572243461e-4
allele num: 65916
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10072
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Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
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MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

FS
type: SiteQuality
SIO_000300: 7.7e-1

DP
type: SiteQuality
SIO_000300: 3.318409e6

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.172607879924953e-4
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65932
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 4.27e-1

ReadPosRankSum
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VQSLOD
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QD
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.877e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
type: Population
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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South Asian
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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Latino
type: Population
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African
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East Asian
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European (Finnish)
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allele num: 6596
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South Asian
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European (Non-Finnish)
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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African
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South Asian
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Latino
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Other
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East Asian
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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DP
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MQ
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FS
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.513775355737209e-4
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66592
num of homozygotes: 0

East Asian
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Latino
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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DP
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 3.037667071688943e-4
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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East Asian
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VQSLOD
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ClippingRankSum
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MQ
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BaseQRankSum
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele num: 10378
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South Asian
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MQ
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SIO_000300: 5.934e1

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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FS
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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African
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Latino
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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QD
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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BaseQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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QD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.332364341085271e-3
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
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ClippingRankSum
type: SiteQuality
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DP
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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SIO_000300: 5.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Latino
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East Asian
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allele num: 8654
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European (Finnish)
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MQRankSum
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DP
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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Latino
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European (Finnish)
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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African
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Other
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East Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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South Asian
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Latino
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DP
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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Other
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European (Finnish)
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African
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BaseQRankSum
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QD
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SIO_000300: 1.378e1

FS
type: SiteQuality
SIO_000300: 3.929e0

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.12e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 3.377176e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.279e1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

FS
type: SiteQuality
SIO_000300: 1.4183e1

DP
type: SiteQuality
SIO_000300: 3.377151e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.361e0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 445

GenotypeQuality
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variant carriers: 0

African
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allele count: 9
allele frequency: 8.652182272639877e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 400
allele frequency: 5.993586862057598e-3
allele num: 66738
num of homozygotes: 1

Latino
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allele count: 4
allele frequency: 3.456022118541559e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.029554263565892e-3
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 15
allele frequency: 2.267916540671303e-3
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

DP
type: SiteQuality
SIO_000300: 3.424961e6

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.31e-1

MQ
type: SiteQuality
SIO_000300: 5.991e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.004e0

QD
type: SiteQuality
SIO_000300: 1.148e1

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 3.403215e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.533e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

DP
type: SiteQuality
SIO_000300: 3.403388e6

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46648
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

FS
type: SiteQuality
SIO_000300: 1.865e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -7.044e0

DP
type: SiteQuality
SIO_000300: 3.403374e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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FS
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BaseQRankSum
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MQ
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SIO_000300: 5.988e1

DP
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VQSLOD
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.403149e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ClippingRankSum
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MQ
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

FS
type: SiteQuality
SIO_000300: 3.63e0

MQ
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.035e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 6160
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variant carriers: 0

South Asian
type: Population
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allele frequency: 2.422480620155039e-4
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African
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
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VQSLOD
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FS
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MQ
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MQRankSum
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DP
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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Latino
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East Asian
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MQRankSum
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FS
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MQ
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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East Asian
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allele frequency: 0.0e0
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Latino
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South Asian
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num of homozygotes: 0

European (Finnish)
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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ClippingRankSum
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QD
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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DP
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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African
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European (Non-Finnish)
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South Asian
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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East Asian
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African
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Other
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DP
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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QD
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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SIO_000300: 7.43e-1

DP
type: SiteQuality
SIO_000300: 3.403631e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.028e0

QD
type: SiteQuality
SIO_000300: 1.705e1

GenotypeQuality
all individuals: 1930
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 1253
bin: 9.25e1
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GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.267441860465116e-4
allele num: 16512
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.758e0

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.08e-2

DP
type: SiteQuality
SIO_000300: 3.404911e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.201e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 3.404514e6

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.247e0

VQSLOD
type: SiteQuality
SIO_000300: -9.48e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
SIO_000300: 1.209e1

DP
type: SiteQuality
SIO_000300: 3.404595e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.817e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6144
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.324e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

FS
type: SiteQuality
SIO_000300: 8.192e0

DP
type: SiteQuality
SIO_000300: 3.404805e6

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 43
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 1255
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variant carriers: 0

GenotypeQuality
all individuals: 46668
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.032e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 3.322e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.405196e6

MQ
type: SiteQuality
SIO_000300: 5.908e1

QD
type: SiteQuality
SIO_000300: 1.108e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1365
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GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198825151351675e-4
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 5.819e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.226e0

MQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.241e-1

DP
type: SiteQuality
SIO_000300: 3.406737e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 3.827e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.406631e6

QD
type: SiteQuality
SIO_000300: 1.309e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1191
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 8
allele frequency: 7.693787266782073e-4
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 151
allele frequency: 2.263053773754571e-3
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 781
allele frequency: 6.746717346233587e-2
allele num: 11576
num of homozygotes: 24

European (Finnish)
type: Population
allele count: 15
allele frequency: 2.267916540671303e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 3158
allele frequency: 3.658480074142725e-1
allele num: 8632
num of homozygotes: 575

South Asian
type: Population
allele count: 310
allele frequency: 1.877422480620155e-2
allele num: 16512
num of homozygotes: 11

Other
type: Population
allele count: 23
allele frequency: 2.538631346578367e-2
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.829e1

DP
type: SiteQuality
SIO_000300: 3.641626e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.443e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.96e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 43

GenotypeQuality
all individuals: 421
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 8
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variant carriers: 8

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 59165
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GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 207
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variant carriers: 110

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 3
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variant carriers: 3

East Asian
type: Population
allele count: 7523
allele frequency: 8.703146691346599e-1
allele num: 8644
num of homozygotes: 3284

European (Finnish)
type: Population
allele count: 5467
allele frequency: 8.265799818566677e-1
allele num: 6614
num of homozygotes: 2260

African
type: Population
allele count: 8526
allele frequency: 8.194925028835064e-1
allele num: 10404
num of homozygotes: 3509

Latino
type: Population
allele count: 10075
allele frequency: 8.703351762266759e-1
allele num: 11576
num of homozygotes: 4397

European (Non-Finnish)
type: Population
allele count: 57119
allele frequency: 8.559718267645736e-1
allele num: 66730
num of homozygotes: 24474

South Asian
type: Population
allele count: 13192
allele frequency: 7.989341085271318e-1
allele num: 16512
num of homozygotes: 5319

Other
type: Population
allele count: 757
allele frequency: 8.337004405286343e-1
allele num: 908
num of homozygotes: 315

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

QD
type: SiteQuality
SIO_000300: 2.855e1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

DP
type: SiteQuality
SIO_000300: 7.494675e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.455e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59165
bin: 9.75e1
variant carriers: 120

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 122
allele frequency: 1.411383618695049e-2
allele num: 8644
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.455e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.855e1

DP
type: SiteQuality
SIO_000300: 7.494675e6

GenotypeQuality
all individuals: 1872
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29323
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999040307101727e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -1.935e0

FS
type: SiteQuality
SIO_000300: 2.652e0

DP
type: SiteQuality
SIO_000300: 2.871407e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 2.575e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.196e0

GenotypeQuality
all individuals: 4647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29323
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.870974e6

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 1.1737e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 2.832e1

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.247e0

GenotypeQuality
all individuals: 11165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3702
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29321
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3772
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.756e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

MQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

DP
type: SiteQuality
SIO_000300: 2.869879e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.064e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 8.241e0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.018e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

DP
type: SiteQuality
SIO_000300: 2.868903e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1